RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 OPRPNQ99935 248 aaPredicted RBP12.58□□□□□ -0.39
CDK4-201ENST00000257904 CELSR1Q9NYQ6 3014 aa12.58□□□□□ -0.4
CDK4-201ENST00000257904 UTP20O75691 2785 aaKnown RBP12.58□□□□□ -0.4
CDK4-201ENST00000257904 TMEM223A0PJW6 202 aa12.58□□□□□ -0.4
CDK4-201ENST00000257904 A8MWV9 139 aa12.58□□□□□ -0.4
CDK4-201ENST00000257904 CKS1BP61024 79 aa12.58□□□□□ -0.4
CDK4-201ENST00000257904 LEPROTO15243 131 aa12.57□□□□□ -0.4
CDK4-201ENST00000257904 TRPT1Q86TN4 253 aaKnown RBP12.57□□□□□ -0.4
CDK4-201ENST00000257904 TRAV12-2A0A075B6T6 113 aa12.57□□□□□ -0.4
CDK4-201ENST00000257904 ZNF688P0C7X2 276 aa12.57□□□□□ -0.4
CDK4-201ENST00000257904 CRYBA4P53673 196 aa12.57□□□□□ -0.4
CDK4-201ENST00000257904 Q8N1Y9 231 aa12.57□□□□□ -0.4
CDK4-201ENST00000257904 IGHV4-30-2A0A087WSY4 118 aa12.56□□□□□ -0.4
CDK4-201ENST00000257904 A4D1N5 150 aa12.56□□□□□ -0.4
CDK4-201ENST00000257904 TGFAP01135 160 aa12.56□□□□□ -0.4
CDK4-201ENST00000257904 SPINK8P0C7L1 97 aa12.56□□□□□ -0.4
CDK4-201ENST00000257904 SCGB1C2P0DMR2 95 aa12.56□□□□□ -0.4
CDK4-201ENST00000257904 P0DMU3 169 aa12.56□□□□□ -0.4
CDK4-201ENST00000257904 FAM231AP0DMU4 169 aa12.56□□□□□ -0.4
CDK4-201ENST00000257904 FAM231CP0DMU5 169 aa12.56□□□□□ -0.4
CDK4-201ENST00000257904 NRGNQ92686 78 aa12.56□□□□□ -0.4
CDK4-201ENST00000257904 LRRK2Q5S007 2527 aa12.56□□□□□ -0.4
CDK4-201ENST00000257904 FAM208BQ5VWN6 2430 aa12.55□□□□□ -0.4
CDK4-201ENST00000257904 A0A0J9YX75 114 aa12.55□□□□□ -0.4
CDK4-201ENST00000257904 C20orf203Q8NBC4 194 aa12.55□□□□□ -0.4
CDK4-201ENST00000257904 VCX2Q9H322 139 aa12.55□□□□□ -0.4
CDK4-201ENST00000257904 EIF4EBP3O60516 100 aaPredicted RBP12.55□□□□□ -0.4
CDK4-201ENST00000257904 IGKV3-20P01619 116 aa12.55□□□□□ -0.4
CDK4-201ENST00000257904 MT-ATP8P03928 68 aa12.55□□□□□ -0.4
CDK4-201ENST00000257904 ZNF22P17026 224 aaPredicted RBP12.55□□□□□ -0.4
CDK4-201ENST00000257904 XGP55808 180 aa12.55□□□□□ -0.4
CDK4-201ENST00000257904 Q6ZUT4 128 aa12.55□□□□□ -0.4
CDK4-201ENST00000257904 SPG11Q96JI7 2443 aa12.54□□□□□ -0.4
CDK4-201ENST00000257904 IGHV1OR15-1A0A075B7D0 117 aa12.54□□□□□ -0.4
CDK4-201ENST00000257904 RHODO00212 210 aa12.54□□□□□ -0.4
CDK4-201ENST00000257904 ANKRD29Q8N6D5 301 aa12.54□□□□□ -0.4
CDK4-201ENST00000257904 IGHV3-33P01772 117 aa12.53□□□□□ -0.4
CDK4-201ENST00000257904 TMEM263Q8WUH6 116 aaKnown RBP12.53□□□□□ -0.4
CDK4-201ENST00000257904 RAX2Q96IS3 184 aa12.53□□□□□ -0.4
CDK4-201ENST00000257904 VPS13CQ709C8 3753 aa12.53□□□□□ -0.4
CDK4-201ENST00000257904 CRYBG3Q68DQ2 2970 aa12.53□□□□□ -0.4
CDK4-201ENST00000257904 A0A0B4J2C4 111 aa12.53□□□□□ -0.4
CDK4-201ENST00000257904 I3L3M4 83 aa12.53□□□□□ -0.4
CDK4-201ENST00000257904 SNRPD3P62318 126 aaKnown RBP12.53□□□□□ -0.4
CDK4-201ENST00000257904 TMEM95Q3KNT9 176 aa12.53□□□□□ -0.4
CDK4-201ENST00000257904 IGHV3-64A0A075B6Q5 118 aa12.52□□□□□ -0.4
CDK4-201ENST00000257904 TRAV2A0A0B4J234 112 aa12.52□□□□□ -0.4
CDK4-201ENST00000257904 PSMB8P28062 276 aa12.52□□□□□ -0.4
CDK4-201ENST00000257904 IGLV4-3A0A075B6K6 122 aa12.52□□□□□ -0.41
CDK4-201ENST00000257904 SPINK13Q1W4C9 94 aa12.52□□□□□ -0.41
CDK4-201ENST00000257904 ZNF580Q9UK33 172 aa12.52□□□□□ -0.41
CDK4-201ENST00000257904 A0A0J9YXV3 536 aa12.51□□□□□ -0.41
CDK4-201ENST00000257904 K7EQG2 157 aa12.51□□□□□ -0.41
CDK4-201ENST00000257904 MUSTN1Q8IVN3 82 aa12.51□□□□□ -0.41
CDK4-201ENST00000257904 ERG28Q9UKR5 140 aa12.51□□□□□ -0.41
CDK4-201ENST00000257904 M0QXV9 152 aa12.5□□□□□ -0.41
CDK4-201ENST00000257904 SLC25A20O43772 301 aa12.5□□□□□ -0.41
CDK4-201ENST00000257904 GEMIN7Q9H840 131 aaKnown RBP12.5□□□□□ -0.41
CDK4-201ENST00000257904 C9JAW5 83 aa12.49□□□□□ -0.41
CDK4-201ENST00000257904 MSMBP08118 114 aa12.49□□□□□ -0.41
CDK4-201ENST00000257904 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.49□□□□□ -0.41
CDK4-201ENST00000257904 M0R2P5 195 aa12.49□□□□□ -0.41
CDK4-201ENST00000257904 A0A0J9YXY3 114 aa12.48□□□□□ -0.41
CDK4-201ENST00000257904 H7C2G1 150 aa12.48□□□□□ -0.41
CDK4-201ENST00000257904 C10orf99Q6UWK7 81 aa12.47□□□□□ -0.41
CDK4-201ENST00000257904 CHD6Q8TD26 2715 aa12.47□□□□□ -0.41
CDK4-201ENST00000257904 MAP1AP78559 2803 aaPredicted RBP12.47□□□□□ -0.41
CDK4-201ENST00000257904 CELSR2Q9HCU4 2923 aa12.47□□□□□ -0.41
CDK4-201ENST00000257904 TRGV11A0A075B6L2 103 aa12.47□□□□□ -0.41
CDK4-201ENST00000257904 TMEM262E9PQX1 116 aa12.47□□□□□ -0.41
CDK4-201ENST00000257904 DSCR9P59020 149 aa12.47□□□□□ -0.41
CDK4-201ENST00000257904 KMT2BQ9UMN6 2715 aaPredicted RBP12.47□□□□□ -0.41
CDK4-201ENST00000257904 AVPP01185 164 aa12.46□□□□□ -0.41
CDK4-201ENST00000257904 IGHV3-30-3P0DP02 117 aa12.46□□□□□ -0.41
CDK4-201ENST00000257904 PYGO1Q9Y3Y4 419 aa12.46□□□□□ -0.41
CDK4-201ENST00000257904 B4DSR2 109 aa12.46□□□□□ -0.42
CDK4-201ENST00000257904 RNF152Q8N8N0 203 aa12.46□□□□□ -0.42
CDK4-201ENST00000257904 FAM104AQ969W3 186 aa12.46□□□□□ -0.42
CDK4-201ENST00000257904 EDA2RQ9HAV5 297 aa12.46□□□□□ -0.42
CDK4-201ENST00000257904 FBN2P35556 2912 aa12.45□□□□□ -0.42
CDK4-201ENST00000257904 CD28P10747 220 aa12.45□□□□□ -0.42
CDK4-201ENST00000257904 Q1RN00 199 aa12.45□□□□□ -0.42
CDK4-201ENST00000257904 SPXQ9BT56 116 aa12.45□□□□□ -0.42
CDK4-201ENST00000257904 TIMM21Q9BVV7 248 aa12.45□□□□□ -0.42
CDK4-201ENST00000257904 ELANEP08246 267 aa12.44□□□□□ -0.42
CDK4-201ENST00000257904 MRPS36P82909 103 aaKnown RBP12.44□□□□□ -0.42
CDK4-201ENST00000257904 ATXN8Q156A1 80 aa12.44□□□□□ -0.42
CDK4-201ENST00000257904 LITAFQ99732 161 aa12.44□□□□□ -0.42
CDK4-201ENST00000257904 USP9YO00507 2555 aaPredicted RBP12.44□□□□□ -0.42
CDK4-201ENST00000257904 TRAV26-1A0A087WT03 109 aa12.44□□□□□ -0.42
CDK4-201ENST00000257904 TMEM89A2RUT3 159 aa12.44□□□□□ -0.42
CDK4-201ENST00000257904 SYNJ2BPP57105 145 aa12.44□□□□□ -0.42
CDK4-201ENST00000257904 ADARB2-AS1A8MUL3 147 aa12.43□□□□□ -0.42
CDK4-201ENST00000257904 IGHV4-59P01825 116 aa12.43□□□□□ -0.42
CDK4-201ENST00000257904 CENPEQ02224 2701 aa12.43□□□□□ -0.42
CDK4-201ENST00000257904 RBMY1A1P0DJD3 496 aaKnown RBP12.42□□□□□ -0.42
CDK4-201ENST00000257904 RBMY1CP0DJD4 496 aa12.42□□□□□ -0.42
CDK4-201ENST00000257904 RBMY1FQ15415 496 aaKnown RBP12.42□□□□□ -0.42
CDK4-201ENST00000257904 LINC01620Q4KN68 170 aa12.42□□□□□ -0.42
CDK4-201ENST00000257904 IGHV3-73A0A0B4J1V6 119 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms