RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 URGCP-MRPS24S4R325 110 aa6.42□□□□□ -1.38
VPS41-201ENST00000265745 KANTRA0A1W2PQU2 76 aa6.41□□□□□ -1.38
VPS41-201ENST00000265745 CXCL1P09341 107 aa6.41□□□□□ -1.38
VPS41-201ENST00000265745 RAB4BP61018 213 aa6.41□□□□□ -1.38
VPS41-201ENST00000265745 PRR27Q6MZM9 219 aa6.41□□□□□ -1.38
VPS41-201ENST00000265745 OR10AG1Q8NH19 301 aa6.41□□□□□ -1.38
VPS41-201ENST00000265745 BAALCQ8WXS3 180 aa6.41□□□□□ -1.38
VPS41-201ENST00000265745 RMI2Q96E14 147 aa6.41□□□□□ -1.38
VPS41-201ENST00000265745 DNAJC30Q96LL9 226 aa6.41□□□□□ -1.38
VPS41-201ENST00000265745 CHCHD7Q9BUK0 85 aa6.41□□□□□ -1.38
VPS41-201ENST00000265745 KLK12Q9UKR0 248 aa6.41□□□□□ -1.38
VPS41-201ENST00000265745 HERC1Q15751 4861 aa6.41□□□□□ -1.38
VPS41-201ENST00000265745 A0A087WX48 190 aa6.4□□□□□ -1.38
VPS41-201ENST00000265745 SNAI2O43623 268 aa6.4□□□□□ -1.38
VPS41-201ENST00000265745 PFDN1O60925 122 aa6.4□□□□□ -1.38
VPS41-201ENST00000265745 OR5AL1P0C617 328 aa6.4□□□□□ -1.38
VPS41-201ENST00000265745 EIF5AP63241 154 aaKnown RBP6.4□□□□□ -1.38
VPS41-201ENST00000265745 CCL20P78556 96 aa6.4□□□□□ -1.38
VPS41-201ENST00000265745 Q6ZSA8 131 aa6.4□□□□□ -1.38
VPS41-201ENST00000265745 DMBT1Q9UGM3 2413 aaPredicted RBP6.4□□□□□ -1.39
VPS41-201ENST00000265745 FLG2Q5D862 2391 aaPredicted RBP6.39□□□□□ -1.39
VPS41-201ENST00000265745 SRRM2Q9UQ35 2752 aaKnown RBP6.39□□□□□ -1.39
VPS41-201ENST00000265745 IGKV2D-24A0A075B6R9 120 aa6.39□□□□□ -1.39
VPS41-201ENST00000265745 TRBV6-8A0A0A6YYG3 113 aa6.39□□□□□ -1.39
VPS41-201ENST00000265745 TRAV1-1A0A0B4J248 108 aa6.39□□□□□ -1.39
VPS41-201ENST00000265745 MUC21A0A0G2JKD1 596 aa6.39□□□□□ -1.39
VPS41-201ENST00000265745 MUC21A0A140T8X8 626 aa6.39□□□□□ -1.39
VPS41-201ENST00000265745 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
VPS41-201ENST00000265745 GAGE12HA6NDE8 117 aa6.39□□□□□ -1.39
VPS41-201ENST00000265745 RPL35P42766 123 aaKnown RBP6.39□□□□□ -1.39
VPS41-201ENST00000265745 ELOBQ15370 118 aa6.39□□□□□ -1.39
VPS41-201ENST00000265745 ATRAIDQ6UW56 229 aa6.39□□□□□ -1.39
VPS41-201ENST00000265745 Q8N976 141 aa6.39□□□□□ -1.39
VPS41-201ENST00000265745 NEXN-AS1Q8NBZ9 246 aa6.39□□□□□ -1.39
VPS41-201ENST00000265745 UBE2WQ96B02 151 aa6.39□□□□□ -1.39
VPS41-201ENST00000265745 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.38□□□□□ -1.39
VPS41-201ENST00000265745 TMEM262E9PQX1 116 aa6.38□□□□□ -1.39
VPS41-201ENST00000265745 Q0VG73 95 aa6.38□□□□□ -1.39
VPS41-201ENST00000265745 ZNF56Q15929 161 aa6.38□□□□□ -1.39
VPS41-201ENST00000265745 SPANXN1Q5VSR9 72 aa6.38□□□□□ -1.39
VPS41-201ENST00000265745 KCNIP4Q6PIL6 250 aa6.38□□□□□ -1.39
VPS41-201ENST00000265745 C11orf52Q96A22 123 aa6.38□□□□□ -1.39
VPS41-201ENST00000265745 DERL1Q9BUN8 251 aa6.38□□□□□ -1.39
VPS41-201ENST00000265745 GNG13Q9P2W3 67 aa6.38□□□□□ -1.39
VPS41-201ENST00000265745 KIF25-AS1Q9Y6Z4 181 aa6.38□□□□□ -1.39
VPS41-201ENST00000265745 DNAH8Q96JB1 4490 aa6.37□□□□□ -1.39
VPS41-201ENST00000265745 RBFOX3A6NFN3 312 aa6.37□□□□□ -1.39
VPS41-201ENST00000265745 IGLV2-8P01709 118 aa6.37□□□□□ -1.39
VPS41-201ENST00000265745 RAB5CP51148 216 aa6.37□□□□□ -1.39
VPS41-201ENST00000265745 SSTP61278 116 aa6.37□□□□□ -1.39
VPS41-201ENST00000265745 LINC01620Q4KN68 170 aa6.37□□□□□ -1.39
VPS41-201ENST00000265745 ENHOQ6UWT2 76 aa6.37□□□□□ -1.39
VPS41-201ENST00000265745 MANBALQ9NQG1 85 aa6.37□□□□□ -1.39
VPS41-201ENST00000265745 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
VPS41-201ENST00000265745 PCP4P48539 62 aa6.36□□□□□ -1.39
VPS41-201ENST00000265745 MPV17L2Q567V2 206 aa6.36□□□□□ -1.39
VPS41-201ENST00000265745 NTM-AS1Q6ZSK4 140 aa6.36□□□□□ -1.39
VPS41-201ENST00000265745 VAX2Q9UIW0 290 aa6.36□□□□□ -1.39
VPS41-201ENST00000265745 VPS13BQ7Z7G8 4022 aa6.35□□□□□ -1.39
VPS41-201ENST00000265745 RAB19A4D1S5 217 aa6.35□□□□□ -1.39
VPS41-201ENST00000265745 C19orf71A6NCJ1 209 aa6.35□□□□□ -1.39
VPS41-201ENST00000265745 IGLC6P0CF74 106 aa6.35□□□□□ -1.39
VPS41-201ENST00000265745 SMIM17P0DL12 118 aa6.35□□□□□ -1.39
VPS41-201ENST00000265745 GZMBP10144 247 aa6.35□□□□□ -1.39
VPS41-201ENST00000265745 CENPWQ5EE01 88 aa6.35□□□□□ -1.39
VPS41-201ENST00000265745 EIF5AL1Q6IS14 154 aaKnown RBP6.35□□□□□ -1.39
VPS41-201ENST00000265745 C15orf54Q8N8G6 183 aa6.35□□□□□ -1.39
VPS41-201ENST00000265745 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.35□□□□□ -1.39
VPS41-201ENST00000265745 AP1S3Q96PC3 154 aa6.35□□□□□ -1.39
VPS41-201ENST00000265745 CHCHD5Q9BSY4 110 aa6.35□□□□□ -1.39
VPS41-201ENST00000265745 TEX46H3BTG2 121 aa6.34□□□□□ -1.39
VPS41-201ENST00000265745 M0QY20 66 aa6.34□□□□□ -1.39
VPS41-201ENST00000265745 ANGP03950 147 aaKnown RBP6.34□□□□□ -1.39
VPS41-201ENST00000265745 GNG4P50150 75 aa6.34□□□□□ -1.39
VPS41-201ENST00000265745 SULT1A2P50226 295 aa6.34□□□□□ -1.39
VPS41-201ENST00000265745 RPS20P60866 119 aaKnown RBP6.34□□□□□ -1.39
VPS41-201ENST00000265745 PKIAP61925 76 aa6.34□□□□□ -1.39
VPS41-201ENST00000265745 MEF2BQ02080 365 aaPredicted RBP6.34□□□□□ -1.39
VPS41-201ENST00000265745 TMEM97Q5BJF2 176 aa6.34□□□□□ -1.39
VPS41-201ENST00000265745 SCXQ7RTU7 201 aa6.34□□□□□ -1.39
VPS41-201ENST00000265745 FER1L6-AS1Q8NA97 138 aa6.34□□□□□ -1.39
VPS41-201ENST00000265745 OR2D3Q8NGH3 330 aa6.34□□□□□ -1.39
VPS41-201ENST00000265745 DAZAP1Q96EP5 407 aaKnown RBP6.34□□□□□ -1.39
VPS41-201ENST00000265745 SMIM12Q96EX1 92 aa6.34□□□□□ -1.39
VPS41-201ENST00000265745 TPPP3Q9BW30 176 aa6.34□□□□□ -1.39
VPS41-201ENST00000265745 TRBV20OR9-2A0A075B6H5 130 aa6.33□□□□□ -1.4
VPS41-201ENST00000265745 F2Z2F3 143 aa6.33□□□□□ -1.4
VPS41-201ENST00000265745 PDE6DO43924 150 aa6.33□□□□□ -1.4
VPS41-201ENST00000265745 CRPP02741 224 aa6.33□□□□□ -1.4
VPS41-201ENST00000265745 SUMO2P61956 95 aaKnown RBP6.33□□□□□ -1.4
VPS41-201ENST00000265745 RBX1P62877 108 aa6.33□□□□□ -1.4
VPS41-201ENST00000265745 CACNG7P62955 275 aa6.33□□□□□ -1.4
VPS41-201ENST00000265745 MIAQ16674 131 aa6.33□□□□□ -1.4
VPS41-201ENST00000265745 C14orf177Q52M58 125 aa6.33□□□□□ -1.4
VPS41-201ENST00000265745 CHAC1Q9BUX1 264 aa6.33□□□□□ -1.4
VPS41-201ENST00000265745 PRR34Q9NV39 138 aa6.33□□□□□ -1.4
VPS41-201ENST00000265745 TRBV25-1A0A075B6N4 114 aa6.32□□□□□ -1.4
VPS41-201ENST00000265745 XKRY2A2RUG3 117 aa6.32□□□□□ -1.4
VPS41-201ENST00000265745 H7C1H1 209 aa6.32□□□□□ -1.4
VPS41-201ENST00000265745 SCGB1D1O95968 90 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms