RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 LY6DQ14210 128 aa20.39■□□□□ 0.85
CBX4-201ENST00000269397 CLUHP3Q96NS8 147 aa20.39■□□□□ 0.85
CBX4-201ENST00000269397 GEMIN7Q9H840 131 aaKnown RBP20.39■□□□□ 0.85
CBX4-201ENST00000269397 A6NDX4 124 aa20.38■□□□□ 0.85
CBX4-201ENST00000269397 A0A0J9YXV3 536 aa20.37■□□□□ 0.85
CBX4-201ENST00000269397 H3BUA1 57 aa20.37■□□□□ 0.85
CBX4-201ENST00000269397 SPINK13Q1W4C9 94 aa20.37■□□□□ 0.85
CBX4-201ENST00000269397 C10orf99Q6UWK7 81 aa20.37■□□□□ 0.85
CBX4-201ENST00000269397 TRBV6-5A0A0K0K1A5 114 aa20.37■□□□□ 0.85
CBX4-201ENST00000269397 TMEM223A0PJW6 202 aa20.37■□□□□ 0.85
CBX4-201ENST00000269397 IGLV1-40P01703 118 aa20.37■□□□□ 0.85
CBX4-201ENST00000269397 C9orf85Q96MD7 179 aa20.37■□□□□ 0.85
CBX4-201ENST00000269397 ADARB2-AS1A8MUL3 147 aa20.36■□□□□ 0.85
CBX4-201ENST00000269397 MUSTN1Q8IVN3 82 aa20.36■□□□□ 0.85
CBX4-201ENST00000269397 TRAV26-1A0A087WT03 109 aa20.36■□□□□ 0.85
CBX4-201ENST00000269397 C9JAW5 83 aa20.36■□□□□ 0.85
CBX4-201ENST00000269397 ZNF22P17026 224 aaPredicted RBP20.34■□□□□ 0.85
CBX4-201ENST00000269397 SBSPONQ8IVN8 264 aa20.34■□□□□ 0.85
CBX4-201ENST00000269397 LEPROTO15243 131 aa20.34■□□□□ 0.85
CBX4-201ENST00000269397 ITPR1Q14643 2758 aa20.33■□□□□ 0.85
CBX4-201ENST00000269397 SLC25A20O43772 301 aa20.33■□□□□ 0.84
CBX4-201ENST00000269397 IGHV3-33P01772 117 aa20.33■□□□□ 0.84
CBX4-201ENST00000269397 ELANEP08246 267 aa20.33■□□□□ 0.84
CBX4-201ENST00000269397 IGHV3-73A0A0B4J1V6 119 aa20.32■□□□□ 0.84
CBX4-201ENST00000269397 RHODO00212 210 aa20.32■□□□□ 0.84
CBX4-201ENST00000269397 NSUN5P1Q3KNT7 163 aa20.32■□□□□ 0.84
CBX4-201ENST00000269397 HTN1P15515 57 aa20.32■□□□□ 0.84
CBX4-201ENST00000269397 C20orf203Q8NBC4 194 aa20.32■□□□□ 0.84
CBX4-201ENST00000269397 TMEM263Q8WUH6 116 aaKnown RBP20.32■□□□□ 0.84
CBX4-201ENST00000269397 BRI3O95415 125 aa20.31■□□□□ 0.84
CBX4-201ENST00000269397 UCNP55089 124 aa20.31■□□□□ 0.84
CBX4-201ENST00000269397 Q1RN00 199 aa20.31■□□□□ 0.84
CBX4-201ENST00000269397 BEX4Q9NWD9 120 aaPredicted RBP20.31■□□□□ 0.84
CBX4-201ENST00000269397 ERG28Q9UKR5 140 aa20.31■□□□□ 0.84
CBX4-201ENST00000269397 A0A0J9YX75 114 aa20.3■□□□□ 0.84
CBX4-201ENST00000269397 SPXQ9BT56 116 aa20.3■□□□□ 0.84
CBX4-201ENST00000269397 VCX2Q9H322 139 aa20.3■□□□□ 0.84
CBX4-201ENST00000269397 RNASE13Q5GAN3 156 aaKnown RBP20.3■□□□□ 0.84
CBX4-201ENST00000269397 CEMP1Q6PRD7 247 aaPredicted RBP20.3■□□□□ 0.84
CBX4-201ENST00000269397 IGLV4-3A0A075B6K6 122 aa20.29■□□□□ 0.84
CBX4-201ENST00000269397 IGHV1OR15-1A0A075B7D0 117 aa20.29■□□□□ 0.84
CBX4-201ENST00000269397 RHOHQ15669 191 aa20.29■□□□□ 0.84
CBX4-201ENST00000269397 CSMD2Q7Z408 3487 aa20.29■□□□□ 0.84
CBX4-201ENST00000269397 K7EMT4 169 aa20.28■□□□□ 0.84
CBX4-201ENST00000269397 PIMREGQ9BSJ6 248 aa20.28■□□□□ 0.84
CBX4-201ENST00000269397 DUX5Q96PT3 197 aa20.28■□□□□ 0.84
CBX4-201ENST00000269397 I3L3M4 83 aa20.27■□□□□ 0.84
CBX4-201ENST00000269397 CFHR3Q02985 330 aa20.27■□□□□ 0.84
CBX4-201ENST00000269397 AVPP01185 164 aa20.27■□□□□ 0.83
CBX4-201ENST00000269397 PROK1P58294 105 aa20.27■□□□□ 0.83
CBX4-201ENST00000269397 PRRC2AP48634 2157 aaKnown RBP20.26■□□□□ 0.83
CBX4-201ENST00000269397 TRAV8-3A0A0A6YYJ7 113 aa20.26■□□□□ 0.83
CBX4-201ENST00000269397 SNRPD3P62318 126 aaKnown RBP20.26■□□□□ 0.83
CBX4-201ENST00000269397 PRM2P04554 102 aa20.25■□□□□ 0.83
CBX4-201ENST00000269397 IGHV4-30-2A0A087WSY4 118 aa20.24■□□□□ 0.83
CBX4-201ENST00000269397 A0A0J9YXY3 114 aa20.24■□□□□ 0.83
CBX4-201ENST00000269397 PRSS2P07478 247 aa20.24■□□□□ 0.83
CBX4-201ENST00000269397 IGHV3-30-3P0DP02 117 aa20.23■□□□□ 0.83
CBX4-201ENST00000269397 Q9UF83 564 aa20.22■□□□□ 0.83
CBX4-201ENST00000269397 A0A0B4J2C4 111 aa20.22■□□□□ 0.83
CBX4-201ENST00000269397 CD28P10747 220 aa20.22■□□□□ 0.83
CBX4-201ENST00000269397 SYNJ2BPP57105 145 aa20.22■□□□□ 0.83
CBX4-201ENST00000269397 NPC2P61916 151 aa20.22■□□□□ 0.83
CBX4-201ENST00000269397 C10orf105Q8TEF2 133 aa20.22■□□□□ 0.83
CBX4-201ENST00000269397 M0R2P5 195 aa20.21■□□□□ 0.83
CBX4-201ENST00000269397 PSMB8P28062 276 aa20.21■□□□□ 0.83
CBX4-201ENST00000269397 NTN5Q8WTR8 489 aaPredicted RBP20.21■□□□□ 0.83
CBX4-201ENST00000269397 RNF183Q96D59 192 aa20.21■□□□□ 0.83
CBX4-201ENST00000269397 ZANQ9Y493 2812 aa20.21■□□□□ 0.83
CBX4-201ENST00000269397 A8MZ25 164 aa20.21■□□□□ 0.83
CBX4-201ENST00000269397 K7EQG2 157 aa20.2■□□□□ 0.82
CBX4-201ENST00000269397 GNLYP22749 145 aa20.2■□□□□ 0.82
CBX4-201ENST00000269397 KNCNA6PVL3 124 aa20.2■□□□□ 0.82
CBX4-201ENST00000269397 UTP20O75691 2785 aaKnown RBP20.2■□□□□ 0.82
CBX4-201ENST00000269397 FAM104AQ969W3 186 aa20.2■□□□□ 0.82
CBX4-201ENST00000269397 TIMM21Q9BVV7 248 aa20.2■□□□□ 0.82
CBX4-201ENST00000269397 CCL19Q99731 98 aa20.19■□□□□ 0.82
CBX4-201ENST00000269397 IGHV4-59P01825 116 aa20.19■□□□□ 0.82
CBX4-201ENST00000269397 RBMY1A1P0DJD3 496 aaKnown RBP20.19■□□□□ 0.82
CBX4-201ENST00000269397 RBMY1CP0DJD4 496 aa20.19■□□□□ 0.82
CBX4-201ENST00000269397 GATA3P23771 443 aa20.19■□□□□ 0.82
CBX4-201ENST00000269397 RBMY1FQ15415 496 aaKnown RBP20.19■□□□□ 0.82
CBX4-201ENST00000269397 Q6ZSV7 163 aa20.19■□□□□ 0.82
CBX4-201ENST00000269397 ODF3Q96PU9 254 aa20.19■□□□□ 0.82
CBX4-201ENST00000269397 MSMBP08118 114 aa20.18■□□□□ 0.82
CBX4-201ENST00000269397 ADAMTSL4-AS1Q5T5F5 129 aa20.18■□□□□ 0.82
CBX4-201ENST00000269397 TRIAP1O43715 76 aa20.17■□□□□ 0.82
CBX4-201ENST00000269397 ATP5J2P56134 94 aa20.17■□□□□ 0.82
CBX4-201ENST00000269397 LINC01620Q4KN68 170 aa20.17■□□□□ 0.82
CBX4-201ENST00000269397 CUBNO60494 3623 aa20.16■□□□□ 0.82
CBX4-201ENST00000269397 USP9YO00507 2555 aaPredicted RBP20.16■□□□□ 0.82
CBX4-201ENST00000269397 TRAV16A0A0A6YYK6 109 aaPredicted RBP20.16■□□□□ 0.82
CBX4-201ENST00000269397 TEX49A0A1B0GTD5 131 aa20.16■□□□□ 0.82
CBX4-201ENST00000269397 LITAFQ99732 161 aa20.16■□□□□ 0.82
CBX4-201ENST00000269397 TMEM262E9PQX1 116 aa20.15■□□□□ 0.82
CBX4-201ENST00000269397 FLNCQ14315 2725 aa20.15■□□□□ 0.82
CBX4-201ENST00000269397 ATXN8Q156A1 80 aa20.15■□□□□ 0.82
CBX4-201ENST00000269397 ZFAND6Q6FIF0 208 aa20.14■□□□□ 0.81
CBX4-201ENST00000269397 ANAPC13Q9BS18 74 aa20.13■□□□□ 0.81
CBX4-201ENST00000269397 TEX29Q8N6K0 151 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms