RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 TTC28Q96AY4 2481 aa12.39□□□□□ -0.43
UBR3-201ENST00000272793 CSDC2Q9Y534 153 aaKnown RBP12.39□□□□□ -0.43
UBR3-201ENST00000272793 NANOS2P60321 138 aaKnown RBP12.39□□□□□ -0.43
UBR3-201ENST00000272793 LINC00643Q86TS7 51 aa12.38□□□□□ -0.43
UBR3-201ENST00000272793 IGHV1-69DA0A0B4J2H0 117 aa12.38□□□□□ -0.43
UBR3-201ENST00000272793 IGHV1-69P01742 117 aa12.38□□□□□ -0.43
UBR3-201ENST00000272793 TRBV27A0A0K0K1C4 114 aa12.38□□□□□ -0.43
UBR3-201ENST00000272793 C1orf158Q8N1D5 194 aa12.38□□□□□ -0.43
UBR3-201ENST00000272793 IGF1P05019 195 aa12.38□□□□□ -0.43
UBR3-201ENST00000272793 Q0VFX4 171 aa12.38□□□□□ -0.43
UBR3-201ENST00000272793 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.37□□□□□ -0.43
UBR3-201ENST00000272793 GLI3P10071 1580 aa12.37□□□□□ -0.43
UBR3-201ENST00000272793 YPEL3P61236 119 aaPredicted RBP12.36□□□□□ -0.43
UBR3-201ENST00000272793 IGKV1-17P01599 117 aa12.36□□□□□ -0.43
UBR3-201ENST00000272793 DEFB4AO15263 64 aa12.35□□□□□ -0.43
UBR3-201ENST00000272793 FAM19A1Q7Z5A9 133 aa12.35□□□□□ -0.43
UBR3-201ENST00000272793 LTBP4Q8N2S1 1624 aa12.35□□□□□ -0.43
UBR3-201ENST00000272793 GP9P14770 177 aa12.34□□□□□ -0.43
UBR3-201ENST00000272793 Q6P435 159 aa12.34□□□□□ -0.43
UBR3-201ENST00000272793 H3BRN7 92 aa12.34□□□□□ -0.43
UBR3-201ENST00000272793 ADAMTS7Q9UKP4 1686 aa12.34□□□□□ -0.43
UBR3-201ENST00000272793 EPOPA6NHQ4 379 aa12.34□□□□□ -0.43
UBR3-201ENST00000272793 C14orf177Q52M58 125 aa12.34□□□□□ -0.43
UBR3-201ENST00000272793 RNASE8Q8TDE3 154 aaKnown RBP12.34□□□□□ -0.43
UBR3-201ENST00000272793 IGKV1D-17A0A075B6S4 117 aa12.34□□□□□ -0.43
UBR3-201ENST00000272793 C16orf54Q6UWD8 224 aa12.34□□□□□ -0.43
UBR3-201ENST00000272793 RPL39P62891 51 aaKnown RBP12.33□□□□□ -0.44
UBR3-201ENST00000272793 NDUFA4L2Q9NRX3 87 aa12.33□□□□□ -0.44
UBR3-201ENST00000272793 LYRM9A8MSI8 78 aa12.33□□□□□ -0.44
UBR3-201ENST00000272793 CRYGDP07320 174 aa12.33□□□□□ -0.44
UBR3-201ENST00000272793 AHDC1Q5TGY3 1603 aaPredicted RBP12.33□□□□□ -0.44
UBR3-201ENST00000272793 FAM120AOSQ5T036 256 aa12.32□□□□□ -0.44
UBR3-201ENST00000272793 BLCAPP62952 87 aa12.32□□□□□ -0.44
UBR3-201ENST00000272793 FHL1Q13642 323 aa12.32□□□□□ -0.44
UBR3-201ENST00000272793 IGHV2-5P01817 119 aa12.32□□□□□ -0.44
UBR3-201ENST00000272793 FXYD2P54710 66 aa12.32□□□□□ -0.44
UBR3-201ENST00000272793 SLURP1P55000 103 aa12.31□□□□□ -0.44
UBR3-201ENST00000272793 PTH2Q96A98 100 aa12.31□□□□□ -0.44
UBR3-201ENST00000272793 XAGE1AQ9HD64 81 aa12.31□□□□□ -0.44
UBR3-201ENST00000272793 TDRG1Q3Y452 100 aa12.31□□□□□ -0.44
UBR3-201ENST00000272793 KAAG1Q9UBP8 84 aa12.31□□□□□ -0.44
UBR3-201ENST00000272793 NRXN2Q9P2S2 1712 aa12.31□□□□□ -0.44
UBR3-201ENST00000272793 E7EQL1 145 aa12.31□□□□□ -0.44
UBR3-201ENST00000272793 ADAMTS20P59510 1910 aa12.31□□□□□ -0.44
UBR3-201ENST00000272793 WFDC10AQ9H1F0 79 aa12.31□□□□□ -0.44
UBR3-201ENST00000272793 ZNF726P1Q15940 193 aa12.31□□□□□ -0.44
UBR3-201ENST00000272793 ZNF747Q9BV97 191 aa12.3□□□□□ -0.44
UBR3-201ENST00000272793 CCDC168Q8NDH2 2452 aa12.3□□□□□ -0.44
UBR3-201ENST00000272793 WFDC13Q8IUB5 93 aa12.3□□□□□ -0.44
UBR3-201ENST00000272793 FAM19A3Q7Z5A8 133 aa12.3□□□□□ -0.44
UBR3-201ENST00000272793 IGHV1-58A0A0C4DH39 117 aa12.3□□□□□ -0.44
UBR3-201ENST00000272793 UBE2D2P62837 147 aa12.3□□□□□ -0.44
UBR3-201ENST00000272793 C7orf33Q8WU49 177 aa12.3□□□□□ -0.44
UBR3-201ENST00000272793 UNQ6494/PRO21346Q6UXR6 183 aa12.3□□□□□ -0.44
UBR3-201ENST00000272793 POM121L12Q8N7R1 296 aa12.3□□□□□ -0.44
UBR3-201ENST00000272793 ACANP16112 2415 aa12.29□□□□□ -0.44
UBR3-201ENST00000272793 SLPIP03973 132 aa12.29□□□□□ -0.44
UBR3-201ENST00000272793 FXYD5Q96DB9 178 aa12.29□□□□□ -0.44
UBR3-201ENST00000272793 TRBV7-6A0A0J9YX20 115 aa12.29□□□□□ -0.44
UBR3-201ENST00000272793 TMEM14CQ9P0S9 112 aa12.29□□□□□ -0.44
UBR3-201ENST00000272793 COL24A1Q17RW2 1714 aa12.29□□□□□ -0.44
UBR3-201ENST00000272793 IGLV9-49A0A0B4J1Y8 123 aa12.28□□□□□ -0.44
UBR3-201ENST00000272793 SLX1AQ9BQ83 275 aa12.28□□□□□ -0.44
UBR3-201ENST00000272793 A0A0J9YXV3 536 aa12.27□□□□□ -0.44
UBR3-201ENST00000272793 TCL1BO95988 128 aa12.27□□□□□ -0.44
UBR3-201ENST00000272793 Q8NFD4 153 aa12.27□□□□□ -0.45
UBR3-201ENST00000272793 K7EN84 100 aa12.27□□□□□ -0.45
UBR3-201ENST00000272793 IGF2-ASQ6U949 168 aa12.27□□□□□ -0.45
UBR3-201ENST00000272793 MT-ATP8P03928 68 aa12.26□□□□□ -0.45
UBR3-201ENST00000272793 MED14OSP0DP75 135 aa12.26□□□□□ -0.45
UBR3-201ENST00000272793 WT1P19544 449 aaPredicted RBP12.26□□□□□ -0.45
UBR3-201ENST00000272793 QRFPP83859 136 aa12.26□□□□□ -0.45
UBR3-201ENST00000272793 DEFB135Q30KP9 77 aa12.26□□□□□ -0.45
UBR3-201ENST00000272793 COA6Q5JTJ3 125 aaKnown RBP12.26□□□□□ -0.45
UBR3-201ENST00000272793 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.26□□□□□ -0.45
UBR3-201ENST00000272793 TMEM223A0PJW6 202 aa12.26□□□□□ -0.45
UBR3-201ENST00000272793 PSPHP1O15172 72 aa12.26□□□□□ -0.45
UBR3-201ENST00000272793 SPINT4Q6UDR6 99 aa12.26□□□□□ -0.45
UBR3-201ENST00000272793 CCKP06307 115 aa12.25□□□□□ -0.45
UBR3-201ENST00000272793 CSRP3P50461 194 aa12.25□□□□□ -0.45
UBR3-201ENST00000272793 LINC00173Q6ZV60 143 aa12.25□□□□□ -0.45
UBR3-201ENST00000272793 RETNLBQ9BQ08 111 aa12.25□□□□□ -0.45
UBR3-201ENST00000272793 TPSG1Q9NRR2 321 aa12.25□□□□□ -0.45
UBR3-201ENST00000272793 ZNF833PQ6ZTB9 187 aa12.24□□□□□ -0.45
UBR3-201ENST00000272793 FAM19A5Q7Z5A7 132 aaPredicted RBP12.24□□□□□ -0.45
UBR3-201ENST00000272793 SOSTDC1Q6X4U4 206 aa12.24□□□□□ -0.45
UBR3-201ENST00000272793 SPINK1P00995 79 aa12.24□□□□□ -0.45
UBR3-201ENST00000272793 FLG2Q5D862 2391 aaPredicted RBP12.24□□□□□ -0.45
UBR3-201ENST00000272793 PPDPFQ9H3Y8 114 aa12.24□□□□□ -0.45
UBR3-201ENST00000272793 COL5A1P20908 1838 aaPredicted RBP12.23□□□□□ -0.45
UBR3-201ENST00000272793 SIP14410 1827 aa12.23□□□□□ -0.45
UBR3-201ENST00000272793 NDUFA7O95182 113 aa12.23□□□□□ -0.45
UBR3-201ENST00000272793 C22orf34Q6ZV56 151 aa12.23□□□□□ -0.45
UBR3-201ENST00000272793 J3QLI3 93 aa12.23□□□□□ -0.45
UBR3-201ENST00000272793 MYO9AB2RTY4 2548 aa12.23□□□□□ -0.45
UBR3-201ENST00000272793 LOXP28300 417 aaPredicted RBP12.23□□□□□ -0.45
UBR3-201ENST00000272793 DCANP1Q8TF63 244 aa12.22□□□□□ -0.45
UBR3-201ENST00000272793 LINC00269Q8N2A0 174 aa12.21□□□□□ -0.45
UBR3-201ENST00000272793 K7EM74 188 aa12.21□□□□□ -0.45
UBR3-201ENST00000272793 NFE4Q86UQ8 179 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms