RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 HSPB8Q9UJY1 196 aa16.19■□□□□ 0.18
SIX3-201ENST00000260653 C20orf78Q9BR46 151 aa16.18■□□□□ 0.18
SIX3-201ENST00000260653 C1QTNF4Q9BXJ3 329 aa16.18■□□□□ 0.18
SIX3-201ENST00000260653 MRPL16Q9NX20 251 aaKnown RBP16.18■□□□□ 0.18
SIX3-201ENST00000260653 CRYBA4P53673 196 aa16.17■□□□□ 0.18
SIX3-201ENST00000260653 BATFQ16520 125 aa16.17■□□□□ 0.18
SIX3-201ENST00000260653 C3orf56Q8N813 242 aa16.17■□□□□ 0.18
SIX3-201ENST00000260653 COL6A5A8TX70 2615 aa16.17■□□□□ 0.18
SIX3-201ENST00000260653 TEX43Q6ZNM6 134 aa16.16■□□□□ 0.18
SIX3-201ENST00000260653 IGHV3-73A0A0B4J1V6 119 aa16.16■□□□□ 0.18
SIX3-201ENST00000260653 SYS1-DBNDD2H3BUS1 97 aa16.16■□□□□ 0.18
SIX3-201ENST00000260653 PPP1R17O96001 155 aa16.16■□□□□ 0.18
SIX3-201ENST00000260653 IL17DQ8TAD2 202 aa16.16■□□□□ 0.18
SIX3-201ENST00000260653 PGPEP1Q9NXJ5 209 aa16.16■□□□□ 0.18
SIX3-201ENST00000260653 OR4C5Q8NGB2 326 aa16.15■□□□□ 0.18
SIX3-201ENST00000260653 TMEM263Q8WUH6 116 aaKnown RBP16.15■□□□□ 0.18
SIX3-201ENST00000260653 PTH2Q96A98 100 aa16.15■□□□□ 0.18
SIX3-201ENST00000260653 KIR2DL5BA0A0G2JN68 375 aa16.15■□□□□ 0.18
SIX3-201ENST00000260653 KIR2DL5BA0A0G2JPC4 375 aa16.15■□□□□ 0.18
SIX3-201ENST00000260653 M0QY20 66 aa16.15■□□□□ 0.18
SIX3-201ENST00000260653 PIK3CD-AS1Q5SR53 167 aa16.15■□□□□ 0.18
SIX3-201ENST00000260653 KIR2DL5AQ8N109 375 aa16.15■□□□□ 0.18
SIX3-201ENST00000260653 MAP1LC3CQ9BXW4 147 aa16.15■□□□□ 0.18
SIX3-201ENST00000260653 H0Y8G0 127 aa16.14■□□□□ 0.17
SIX3-201ENST00000260653 FCER1GP30273 86 aa16.14■□□□□ 0.17
SIX3-201ENST00000260653 RIPPLY3P57055 190 aa16.14■□□□□ 0.17
SIX3-201ENST00000260653 TMEM158Q8WZ71 300 aa16.14■□□□□ 0.17
SIX3-201ENST00000260653 CST9LQ9H4G1 147 aa16.14■□□□□ 0.17
SIX3-201ENST00000260653 A8MWV9 139 aa16.14■□□□□ 0.17
SIX3-201ENST00000260653 LAGE3Q14657 143 aa16.14■□□□□ 0.17
SIX3-201ENST00000260653 NEGR1Q7Z3B1 354 aa16.13■□□□□ 0.17
SIX3-201ENST00000260653 ST20Q9HBF5 79 aa16.13■□□□□ 0.17
SIX3-201ENST00000260653 CFAP126Q5VTH2 177 aa16.13■□□□□ 0.17
SIX3-201ENST00000260653 UFSP1Q6NVU6 142 aa16.13■□□□□ 0.17
SIX3-201ENST00000260653 ATOH7Q8N100 152 aa16.13■□□□□ 0.17
SIX3-201ENST00000260653 WIPF1O43516 503 aa16.12■□□□□ 0.17
SIX3-201ENST00000260653 TRAV26-1A0A087WT03 109 aa16.12■□□□□ 0.17
SIX3-201ENST00000260653 C18orf15Q96N68 181 aa16.11■□□□□ 0.17
SIX3-201ENST00000260653 PKD1L1Q8TDX9 2849 aa16.11■□□□□ 0.17
SIX3-201ENST00000260653 TRGV1A0A0A0MS02 117 aa16.1■□□□□ 0.17
SIX3-201ENST00000260653 C12orf54Q6X4T0 127 aa16.1■□□□□ 0.17
SIX3-201ENST00000260653 NBEAL2Q6ZNJ1 2754 aa16.1■□□□□ 0.17
SIX3-201ENST00000260653 K7ERU9 68 aa16.1■□□□□ 0.17
SIX3-201ENST00000260653 POLR2KP53803 58 aaKnown RBP16.1■□□□□ 0.17
SIX3-201ENST00000260653 DEFB104AQ8WTQ1 72 aa16.1■□□□□ 0.17
SIX3-201ENST00000260653 PLAC8L1A1L4L8 177 aa16.09■□□□□ 0.17
SIX3-201ENST00000260653 SDHAF1A6NFY7 115 aa16.09■□□□□ 0.17
SIX3-201ENST00000260653 C16orf74Q96GX8 76 aa16.09■□□□□ 0.17
SIX3-201ENST00000260653 VAMP8Q9BV40 100 aa16.09■□□□□ 0.17
SIX3-201ENST00000260653 PAM16Q9Y3D7 125 aa16.09■□□□□ 0.17
SIX3-201ENST00000260653 TRBV6-5A0A0K0K1A5 114 aa16.09■□□□□ 0.17
SIX3-201ENST00000260653 PET117Q6UWS5 81 aa16.09■□□□□ 0.17
SIX3-201ENST00000260653 Q6ZTI0 123 aa16.09■□□□□ 0.17
SIX3-201ENST00000260653 RRN3P1Q2M238 152 aa16.08■□□□□ 0.17
SIX3-201ENST00000260653 IFI27L1Q96BM0 104 aa16.08■□□□□ 0.17
SIX3-201ENST00000260653 NOP10Q9NPE3 64 aaKnown RBP16.08■□□□□ 0.17
SIX3-201ENST00000260653 NUDT3O95989 172 aa16.08■□□□□ 0.16
SIX3-201ENST00000260653 P0DMU3 169 aa16.08■□□□□ 0.16
SIX3-201ENST00000260653 FAM231AP0DMU4 169 aa16.08■□□□□ 0.16
SIX3-201ENST00000260653 FAM231CP0DMU5 169 aa16.08■□□□□ 0.16
SIX3-201ENST00000260653 RPL32P62910 135 aaKnown RBP16.08■□□□□ 0.16
SIX3-201ENST00000260653 Q6ZSN1 163 aa16.08■□□□□ 0.16
SIX3-201ENST00000260653 RS1O15537 224 aa16.07■□□□□ 0.16
SIX3-201ENST00000260653 OXLD1Q5BKU9 147 aa16.07■□□□□ 0.16
SIX3-201ENST00000260653 PMCHL2Q9BQD1 86 aa16.07■□□□□ 0.16
SIX3-201ENST00000260653 A4D1N5 150 aa16.07■□□□□ 0.16
SIX3-201ENST00000260653 ORMDL2Q53FV1 153 aa16.07■□□□□ 0.16
SIX3-201ENST00000260653 K7EMI3 77 aa16.05■□□□□ 0.16
SIX3-201ENST00000260653 RHODO00212 210 aa16.05■□□□□ 0.16
SIX3-201ENST00000260653 DAZ2Q13117 558 aaKnown RBP16.05■□□□□ 0.16
SIX3-201ENST00000260653 LINC01545Q5VT33 79 aa16.05■□□□□ 0.16
SIX3-201ENST00000260653 EDA2RQ9HAV5 297 aa16.05■□□□□ 0.16
SIX3-201ENST00000260653 CMYA5Q8N3K9 4069 aa16.05■□□□□ 0.16
SIX3-201ENST00000260653 TRBV27A0A0K0K1C4 114 aa16.05■□□□□ 0.16
SIX3-201ENST00000260653 H7C1H1 209 aa16.05■□□□□ 0.16
SIX3-201ENST00000260653 VCYO14598 125 aa16.05■□□□□ 0.16
SIX3-201ENST00000260653 HERV-K104P63124 156 aa16.05■□□□□ 0.16
SIX3-201ENST00000260653 Q9UF83 564 aa16.05■□□□□ 0.16
SIX3-201ENST00000260653 LGALS9BQ3B8N2 356 aa16.03■□□□□ 0.16
SIX3-201ENST00000260653 KIR2DL4Q99706 377 aa16.03■□□□□ 0.16
SIX3-201ENST00000260653 MIEN1Q9BRT3 115 aa16.03■□□□□ 0.16
SIX3-201ENST00000260653 SCGB1A1P11684 91 aa16.02■□□□□ 0.15
SIX3-201ENST00000260653 IGHV3-53P01767 116 aa16.01■□□□□ 0.15
SIX3-201ENST00000260653 SPATA45Q537H7 98 aa16.01■□□□□ 0.15
SIX3-201ENST00000260653 ZFP2Q6ZN57 461 aa16.01■□□□□ 0.15
SIX3-201ENST00000260653 C2orf66Q6UXQ4 117 aa16.01■□□□□ 0.15
SIX3-201ENST00000260653 TOMM6Q96B49 74 aa16.01■□□□□ 0.15
SIX3-201ENST00000260653 EMP1P54849 157 aa16■□□□□ 0.15
SIX3-201ENST00000260653 GAGE12BA1L429 117 aa16■□□□□ 0.15
SIX3-201ENST00000260653 GAGE7O76087 117 aa16■□□□□ 0.15
SIX3-201ENST00000260653 GAGE12FP0CL80 117 aa16■□□□□ 0.15
SIX3-201ENST00000260653 GAGE12GP0CL81 117 aa16■□□□□ 0.15
SIX3-201ENST00000260653 GAGE12IP0CL82 117 aa16■□□□□ 0.15
SIX3-201ENST00000260653 KIR2DL5BQ8NHK3 375 aa16■□□□□ 0.15
SIX3-201ENST00000260653 OVOL2Q9BRP0 275 aa16■□□□□ 0.15
SIX3-201ENST00000260653 X6R8D5 127 aa16■□□□□ 0.15
SIX3-201ENST00000260653 TRAV9-2A0A087WT02 112 aa15.99■□□□□ 0.15
SIX3-201ENST00000260653 DEFB135Q30KP9 77 aa15.99■□□□□ 0.15
SIX3-201ENST00000260653 ATP5LO75964 103 aa15.99■□□□□ 0.15
SIX3-201ENST00000260653 IGHV4-30-4P0DP06 118 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms