RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 PTPRBP23467 1997 aa6.48□□□□□ -1.37
LDB3-201ENST00000263066 NDUFC2O95298 119 aa6.48□□□□□ -1.37
LDB3-201ENST00000263066 RNASE1P07998 156 aaKnown RBP6.48□□□□□ -1.37
LDB3-201ENST00000263066 WDR86Q86TI4 376 aa6.48□□□□□ -1.37
LDB3-201ENST00000263066 MUSTN1Q8IVN3 82 aa6.48□□□□□ -1.37
LDB3-201ENST00000263066 CD177Q8N6Q3 437 aa6.48□□□□□ -1.37
LDB3-201ENST00000263066 METTL26Q96S19 204 aa6.48□□□□□ -1.37
LDB3-201ENST00000263066 UTF1Q5T230 341 aa6.48□□□□□ -1.37
LDB3-201ENST00000263066 DPH3Q96FX2 82 aa6.48□□□□□ -1.37
LDB3-201ENST00000263066 C17orf77Q96MU5 243 aa6.48□□□□□ -1.37
LDB3-201ENST00000263066 PYGO1Q9Y3Y4 419 aa6.48□□□□□ -1.37
LDB3-201ENST00000263066 OVOL1O14753 267 aa6.47□□□□□ -1.37
LDB3-201ENST00000263066 ATP5G1P05496 136 aa6.47□□□□□ -1.37
LDB3-201ENST00000263066 IGHV4-30-2A0A087WSY4 118 aa6.47□□□□□ -1.37
LDB3-201ENST00000263066 J3QQQ9 107 aa6.47□□□□□ -1.37
LDB3-201ENST00000263066 IGHV3-23P01764 117 aa6.47□□□□□ -1.37
LDB3-201ENST00000263066 ACYP1P07311 99 aa6.47□□□□□ -1.37
LDB3-201ENST00000263066 RPL27AP46776 148 aaKnown RBP6.47□□□□□ -1.37
LDB3-201ENST00000263066 C20orf197Q8N268 126 aa6.47□□□□□ -1.37
LDB3-201ENST00000263066 RNF138Q8WVD3 245 aa6.47□□□□□ -1.37
LDB3-201ENST00000263066 STAB1Q9NY15 2570 aa6.47□□□□□ -1.37
LDB3-201ENST00000263066 TMEM178BH3BS89 294 aa6.47□□□□□ -1.37
LDB3-201ENST00000263066 GAS8-AS1O95177 125 aa6.47□□□□□ -1.37
LDB3-201ENST00000263066 C16orf92Q96LL3 132 aa6.47□□□□□ -1.37
LDB3-201ENST00000263066 HRNRQ86YZ3 2850 aaPredicted RBP6.46□□□□□ -1.37
LDB3-201ENST00000263066 IGHV3-49A0A0A0MS15 119 aa6.46□□□□□ -1.37
LDB3-201ENST00000263066 HIST2H2BDQ6DRA6 164 aa6.46□□□□□ -1.37
LDB3-201ENST00000263066 PHLDA3Q9Y5J5 127 aa6.46□□□□□ -1.37
LDB3-201ENST00000263066 A0A0B4J2C4 111 aa6.46□□□□□ -1.38
LDB3-201ENST00000263066 RBMY1BA6NDE4 496 aaKnown RBP6.46□□□□□ -1.38
LDB3-201ENST00000263066 RBMY1EA6NEQ0 496 aaKnown RBP6.46□□□□□ -1.38
LDB3-201ENST00000263066 RBMY1DP0C7P1 496 aaKnown RBP6.46□□□□□ -1.38
LDB3-201ENST00000263066 RBMY1A1P0DJD3 496 aaKnown RBP6.46□□□□□ -1.38
LDB3-201ENST00000263066 RBMY1CP0DJD4 496 aa6.46□□□□□ -1.38
LDB3-201ENST00000263066 UBE2D1P51668 147 aa6.46□□□□□ -1.38
LDB3-201ENST00000263066 RBMY1FQ15415 496 aaKnown RBP6.46□□□□□ -1.38
LDB3-201ENST00000263066 PRR25Q96S07 402 aa6.46□□□□□ -1.38
LDB3-201ENST00000263066 IGKV1D-17A0A075B6S4 117 aa6.46□□□□□ -1.38
LDB3-201ENST00000263066 RPS28P62857 69 aaKnown RBP6.46□□□□□ -1.38
LDB3-201ENST00000263066 DAZAP2Q15038 168 aaPredicted RBP6.46□□□□□ -1.38
LDB3-201ENST00000263066 MPLKIPQ8TAP9 179 aa6.46□□□□□ -1.38
LDB3-201ENST00000263066 SRRM4A7MD48 611 aaKnown RBP6.45□□□□□ -1.38
LDB3-201ENST00000263066 H3BT86 120 aa6.45□□□□□ -1.38
LDB3-201ENST00000263066 EGR2P11161 476 aaPredicted RBP6.45□□□□□ -1.38
LDB3-201ENST00000263066 SIRPDQ9H106 197 aa6.45□□□□□ -1.38
LDB3-201ENST00000263066 TEX15Q9BXT5 2789 aa6.45□□□□□ -1.38
LDB3-201ENST00000263066 IGHV4-61A0A0C4DH41 118 aa6.45□□□□□ -1.38
LDB3-201ENST00000263066 KNCNA6PVL3 124 aa6.45□□□□□ -1.38
LDB3-201ENST00000263066 IGHV3-11P01762 117 aa6.45□□□□□ -1.38
LDB3-201ENST00000263066 IGHV3-33P01772 117 aa6.45□□□□□ -1.38
LDB3-201ENST00000263066 PIFOQ8TCI5 191 aa6.45□□□□□ -1.38
LDB3-201ENST00000263066 SRRM5B3KS81 715 aa6.45□□□□□ -1.38
LDB3-201ENST00000263066 LINC00336Q6ZUF6 198 aa6.45□□□□□ -1.38
LDB3-201ENST00000263066 IMUPQ9GZP8 106 aa6.45□□□□□ -1.38
LDB3-201ENST00000263066 ICOSQ9Y6W8 199 aa6.45□□□□□ -1.38
LDB3-201ENST00000263066 U3KQE9 123 aa6.45□□□□□ -1.38
LDB3-201ENST00000263066 M0R1W7 72 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 ZNF134P52741 427 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 Q6ZS46 218 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 ZNRF2Q8NHG8 242 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 SMR3AQ99954 134 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 UNC79Q9P2D8 2635 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 IGKV3D-20A0A0C4DH25 116 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 A0A0J9YY99 117 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 A0A1W2PPR1 153 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 TRIAP1O43715 76 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 PLA2G2AP14555 144 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 FAM74A4Q5TZK3 123 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 UBR5O95071 2799 aaPredicted RBP6.44□□□□□ -1.38
LDB3-201ENST00000263066 TRAV21A0A0B4J279 112 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 UBE2E1P51965 193 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 Q6ZSR3 168 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 COPS9Q8WXC6 57 aa6.44□□□□□ -1.38
LDB3-201ENST00000263066 TRBV19A0A075B6N1 114 aa6.43□□□□□ -1.38
LDB3-201ENST00000263066 TMEM200BQ69YZ2 307 aa6.43□□□□□ -1.38
LDB3-201ENST00000263066 C14orf178Q8N769 122 aaPredicted RBP6.43□□□□□ -1.38
LDB3-201ENST00000263066 SMIM2Q9BVW6 85 aa6.43□□□□□ -1.38
LDB3-201ENST00000263066 INAFM2P0DMQ5 153 aa6.43□□□□□ -1.38
LDB3-201ENST00000263066 TP53TG1Q9Y2A0 90 aa6.43□□□□□ -1.38
LDB3-201ENST00000263066 C11orf86A6NJI1 115 aa6.43□□□□□ -1.38
LDB3-201ENST00000263066 LOXP28300 417 aaPredicted RBP6.43□□□□□ -1.38
LDB3-201ENST00000263066 GATA4P43694 442 aa6.43□□□□□ -1.38
LDB3-201ENST00000263066 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.43□□□□□ -1.38
LDB3-201ENST00000263066 SERP2Q8N6R1 65 aa6.43□□□□□ -1.38
LDB3-201ENST00000263066 NBEAL1Q6ZS30 2694 aa6.43□□□□□ -1.38
LDB3-201ENST00000263066 IGLV1-44P01699 117 aa6.42□□□□□ -1.38
LDB3-201ENST00000263066 BAALC-AS2P0C853 105 aa6.42□□□□□ -1.38
LDB3-201ENST00000263066 SUMO2P61956 95 aaKnown RBP6.42□□□□□ -1.38
LDB3-201ENST00000263066 IL17DQ8TAD2 202 aa6.42□□□□□ -1.38
LDB3-201ENST00000263066 MRPL36Q9P0J6 103 aaKnown RBP6.42□□□□□ -1.38
LDB3-201ENST00000263066 H7C423 109 aa6.42□□□□□ -1.38
LDB3-201ENST00000263066 WT1-ASQ06250 92 aa6.42□□□□□ -1.38
LDB3-201ENST00000263066 COL6A5A8TX70 2615 aa6.42□□□□□ -1.38
LDB3-201ENST00000263066 IGHV3-66A0A0C4DH42 116 aa6.42□□□□□ -1.38
LDB3-201ENST00000263066 H3BUX3 64 aa6.42□□□□□ -1.38
LDB3-201ENST00000263066 PROP1O75360 226 aa6.42□□□□□ -1.38
LDB3-201ENST00000263066 TRGV3P03979 118 aa6.42□□□□□ -1.38
LDB3-201ENST00000263066 VMO1Q7Z5L0 202 aa6.42□□□□□ -1.38
LDB3-201ENST00000263066 FAM19A4Q96LR4 140 aa6.42□□□□□ -1.38
LDB3-201ENST00000263066 A0A087WVE0 104 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms