RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 TRAV8-3A0A0A6YYJ7 113 aa9.48□□□□□ -0.89
FOXN3-201ENST00000261302 F8W735 103 aaPredicted RBP9.48□□□□□ -0.89
FOXN3-201ENST00000261302 MALP21145 153 aa9.48□□□□□ -0.89
FOXN3-201ENST00000261302 CCL8P80075 99 aa9.48□□□□□ -0.89
FOXN3-201ENST00000261302 RPL18AQ02543 176 aaKnown RBP9.48□□□□□ -0.89
FOXN3-201ENST00000261302 PRO0628Q9UI54 55 aa9.48□□□□□ -0.89
FOXN3-201ENST00000261302 MYO18BQ8IUG5 2567 aa9.48□□□□□ -0.89
FOXN3-201ENST00000261302 SERP2Q8N6R1 65 aa9.48□□□□□ -0.89
FOXN3-201ENST00000261302 C9orf106Q8NAJ2 232 aa9.48□□□□□ -0.89
FOXN3-201ENST00000261302 RHOHQ15669 191 aa9.47□□□□□ -0.89
FOXN3-201ENST00000261302 DAND5Q8N907 189 aa9.47□□□□□ -0.89
FOXN3-201ENST00000261302 S4R3C0 116 aa9.47□□□□□ -0.89
FOXN3-201ENST00000261302 TRAV13-1A0A0B4J241 112 aa9.47□□□□□ -0.89
FOXN3-201ENST00000261302 CDSNQ15517 529 aa9.47□□□□□ -0.89
FOXN3-201ENST00000261302 ZFAND3Q9H8U3 227 aa9.47□□□□□ -0.89
FOXN3-201ENST00000261302 SLC25A15Q9Y619 301 aa9.47□□□□□ -0.89
FOXN3-201ENST00000261302 RPL39P62891 51 aaKnown RBP9.46□□□□□ -0.89
FOXN3-201ENST00000261302 DYNLRB1Q9NP97 96 aa9.46□□□□□ -0.89
FOXN3-201ENST00000261302 HIVEP3Q5T1R4 2406 aa9.46□□□□□ -0.89
FOXN3-201ENST00000261302 NBASA2RRP1 2371 aa9.46□□□□□ -0.89
FOXN3-201ENST00000261302 IGHV1-3A0A0C4DH29 117 aa9.46□□□□□ -0.9
FOXN3-201ENST00000261302 RNF182Q8N6D2 247 aa9.46□□□□□ -0.9
FOXN3-201ENST00000261302 FLNCQ14315 2725 aa9.45□□□□□ -0.9
FOXN3-201ENST00000261302 IGHV4OR15-8A0A075B7B6 117 aa9.45□□□□□ -0.9
FOXN3-201ENST00000261302 A0A087WW49 117 aa9.45□□□□□ -0.9
FOXN3-201ENST00000261302 J3QLI3 93 aa9.45□□□□□ -0.9
FOXN3-201ENST00000261302 MGPP08493 103 aa9.45□□□□□ -0.9
FOXN3-201ENST00000261302 IGHV1-8P0DP01 117 aa9.45□□□□□ -0.9
FOXN3-201ENST00000261302 POLR2KP53803 58 aaKnown RBP9.45□□□□□ -0.9
FOXN3-201ENST00000261302 RNF5Q99942 180 aa9.45□□□□□ -0.9
FOXN3-201ENST00000261302 FASNP49327 2511 aaKnown RBP9.45□□□□□ -0.9
FOXN3-201ENST00000261302 MALRD1Q5VYJ5 2156 aa9.45□□□□□ -0.9
FOXN3-201ENST00000261302 IGLV11-55A0A075B6I3 123 aa9.45□□□□□ -0.9
FOXN3-201ENST00000261302 IGHV1-69P01742 117 aa9.45□□□□□ -0.9
FOXN3-201ENST00000261302 TMEM61Q8N0U2 210 aa9.45□□□□□ -0.9
FOXN3-201ENST00000261302 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.44□□□□□ -0.9
FOXN3-201ENST00000261302 C9orf47Q6ZRZ4 202 aa9.44□□□□□ -0.9
FOXN3-201ENST00000261302 FANCD2OSQ96PS1 177 aa9.44□□□□□ -0.9
FOXN3-201ENST00000261302 RNF152Q8N8N0 203 aa9.44□□□□□ -0.9
FOXN3-201ENST00000261302 MRPL53Q96EL3 112 aaKnown RBP9.44□□□□□ -0.9
FOXN3-201ENST00000261302 LINC00477Q96M19 166 aa9.44□□□□□ -0.9
FOXN3-201ENST00000261302 PRSS2P07478 247 aa9.43□□□□□ -0.9
FOXN3-201ENST00000261302 MIAQ16674 131 aa9.43□□□□□ -0.9
FOXN3-201ENST00000261302 FBXL19-AS1Q494R0 122 aa9.43□□□□□ -0.9
FOXN3-201ENST00000261302 Q6ZSV7 163 aa9.43□□□□□ -0.9
FOXN3-201ENST00000261302 VCYO14598 125 aa9.43□□□□□ -0.9
FOXN3-201ENST00000261302 MED14OSP0DP75 135 aa9.43□□□□□ -0.9
FOXN3-201ENST00000261302 IGHV3-64A0A075B6Q5 118 aa9.42□□□□□ -0.9
FOXN3-201ENST00000261302 NDUFB3O43676 98 aa9.42□□□□□ -0.9
FOXN3-201ENST00000261302 IGLV1-47P01700 117 aa9.42□□□□□ -0.9
FOXN3-201ENST00000261302 GRNP28799 593 aaKnown RBP9.42□□□□□ -0.9
FOXN3-201ENST00000261302 ADAMTSL4-AS1Q5T5F5 129 aa9.42□□□□□ -0.9
FOXN3-201ENST00000261302 USP9XQ93008 2570 aaPredicted RBP9.42□□□□□ -0.9
FOXN3-201ENST00000261302 M0R1B8 84 aa9.42□□□□□ -0.9
FOXN3-201ENST00000261302 LOXP28300 417 aaPredicted RBP9.42□□□□□ -0.9
FOXN3-201ENST00000261302 DAZ2Q13117 558 aaKnown RBP9.42□□□□□ -0.9
FOXN3-201ENST00000261302 DAZ4Q86SG3 579 aaKnown RBP9.42□□□□□ -0.9
FOXN3-201ENST00000261302 DAZ1Q9NQZ3 744 aaKnown RBP9.42□□□□□ -0.9
FOXN3-201ENST00000261302 DAZ3Q9NR90 486 aaKnown RBP9.42□□□□□ -0.9
FOXN3-201ENST00000261302 PHLDA3Q9Y5J5 127 aa9.42□□□□□ -0.9
FOXN3-201ENST00000261302 BAHCC1Q9P281 2608 aa9.41□□□□□ -0.9
FOXN3-201ENST00000261302 C19orf84I3L1E1 186 aa9.41□□□□□ -0.9
FOXN3-201ENST00000261302 CTSGP08311 255 aa9.41□□□□□ -0.9
FOXN3-201ENST00000261302 NDUFC2-KCTD14E9PQ53 114 aa9.41□□□□□ -0.9
FOXN3-201ENST00000261302 LY6LH3BQJ8 138 aa9.41□□□□□ -0.9
FOXN3-201ENST00000261302 IGHV3-30-3P0DP02 117 aa9.41□□□□□ -0.9
FOXN3-201ENST00000261302 TIRAPP58753 221 aa9.41□□□□□ -0.9
FOXN3-201ENST00000261302 PRR9Q5T870 116 aa9.41□□□□□ -0.9
FOXN3-201ENST00000261302 DOPEY1Q5JWR5 2465 aa9.41□□□□□ -0.9
FOXN3-201ENST00000261302 TINCRA0A1B0GVN0 87 aa9.4□□□□□ -0.9
FOXN3-201ENST00000261302 BUB1B-PAK6H3BSN5 160 aa9.4□□□□□ -0.9
FOXN3-201ENST00000261302 BUB3O43684 328 aa9.4□□□□□ -0.9
FOXN3-201ENST00000261302 INAFM2P0DMQ5 153 aa9.4□□□□□ -0.9
FOXN3-201ENST00000261302 PFN2P35080 140 aa9.4□□□□□ -0.9
FOXN3-201ENST00000261302 LINC00315P59091 139 aa9.4□□□□□ -0.9
FOXN3-201ENST00000261302 NSUN5P1Q3KNT7 163 aa9.4□□□□□ -0.9
FOXN3-201ENST00000261302 RNASE6Q93091 150 aaKnown RBP9.4□□□□□ -0.9
FOXN3-201ENST00000261302 ZNF580Q9UK33 172 aa9.4□□□□□ -0.9
FOXN3-201ENST00000261302 LENEPQ9Y5L5 61 aa9.4□□□□□ -0.9
FOXN3-201ENST00000261302 KIF25-AS1Q9Y6Z4 181 aa9.4□□□□□ -0.9
FOXN3-201ENST00000261302 CADP27708 2225 aa9.4□□□□□ -0.9
FOXN3-201ENST00000261302 IGHV3OR16-10A0A075B7F0 116 aa9.4□□□□□ -0.91
FOXN3-201ENST00000261302 COX7A2LO14548 114 aa9.4□□□□□ -0.91
FOXN3-201ENST00000261302 FAM222AQ5U5X8 452 aa9.4□□□□□ -0.91
FOXN3-201ENST00000261302 PIMREGQ9BSJ6 248 aa9.4□□□□□ -0.91
FOXN3-201ENST00000261302 TRBV27A0A0K0K1C4 114 aa9.39□□□□□ -0.91
FOXN3-201ENST00000261302 S100A4P26447 101 aaKnown RBP9.39□□□□□ -0.91
FOXN3-201ENST00000261302 RP1L1Q8IWN7 2480 aaPredicted RBP9.39□□□□□ -0.91
FOXN3-201ENST00000261302 EPM2AB3EWF7 344 aa9.39□□□□□ -0.91
FOXN3-201ENST00000261302 BEAN1Q3B7T3 259 aa9.39□□□□□ -0.91
FOXN3-201ENST00000261302 LYPD2Q6UXB3 125 aa9.39□□□□□ -0.91
FOXN3-201ENST00000261302 LINC00336Q6ZUF6 198 aa9.39□□□□□ -0.91
FOXN3-201ENST00000261302 C22orf24Q9Y442 160 aa9.39□□□□□ -0.91
FOXN3-201ENST00000261302 NXPH4O95158 308 aa9.38□□□□□ -0.91
FOXN3-201ENST00000261302 ADARB2-AS1A8MUL3 147 aa9.38□□□□□ -0.91
FOXN3-201ENST00000261302 C10orf105Q8TEF2 133 aa9.38□□□□□ -0.91
FOXN3-201ENST00000261302 PRRC2AP48634 2157 aaKnown RBP9.37□□□□□ -0.91
FOXN3-201ENST00000261302 A0A0J9YXV3 536 aa9.37□□□□□ -0.91
FOXN3-201ENST00000261302 SYNJ2BPP57105 145 aa9.37□□□□□ -0.91
FOXN3-201ENST00000261302 HIST2H2BCQ6DN03 193 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms