RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 PRORYQ9H606 182 aa8.99□□□□□ -0.97
USHBP1-201ENST00000252597 A0A0J9YY99 117 aa8.99□□□□□ -0.97
USHBP1-201ENST00000252597 SYNJ2BPP57105 145 aa8.99□□□□□ -0.97
USHBP1-201ENST00000252597 PROK1P58294 105 aa8.99□□□□□ -0.97
USHBP1-201ENST00000252597 GPHB5Q86YW7 130 aa8.99□□□□□ -0.97
USHBP1-201ENST00000252597 ZNRF2Q8NHG8 242 aa8.99□□□□□ -0.97
USHBP1-201ENST00000252597 ERG28Q9UKR5 140 aa8.99□□□□□ -0.97
USHBP1-201ENST00000252597 IGHV4-61A0A0C4DH41 118 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 GNLYP22749 145 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 ANAPC13Q9BS18 74 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 PRO1854Q9UHT4 67 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 TRAV12-1A0A0B4J245 112 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 CFC1BP0CG36 223 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 CFC1P0CG37 223 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 ATP5J2P56134 94 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 LMO4P61968 165 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 LYRM7Q5U5X0 104 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 Q6ZSV7 163 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 NTN5Q8WTR8 489 aaPredicted RBP8.98□□□□□ -0.97
USHBP1-201ENST00000252597 CRYGDP07320 174 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 CD28P10747 220 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 ID1P41134 155 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 CRYBA4P53673 196 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 EBI3Q14213 229 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 MUSTN1Q8IVN3 82 aa8.98□□□□□ -0.97
USHBP1-201ENST00000252597 CHD6Q8TD26 2715 aa8.97□□□□□ -0.97
USHBP1-201ENST00000252597 NIPBLQ6KC79 2804 aaeCLIP8.97□□□□□ -0.97
USHBP1-201ENST00000252597 C19orf84I3L1E1 186 aa8.97□□□□□ -0.97
USHBP1-201ENST00000252597 TSHBP01222 138 aa8.97□□□□□ -0.97
USHBP1-201ENST00000252597 DAZ1Q9NQZ3 744 aaKnown RBP8.97□□□□□ -0.97
USHBP1-201ENST00000252597 SLC25A20O43772 301 aa8.97□□□□□ -0.97
USHBP1-201ENST00000252597 CFAP126Q5VTH2 177 aa8.97□□□□□ -0.97
USHBP1-201ENST00000252597 C11orf71Q6IPW1 123 aa8.97□□□□□ -0.97
USHBP1-201ENST00000252597 Q8N1Y9 231 aa8.97□□□□□ -0.97
USHBP1-201ENST00000252597 C11orf44Q8N8P7 122 aa8.97□□□□□ -0.97
USHBP1-201ENST00000252597 PIFOQ8TCI5 191 aa8.97□□□□□ -0.97
USHBP1-201ENST00000252597 SRSF2Q01130 221 aaKnown RBP8.97□□□□□ -0.97
USHBP1-201ENST00000252597 C3orf56Q8N813 242 aa8.97□□□□□ -0.97
USHBP1-201ENST00000252597 PSMG3-AS1Q96PY0 264 aa8.97□□□□□ -0.97
USHBP1-201ENST00000252597 PRO0461Q9UI25 63 aa8.97□□□□□ -0.97
USHBP1-201ENST00000252597 SS18L2Q9UHA2 77 aa8.96□□□□□ -0.97
USHBP1-201ENST00000252597 IGHV1-69DA0A0B4J2H0 117 aa8.96□□□□□ -0.98
USHBP1-201ENST00000252597 IGKV3OR2-268A0A0C4DH90 116 aa8.96□□□□□ -0.98
USHBP1-201ENST00000252597 IGHV1-69P01742 117 aa8.96□□□□□ -0.98
USHBP1-201ENST00000252597 RNF183Q96D59 192 aa8.96□□□□□ -0.98
USHBP1-201ENST00000252597 NDUFA4O00483 81 aa8.95□□□□□ -0.98
USHBP1-201ENST00000252597 GATA3P23771 443 aa8.95□□□□□ -0.98
USHBP1-201ENST00000252597 DEFB136Q30KP8 78 aa8.95□□□□□ -0.98
USHBP1-201ENST00000252597 DGAT2L7PQ6IED9 249 aa8.95□□□□□ -0.98
USHBP1-201ENST00000252597 C10orf126Q8N4M7 172 aa8.95□□□□□ -0.98
USHBP1-201ENST00000252597 PPDPFLQ8WWR9 84 aa8.95□□□□□ -0.98
USHBP1-201ENST00000252597 FHL3Q13643 280 aa8.95□□□□□ -0.98
USHBP1-201ENST00000252597 Q6ZUT4 128 aa8.95□□□□□ -0.98
USHBP1-201ENST00000252597 IGLV4-69A0A075B6H9 119 aa8.95□□□□□ -0.98
USHBP1-201ENST00000252597 TEX29Q8N6K0 151 aa8.95□□□□□ -0.98
USHBP1-201ENST00000252597 TMEM190Q8WZ59 177 aa8.95□□□□□ -0.98
USHBP1-201ENST00000252597 FAM223BA6NKX1 122 aa8.94□□□□□ -0.98
USHBP1-201ENST00000252597 TEN1Q86WV5 123 aa8.94□□□□□ -0.98
USHBP1-201ENST00000252597 FAM223AQ8IWN6 122 aa8.94□□□□□ -0.98
USHBP1-201ENST00000252597 ITLN2Q8WWU7 325 aaPredicted RBP8.94□□□□□ -0.98
USHBP1-201ENST00000252597 B5MCH6 92 aa8.94□□□□□ -0.98
USHBP1-201ENST00000252597 PPP1R17O96001 155 aa8.94□□□□□ -0.98
USHBP1-201ENST00000252597 SNRPD3P62318 126 aaKnown RBP8.94□□□□□ -0.98
USHBP1-201ENST00000252597 FBXL19-AS1Q494R0 122 aa8.94□□□□□ -0.98
USHBP1-201ENST00000252597 CARD19Q96LW7 228 aa8.94□□□□□ -0.98
USHBP1-201ENST00000252597 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.93□□□□□ -0.98
USHBP1-201ENST00000252597 IGKV2-29A2NJV5 120 aaPredicted RBP8.93□□□□□ -0.98
USHBP1-201ENST00000252597 SNCGO76070 127 aa8.93□□□□□ -0.98
USHBP1-201ENST00000252597 SPATA25Q9BR10 227 aa8.93□□□□□ -0.98
USHBP1-201ENST00000252597 Q9UF83 564 aa8.93□□□□□ -0.98
USHBP1-201ENST00000252597 TEX49A0A1B0GTD5 131 aa8.93□□□□□ -0.98
USHBP1-201ENST00000252597 MRPL53Q96EL3 112 aaKnown RBP8.93□□□□□ -0.98
USHBP1-201ENST00000252597 CDIP1Q9H305 208 aa8.93□□□□□ -0.98
USHBP1-201ENST00000252597 TNFRSF18Q9Y5U5 241 aa8.93□□□□□ -0.98
USHBP1-201ENST00000252597 MXRA5Q9NR99 2828 aa8.93□□□□□ -0.98
USHBP1-201ENST00000252597 IGHV4-59P01825 116 aa8.92□□□□□ -0.98
USHBP1-201ENST00000252597 PAPPA-AS1Q5QFB9 102 aa8.92□□□□□ -0.98
USHBP1-201ENST00000252597 IGHV3-53P01767 116 aa8.92□□□□□ -0.98
USHBP1-201ENST00000252597 IGHV3-30P01768 117 aa8.92□□□□□ -0.98
USHBP1-201ENST00000252597 ELANEP08246 267 aa8.92□□□□□ -0.98
USHBP1-201ENST00000252597 IGHV3-30-5P0DP03 117 aa8.92□□□□□ -0.98
USHBP1-201ENST00000252597 TTC32Q5I0X7 151 aa8.92□□□□□ -0.98
USHBP1-201ENST00000252597 FLNAP21333 2647 aaKnown RBP8.92□□□□□ -0.98
USHBP1-201ENST00000252597 IGHV4-4A0A075B6R2 117 aa8.92□□□□□ -0.98
USHBP1-201ENST00000252597 IGIPA6NJ69 53 aa8.92□□□□□ -0.98
USHBP1-201ENST00000252597 ZFAND6Q6FIF0 208 aa8.92□□□□□ -0.98
USHBP1-201ENST00000252597 CLEC2BQ92478 149 aa8.92□□□□□ -0.98
USHBP1-201ENST00000252597 CCL19Q99731 98 aa8.92□□□□□ -0.98
USHBP1-201ENST00000252597 U3KQE9 123 aa8.92□□□□□ -0.98
USHBP1-201ENST00000252597 UBE2D1P51668 147 aa8.91□□□□□ -0.98
USHBP1-201ENST00000252597 TIMM21Q9BVV7 248 aa8.91□□□□□ -0.98
USHBP1-201ENST00000252597 IGHV4-30-2A0A087WSY4 118 aa8.91□□□□□ -0.98
USHBP1-201ENST00000252597 RNF223E7ERA6 249 aa8.91□□□□□ -0.98
USHBP1-201ENST00000252597 FLNBO75369 2602 aaKnown RBP8.9□□□□□ -0.98
USHBP1-201ENST00000252597 LINC01546A6NGU7 62 aa8.9□□□□□ -0.98
USHBP1-201ENST00000252597 DEFB131AP59861 70 aa8.9□□□□□ -0.98
USHBP1-201ENST00000252597 GAGE2BQ13066 116 aa8.9□□□□□ -0.98
USHBP1-201ENST00000252597 GAGE2EQ4V326 116 aa8.9□□□□□ -0.98
USHBP1-201ENST00000252597 SLC25A29Q8N8R3 303 aa8.9□□□□□ -0.98
USHBP1-201ENST00000252597 PIMREGQ9BSJ6 248 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms