RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ORMDL3Q8N138 153 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 SLC25A29Q8N8R3 303 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 NRACQ8N912 160 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 C11orf45Q8TAV5 145 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 C18orf15Q96N68 181 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 TMA7Q9Y2S6 64 aaKnown RBP6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 A0A0J9YY99 117 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 LOC389332A0A1B0GUA5 103 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 F5H768 121 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 RHODO00212 210 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 HIST1H2BKO60814 126 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 TNFRSF6BO95407 300 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 HIST1H2BJP06899 126 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 NHLRC4P0CG21 123 aaPredicted RBP6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 HIST1H2BOP23527 126 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 HIST1H2BBP33778 126 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 HIST1H2BDP58876 126 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 HIST1H2BCP62807 126 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 HIST2H2BEQ16778 126 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 HIST1H2BHQ93079 126 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 MRAP2Q96G30 205 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 HIST1H2BNQ99877 126 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 HIST1H2BMQ99879 126 aa6.85□□□□□ -1.31
SNRNP40-201ENST00000263694 ATP5G1P05496 136 aa6.84□□□□□ -1.31
SNRNP40-201ENST00000263694 OR10J3Q5JRS4 329 aa6.84□□□□□ -1.31
SNRNP40-201ENST00000263694 NEGR1Q7Z3B1 354 aa6.84□□□□□ -1.31
SNRNP40-201ENST00000263694 HHLA3Q9XRX5 114 aa6.84□□□□□ -1.31
SNRNP40-201ENST00000263694 TGP01266 2768 aa6.84□□□□□ -1.31
SNRNP40-201ENST00000263694 TEX48A0A1B0GUV7 120 aa6.83□□□□□ -1.32
SNRNP40-201ENST00000263694 K7EQD1 137 aa6.83□□□□□ -1.32
SNRNP40-201ENST00000263694 NEXN-AS1Q8NBZ9 246 aa6.83□□□□□ -1.32
SNRNP40-201ENST00000263694 C18orf32Q8TCD1 76 aa6.83□□□□□ -1.32
SNRNP40-201ENST00000263694 GAGE12JA6NER3 117 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 PPBPP02775 128 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 CRYBA4P53673 196 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 GAGE1Q13065 139 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 GAGE4Q13068 117 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 GAGE5Q13069 117 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 GAGE13Q4V321 117 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 VSIG2Q96IQ7 327 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 EDA2RQ9HAV5 297 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 NIT2Q9NQR4 276 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 TRAV26-1A0A087WT03 109 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 PAX4O43316 350 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 IFI27P40305 119 aaPredicted RBP6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 NDUFA6P56556 154 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 RAB5BP61020 215 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 ZNRF2Q8NHG8 242 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 PHLDA1Q8WV24 401 aaPredicted RBP6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 URB1-AS1Q96HZ7 61 aa6.82□□□□□ -1.32
SNRNP40-201ENST00000263694 DEFB131BA0A096LNP1 70 aa6.81□□□□□ -1.32
SNRNP40-201ENST00000263694 A0A096LPF7 62 aa6.81□□□□□ -1.32
SNRNP40-201ENST00000263694 IGHV3-38A0A0C4DH36 116 aa6.81□□□□□ -1.32
SNRNP40-201ENST00000263694 TRBV6-4A0A1B0GX49 114 aa6.81□□□□□ -1.32
SNRNP40-201ENST00000263694 SDHAF1A6NFY7 115 aa6.81□□□□□ -1.32
SNRNP40-201ENST00000263694 H7C1H1 209 aa6.81□□□□□ -1.32
SNRNP40-201ENST00000263694 NUPR1O60356 82 aa6.81□□□□□ -1.32
SNRNP40-201ENST00000263694 CIDEAO60543 219 aa6.81□□□□□ -1.32
SNRNP40-201ENST00000263694 GYPEP15421 78 aa6.81□□□□□ -1.32
SNRNP40-201ENST00000263694 ST20Q9HBF5 79 aa6.81□□□□□ -1.32
SNRNP40-201ENST00000263694 PRO0255Q9UI72 69 aa6.81□□□□□ -1.32
SNRNP40-201ENST00000263694 TNFRSF18Q9Y5U5 241 aa6.81□□□□□ -1.32
SNRNP40-201ENST00000263694 POLR2KP53803 58 aaKnown RBP6.8□□□□□ -1.32
SNRNP40-201ENST00000263694 LINC00310P59036 64 aa6.8□□□□□ -1.32
SNRNP40-201ENST00000263694 SUMO2P61956 95 aaKnown RBP6.8□□□□□ -1.32
SNRNP40-201ENST00000263694 NIT1Q86X76 327 aa6.8□□□□□ -1.32
SNRNP40-201ENST00000263694 BAGE3Q86Y29 109 aa6.8□□□□□ -1.32
SNRNP40-201ENST00000263694 PRADC1Q9BSG0 188 aa6.8□□□□□ -1.32
SNRNP40-201ENST00000263694 TMEM70Q9BUB7 260 aa6.8□□□□□ -1.32
SNRNP40-201ENST00000263694 MAP1LC3AQ9H492 121 aa6.8□□□□□ -1.32
SNRNP40-201ENST00000263694 IGLV2-18A0A075B6J9 118 aa6.79□□□□□ -1.32
SNRNP40-201ENST00000263694 TRBV7-3A0A075B6L6 115 aa6.79□□□□□ -1.32
SNRNP40-201ENST00000263694 TRBV6-5A0A0K0K1A5 114 aa6.79□□□□□ -1.32
SNRNP40-201ENST00000263694 TCAPO15273 167 aa6.79□□□□□ -1.32
SNRNP40-201ENST00000263694 Q0VG73 95 aa6.79□□□□□ -1.32
SNRNP40-201ENST00000263694 RHOHQ15669 191 aa6.79□□□□□ -1.32
SNRNP40-201ENST00000263694 RNASEKQ6P5S7 137 aaKnown RBP6.79□□□□□ -1.32
SNRNP40-201ENST00000263694 PRSS3P2Q8NHM4 247 aa6.79□□□□□ -1.32
SNRNP40-201ENST00000263694 C20orf78Q9BR46 151 aa6.79□□□□□ -1.32
SNRNP40-201ENST00000263694 SMIM2Q9BVW6 85 aa6.79□□□□□ -1.32
SNRNP40-201ENST00000263694 LAMTOR2Q9Y2Q5 125 aa6.79□□□□□ -1.32
SNRNP40-201ENST00000263694 TRBV10-1A0A0K0K1A3 114 aa6.78□□□□□ -1.32
SNRNP40-201ENST00000263694 SERF1AO75920 110 aa6.78□□□□□ -1.32
SNRNP40-201ENST00000263694 RPL36AP83881 106 aaKnown RBP6.78□□□□□ -1.32
SNRNP40-201ENST00000263694 PMCHL1Q16048 86 aa6.78□□□□□ -1.32
SNRNP40-201ENST00000263694 RPL36ALQ969Q0 106 aaKnown RBP6.78□□□□□ -1.32
SNRNP40-201ENST00000263694 DNAJC30Q96LL9 226 aa6.78□□□□□ -1.32
SNRNP40-201ENST00000263694 TRAV10A0A0B4J240 114 aa6.78□□□□□ -1.32
SNRNP40-201ENST00000263694 PRSS47A8MTI9 375 aa6.78□□□□□ -1.32
SNRNP40-201ENST00000263694 PPP1R17O96001 155 aa6.78□□□□□ -1.32
SNRNP40-201ENST00000263694 PMCHP20382 165 aa6.78□□□□□ -1.32
SNRNP40-201ENST00000263694 UBE2D3P61077 147 aa6.78□□□□□ -1.32
SNRNP40-201ENST00000263694 UBE2D2P62837 147 aa6.78□□□□□ -1.32
SNRNP40-201ENST00000263694 PDZD11Q5EBL8 140 aa6.78□□□□□ -1.32
SNRNP40-201ENST00000263694 Q8N8P6 123 aa6.78□□□□□ -1.32
SNRNP40-201ENST00000263694 VCYO14598 125 aa6.77□□□□□ -1.33
SNRNP40-201ENST00000263694 NUDT3O95989 172 aa6.77□□□□□ -1.33
SNRNP40-201ENST00000263694 LINC00614P0C842 121 aa6.77□□□□□ -1.33
SNRNP40-201ENST00000263694 LINC00694P0DN24 101 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms