RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 DCANP1Q8TF63 244 aa12.48□□□□□ -0.41
SQLE-201ENST00000265896 TCL1BO95988 128 aa12.48□□□□□ -0.41
SQLE-201ENST00000265896 TAL2Q16559 108 aa12.48□□□□□ -0.41
SQLE-201ENST00000265896 ZNF876PQ49A33 203 aa12.48□□□□□ -0.41
SQLE-201ENST00000265896 ACANP16112 2415 aa12.48□□□□□ -0.41
SQLE-201ENST00000265896 CRIP2P52943 208 aaPredicted RBP12.48□□□□□ -0.41
SQLE-201ENST00000265896 TRPT1Q86TN4 253 aaKnown RBP12.48□□□□□ -0.41
SQLE-201ENST00000265896 SPXQ9BT56 116 aa12.48□□□□□ -0.41
SQLE-201ENST00000265896 LENEPQ9Y5L5 61 aa12.48□□□□□ -0.41
SQLE-201ENST00000265896 CFC1BP0CG36 223 aa12.47□□□□□ -0.41
SQLE-201ENST00000265896 CFC1P0CG37 223 aa12.47□□□□□ -0.41
SQLE-201ENST00000265896 POLR2KP53803 58 aaKnown RBP12.47□□□□□ -0.41
SQLE-201ENST00000265896 PIMREGQ9BSJ6 248 aa12.47□□□□□ -0.41
SQLE-201ENST00000265896 FAM19A4Q96LR4 140 aa12.47□□□□□ -0.41
SQLE-201ENST00000265896 C18orf65Q6ZTR6 163 aa12.46□□□□□ -0.41
SQLE-201ENST00000265896 NDUFA11Q86Y39 141 aa12.46□□□□□ -0.41
SQLE-201ENST00000265896 DLX4Q92988 240 aaPredicted RBP12.46□□□□□ -0.41
SQLE-201ENST00000265896 A6NDX4 124 aa12.46□□□□□ -0.42
SQLE-201ENST00000265896 VCYO14598 125 aa12.46□□□□□ -0.42
SQLE-201ENST00000265896 Q6ZSV7 163 aa12.46□□□□□ -0.42
SQLE-201ENST00000265896 TRAV8-3A0A0A6YYJ7 113 aa12.45□□□□□ -0.42
SQLE-201ENST00000265896 KLLNB2CW77 178 aa12.45□□□□□ -0.42
SQLE-201ENST00000265896 J3QQQ9 107 aa12.45□□□□□ -0.42
SQLE-201ENST00000265896 J3QR89 54 aa12.45□□□□□ -0.42
SQLE-201ENST00000265896 LGALS3P17931 250 aaKnown RBP12.45□□□□□ -0.42
SQLE-201ENST00000265896 IGHV3-38A0A0C4DH36 116 aa12.45□□□□□ -0.42
SQLE-201ENST00000265896 PRSS2P07478 247 aa12.45□□□□□ -0.42
SQLE-201ENST00000265896 DEFB112Q30KQ8 113 aa12.45□□□□□ -0.42
SQLE-201ENST00000265896 USMG5Q96IX5 58 aa12.45□□□□□ -0.42
SQLE-201ENST00000265896 FN1P02751 2386 aaKnown RBP12.45□□□□□ -0.42
SQLE-201ENST00000265896 A4D1N5 150 aa12.45□□□□□ -0.42
SQLE-201ENST00000265896 HERVK_113P61574 105 aa12.45□□□□□ -0.42
SQLE-201ENST00000265896 MT-ATP8P03928 68 aa12.44□□□□□ -0.42
SQLE-201ENST00000265896 UCNP55089 124 aa12.44□□□□□ -0.42
SQLE-201ENST00000265896 FOXI1Q12951 378 aa12.44□□□□□ -0.42
SQLE-201ENST00000265896 Q1RN00 199 aa12.44□□□□□ -0.42
SQLE-201ENST00000265896 CFAP126Q5VTH2 177 aa12.44□□□□□ -0.42
SQLE-201ENST00000265896 NBEAL2Q6ZNJ1 2754 aa12.44□□□□□ -0.42
SQLE-201ENST00000265896 ELANEP08246 267 aa12.44□□□□□ -0.42
SQLE-201ENST00000265896 IGHV3-16A0A0C4DH30 117 aa12.43□□□□□ -0.42
SQLE-201ENST00000265896 UBE2D1P51668 147 aa12.43□□□□□ -0.42
SQLE-201ENST00000265896 TMEM238LA0A1B0GVL6 79 aa12.43□□□□□ -0.42
SQLE-201ENST00000265896 A6NJY4 79 aa12.43□□□□□ -0.42
SQLE-201ENST00000265896 MSMBP08118 114 aa12.43□□□□□ -0.42
SQLE-201ENST00000265896 ID1P41134 155 aa12.43□□□□□ -0.42
SQLE-201ENST00000265896 KLK9Q2XQG4 91 aa12.43□□□□□ -0.42
SQLE-201ENST00000265896 C10orf105Q8TEF2 133 aa12.43□□□□□ -0.42
SQLE-201ENST00000265896 A0A0U1RRA0 63 aa12.42□□□□□ -0.42
SQLE-201ENST00000265896 M0QY20 66 aa12.42□□□□□ -0.42
SQLE-201ENST00000265896 EIF4EBP3O60516 100 aaPredicted RBP12.42□□□□□ -0.42
SQLE-201ENST00000265896 IGHV3-30P01768 117 aa12.42□□□□□ -0.42
SQLE-201ENST00000265896 IGHV3-30-5P0DP03 117 aa12.42□□□□□ -0.42
SQLE-201ENST00000265896 KHDC1LQ5JSQ8 128 aa12.42□□□□□ -0.42
SQLE-201ENST00000265896 RBMY1A1P0DJD3 496 aaKnown RBP12.42□□□□□ -0.42
SQLE-201ENST00000265896 RBMY1CP0DJD4 496 aa12.42□□□□□ -0.42
SQLE-201ENST00000265896 RBMY1FQ15415 496 aaKnown RBP12.42□□□□□ -0.42
SQLE-201ENST00000265896 DAND5Q8N907 189 aa12.42□□□□□ -0.42
SQLE-201ENST00000265896 IGLV1-40P01703 118 aa12.41□□□□□ -0.42
SQLE-201ENST00000265896 CARD19Q96LW7 228 aa12.41□□□□□ -0.42
SQLE-201ENST00000265896 NBPF19A0A087WUL8 3843 aa12.41□□□□□ -0.42
SQLE-201ENST00000265896 MUSTN1Q8IVN3 82 aa12.41□□□□□ -0.42
SQLE-201ENST00000265896 C11orf44Q8N8P7 122 aa12.4□□□□□ -0.42
SQLE-201ENST00000265896 IGHV4OR15-8A0A075B7B6 117 aa12.4□□□□□ -0.42
SQLE-201ENST00000265896 A0A087WW49 117 aa12.4□□□□□ -0.42
SQLE-201ENST00000265896 C9JAW5 83 aa12.4□□□□□ -0.42
SQLE-201ENST00000265896 C1QTNF4Q9BXJ3 329 aa12.4□□□□□ -0.42
SQLE-201ENST00000265896 A0A0J9YX75 114 aa12.39□□□□□ -0.43
SQLE-201ENST00000265896 AMELXQ99217 191 aa12.39□□□□□ -0.43
SQLE-201ENST00000265896 IGHV3OR16-12A0A075B7B8 117 aa12.39□□□□□ -0.43
SQLE-201ENST00000265896 IGHV1OR15-1A0A075B7D0 117 aa12.39□□□□□ -0.43
SQLE-201ENST00000265896 XGP55808 180 aa12.39□□□□□ -0.43
SQLE-201ENST00000265896 SNRPD3P62318 126 aaKnown RBP12.39□□□□□ -0.43
SQLE-201ENST00000265896 CDIP1Q9H305 208 aa12.39□□□□□ -0.43
SQLE-201ENST00000265896 VCX2Q9H322 139 aa12.39□□□□□ -0.43
SQLE-201ENST00000265896 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.38□□□□□ -0.43
SQLE-201ENST00000265896 IGKV2-29A2NJV5 120 aaPredicted RBP12.38□□□□□ -0.43
SQLE-201ENST00000265896 SPINK8P0C7L1 97 aa12.38□□□□□ -0.43
SQLE-201ENST00000265896 ANKRD29Q8N6D5 301 aa12.38□□□□□ -0.43
SQLE-201ENST00000265896 SLC25A29Q8N8R3 303 aa12.38□□□□□ -0.43
SQLE-201ENST00000265896 SETXQ7Z333 2677 aaKnown RBP12.38□□□□□ -0.43
SQLE-201ENST00000265896 SLURP1P55000 103 aa12.38□□□□□ -0.43
SQLE-201ENST00000265896 Q6ZSN1 163 aa12.38□□□□□ -0.43
SQLE-201ENST00000265896 TRBV27A0A0K0K1C4 114 aa12.37□□□□□ -0.43
SQLE-201ENST00000265896 C10orf126Q8N4M7 172 aa12.37□□□□□ -0.43
SQLE-201ENST00000265896 PRO1854Q9UHT4 67 aa12.37□□□□□ -0.43
SQLE-201ENST00000265896 PPP1R17O96001 155 aa12.37□□□□□ -0.43
SQLE-201ENST00000265896 CD28P10747 220 aa12.37□□□□□ -0.43
SQLE-201ENST00000265896 ZNF22P17026 224 aaPredicted RBP12.37□□□□□ -0.43
SQLE-201ENST00000265896 DEFB131AP59861 70 aa12.37□□□□□ -0.43
SQLE-201ENST00000265896 APRG1Q8IVJ8 170 aa12.37□□□□□ -0.43
SQLE-201ENST00000265896 SPATA25Q9BR10 227 aa12.37□□□□□ -0.43
SQLE-201ENST00000265896 PSMB8P28062 276 aa12.36□□□□□ -0.43
SQLE-201ENST00000265896 CKS1BP61024 79 aa12.36□□□□□ -0.43
SQLE-201ENST00000265896 ZNF625Q96I27 306 aaPredicted RBP12.36□□□□□ -0.43
SQLE-201ENST00000265896 NXPH4O95158 308 aa12.36□□□□□ -0.43
SQLE-201ENST00000265896 UBE2D3P61077 147 aa12.36□□□□□ -0.43
SQLE-201ENST00000265896 UBE2D2P62837 147 aa12.36□□□□□ -0.43
SQLE-201ENST00000265896 IGLV4-3A0A075B6K6 122 aa12.35□□□□□ -0.43
SQLE-201ENST00000265896 HOXD3P31249 432 aaPredicted RBP12.35□□□□□ -0.43
SQLE-201ENST00000265896 LGALS9O00182 355 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms