RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 EEF1AKMT3Q96AZ1 226 aa12.86□□□□□ -0.35
LRRC56-201ENST00000270115 ICOSQ9Y6W8 199 aa12.86□□□□□ -0.35
LRRC56-201ENST00000270115 C9orf139Q6ZV77 190 aa12.86□□□□□ -0.35
LRRC56-201ENST00000270115 IGHV4OR15-8A0A075B7B6 117 aa12.86□□□□□ -0.35
LRRC56-201ENST00000270115 A0A087WW49 117 aa12.86□□□□□ -0.35
LRRC56-201ENST00000270115 CD3EP07766 207 aa12.86□□□□□ -0.35
LRRC56-201ENST00000270115 LINC01587Q99440 93 aa12.86□□□□□ -0.35
LRRC56-201ENST00000270115 ZFHX3Q15911 3703 aa12.85□□□□□ -0.35
LRRC56-201ENST00000270115 PIEZO1Q92508 2521 aa12.85□□□□□ -0.35
LRRC56-201ENST00000270115 LINC01560Q8TB33 94 aa12.85□□□□□ -0.35
LRRC56-201ENST00000270115 U3KQE9 123 aa12.85□□□□□ -0.35
LRRC56-201ENST00000270115 FAM236AA0A1B0GUQ0 79 aa12.84□□□□□ -0.35
LRRC56-201ENST00000270115 FAM236BA0A1B0GV22 79 aa12.84□□□□□ -0.35
LRRC56-201ENST00000270115 ADAMTSL4-AS1Q5T5F5 129 aa12.83□□□□□ -0.36
LRRC56-201ENST00000270115 UNQ9165/PRO28630Q6UXU0 137 aa12.83□□□□□ -0.36
LRRC56-201ENST00000270115 TRGV11A0A075B6L2 103 aa12.83□□□□□ -0.36
LRRC56-201ENST00000270115 POM121L12Q8N7R1 296 aa12.83□□□□□ -0.36
LRRC56-201ENST00000270115 PRRC2AP48634 2157 aaKnown RBP12.83□□□□□ -0.36
LRRC56-201ENST00000270115 TRAV8-3A0A0A6YYJ7 113 aa12.82□□□□□ -0.36
LRRC56-201ENST00000270115 ATP5J2P56134 94 aa12.82□□□□□ -0.36
LRRC56-201ENST00000270115 CEMP1Q6PRD7 247 aaPredicted RBP12.82□□□□□ -0.36
LRRC56-201ENST00000270115 OVOL1O14753 267 aa12.82□□□□□ -0.36
LRRC56-201ENST00000270115 YAE1D1Q9NRH1 226 aa12.82□□□□□ -0.36
LRRC56-201ENST00000270115 M0R1W7 72 aa12.81□□□□□ -0.36
LRRC56-201ENST00000270115 COX6CP09669 75 aa12.81□□□□□ -0.36
LRRC56-201ENST00000270115 IGHV3-30-3P0DP02 117 aa12.81□□□□□ -0.36
LRRC56-201ENST00000270115 MED14OSP0DP75 135 aa12.81□□□□□ -0.36
LRRC56-201ENST00000270115 EBI3Q14213 229 aa12.81□□□□□ -0.36
LRRC56-201ENST00000270115 ANKHD1Q8IWZ3 2542 aaKnown RBP12.81□□□□□ -0.36
LRRC56-201ENST00000270115 TRBV27A0A0K0K1C4 114 aa12.81□□□□□ -0.36
LRRC56-201ENST00000270115 LINC01600Q96MT4 127 aa12.81□□□□□ -0.36
LRRC56-201ENST00000270115 A8MZ25 164 aa12.81□□□□□ -0.36
LRRC56-201ENST00000270115 H3BT86 120 aa12.81□□□□□ -0.36
LRRC56-201ENST00000270115 TMEM126AQ9H061 195 aa12.81□□□□□ -0.36
LRRC56-201ENST00000270115 SPANXA1Q9NS26 97 aa12.81□□□□□ -0.36
LRRC56-201ENST00000270115 TRBV7-1A0A0A6YYK4 115 aa12.8□□□□□ -0.36
LRRC56-201ENST00000270115 TRBV12-3P01733 135 aa12.8□□□□□ -0.36
LRRC56-201ENST00000270115 LINC00694P0DN24 101 aa12.8□□□□□ -0.36
LRRC56-201ENST00000270115 LITAFQ99732 161 aa12.8□□□□□ -0.36
LRRC56-201ENST00000270115 MRPL23Q16540 153 aaKnown RBP12.8□□□□□ -0.36
LRRC56-201ENST00000270115 RNASE13Q5GAN3 156 aaKnown RBP12.79□□□□□ -0.36
LRRC56-201ENST00000270115 OOSP1A8MZH6 123 aa12.79□□□□□ -0.36
LRRC56-201ENST00000270115 I3L3M4 83 aa12.79□□□□□ -0.36
LRRC56-201ENST00000270115 TMEM101Q96IK0 257 aa12.79□□□□□ -0.36
LRRC56-201ENST00000270115 TIMM21Q9BVV7 248 aa12.79□□□□□ -0.36
LRRC56-201ENST00000270115 ITPR1Q14643 2758 aa12.79□□□□□ -0.36
LRRC56-201ENST00000270115 TRAV12-3A0A0B4J271 114 aa12.78□□□□□ -0.36
LRRC56-201ENST00000270115 NXPH4O95158 308 aa12.78□□□□□ -0.36
LRRC56-201ENST00000270115 GRNP28799 593 aaKnown RBP12.78□□□□□ -0.36
LRRC56-201ENST00000270115 TRBV7-7A0A0K0K1E9 115 aa12.78□□□□□ -0.36
LRRC56-201ENST00000270115 LOC107984640A0A0U1RRK4 108 aa12.78□□□□□ -0.36
LRRC56-201ENST00000270115 IGHV1-69P01742 117 aa12.78□□□□□ -0.36
LRRC56-201ENST00000270115 DAND5Q8N907 189 aa12.77□□□□□ -0.36
LRRC56-201ENST00000270115 DUX5Q96PT3 197 aa12.77□□□□□ -0.36
LRRC56-201ENST00000270115 IGLV4-3A0A075B6K6 122 aa12.77□□□□□ -0.37
LRRC56-201ENST00000270115 SOCS3O14543 225 aa12.77□□□□□ -0.37
LRRC56-201ENST00000270115 C9orf153Q5TBE3 101 aa12.77□□□□□ -0.37
LRRC56-201ENST00000270115 FAM19A4Q96LR4 140 aa12.77□□□□□ -0.37
LRRC56-201ENST00000270115 LST1O00453 97 aa12.76□□□□□ -0.37
LRRC56-201ENST00000270115 FAM240AA0A1B0GVK7 77 aa12.76□□□□□ -0.37
LRRC56-201ENST00000270115 ZFP36P26651 326 aaKnown RBP12.76□□□□□ -0.37
LRRC56-201ENST00000270115 MINOS1Q5TGZ0 78 aa12.76□□□□□ -0.37
LRRC56-201ENST00000270115 A0A0J9YX75 114 aa12.75□□□□□ -0.37
LRRC56-201ENST00000270115 C20orf203Q8NBC4 194 aa12.75□□□□□ -0.37
LRRC56-201ENST00000270115 NDUFA12Q9UI09 145 aa12.75□□□□□ -0.37
LRRC56-201ENST00000270115 KLK5Q9Y337 293 aaPredicted RBP12.75□□□□□ -0.37
LRRC56-201ENST00000270115 TMEM219Q86XT9 240 aa12.75□□□□□ -0.37
LRRC56-201ENST00000270115 SPTAN1Q13813 2472 aaKnown RBP12.75□□□□□ -0.37
LRRC56-201ENST00000270115 M0QY20 66 aa12.75□□□□□ -0.37
LRRC56-201ENST00000270115 CDSNQ15517 529 aa12.75□□□□□ -0.37
LRRC56-201ENST00000270115 MINOS1-NBL1R4GNA1 71 aa12.75□□□□□ -0.37
LRRC56-201ENST00000270115 NSUN5P1Q3KNT7 163 aa12.74□□□□□ -0.37
LRRC56-201ENST00000270115 TRBV6-5A0A0K0K1A5 114 aa12.74□□□□□ -0.37
LRRC56-201ENST00000270115 IGHV3-11P01762 117 aa12.74□□□□□ -0.37
LRRC56-201ENST00000270115 LY6DQ14210 128 aa12.74□□□□□ -0.37
LRRC56-201ENST00000270115 SMCR5Q8TEV8 140 aa12.74□□□□□ -0.37
LRRC56-201ENST00000270115 IGKV3-20P01619 116 aa12.73□□□□□ -0.37
LRRC56-201ENST00000270115 DEFB121Q5J5C9 76 aa12.73□□□□□ -0.37
LRRC56-201ENST00000270115 CD28P10747 220 aa12.72□□□□□ -0.37
LRRC56-201ENST00000270115 RHOHQ15669 191 aa12.72□□□□□ -0.37
LRRC56-201ENST00000270115 AKAP6Q13023 2319 aa12.72□□□□□ -0.37
LRRC56-201ENST00000270115 MIAQ16674 131 aa12.72□□□□□ -0.37
LRRC56-201ENST00000270115 APRG1Q8IVJ8 170 aa12.72□□□□□ -0.37
LRRC56-201ENST00000270115 TRAV12-2A0A075B6T6 113 aa12.71□□□□□ -0.37
LRRC56-201ENST00000270115 SAA4P35542 130 aa12.71□□□□□ -0.37
LRRC56-201ENST00000270115 TMEM61Q8N0U2 210 aa12.71□□□□□ -0.37
LRRC56-201ENST00000270115 CELSR1Q9NYQ6 3014 aa12.71□□□□□ -0.37
LRRC56-201ENST00000270115 NDUFA7O95182 113 aa12.71□□□□□ -0.38
LRRC56-201ENST00000270115 C3orf22Q8N5N4 141 aa12.71□□□□□ -0.38
LRRC56-201ENST00000270115 HERVK_113P63121 156 aa12.7□□□□□ -0.38
LRRC56-201ENST00000270115 SPANXDQ9BXN6 97 aa12.7□□□□□ -0.38
LRRC56-201ENST00000270115 SPANXCQ9NY87 97 aa12.7□□□□□ -0.38
LRRC56-201ENST00000270115 CSDC2Q9Y534 153 aaKnown RBP12.7□□□□□ -0.38
LRRC56-201ENST00000270115 TRAV41A0A0B4J266 112 aa12.69□□□□□ -0.38
LRRC56-201ENST00000270115 EDN2P20800 178 aa12.69□□□□□ -0.38
LRRC56-201ENST00000270115 NRGNQ92686 78 aa12.69□□□□□ -0.38
LRRC56-201ENST00000270115 HRNRQ86YZ3 2850 aaPredicted RBP12.69□□□□□ -0.38
LRRC56-201ENST00000270115 PKD1L2Q7Z442 2459 aa12.69□□□□□ -0.38
LRRC56-201ENST00000270115 IGHV1-58A0A0C4DH39 117 aa12.69□□□□□ -0.38
LRRC56-201ENST00000270115 KLLNB2CW77 178 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms