RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ZNF479Q96JC4 524 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 HIST1H2BNQ99877 126 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 HIST1H2BMQ99879 126 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 NIT2Q9NQR4 276 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 MEGF8Q7Z7M0 2845 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 K7EMI3 77 aa9.16□□□□□ -0.94
LSM8-201ENST00000249299 DEFB4AO15263 64 aa9.16□□□□□ -0.94
LSM8-201ENST00000249299 TNFRSF6BO95407 300 aa9.16□□□□□ -0.94
LSM8-201ENST00000249299 NRACQ8N912 160 aa9.16□□□□□ -0.94
LSM8-201ENST00000249299 TRGV4A0A0C4DH28 118 aa9.15□□□□□ -0.94
LSM8-201ENST00000249299 A0A0J9YWU9 116 aa9.15□□□□□ -0.94
LSM8-201ENST00000249299 FHL2Q14192 279 aa9.15□□□□□ -0.94
LSM8-201ENST00000249299 RHOHQ15669 191 aa9.15□□□□□ -0.94
LSM8-201ENST00000249299 C18orf32Q8TCD1 76 aa9.15□□□□□ -0.94
LSM8-201ENST00000249299 MAP1LC3AQ9H492 121 aa9.15□□□□□ -0.94
LSM8-201ENST00000249299 NXT2Q9NPJ8 142 aaKnown RBP9.15□□□□□ -0.94
LSM8-201ENST00000249299 PRO0255Q9UI72 69 aa9.15□□□□□ -0.94
LSM8-201ENST00000249299 CELA1Q9UNI1 258 aa9.15□□□□□ -0.94
LSM8-201ENST00000249299 K7EQD1 137 aa9.14□□□□□ -0.95
LSM8-201ENST00000249299 TCAPO15273 167 aa9.14□□□□□ -0.95
LSM8-201ENST00000249299 SUMO2P61956 95 aaKnown RBP9.14□□□□□ -0.95
LSM8-201ENST00000249299 C12orf74Q32Q52 190 aa9.14□□□□□ -0.95
LSM8-201ENST00000249299 C11orf45Q8TAV5 145 aa9.14□□□□□ -0.95
LSM8-201ENST00000249299 PRADC1Q9BSG0 188 aa9.14□□□□□ -0.95
LSM8-201ENST00000249299 HHLA3Q9XRX5 114 aa9.14□□□□□ -0.95
LSM8-201ENST00000249299 TRAV26-2A0A0B4J265 109 aa9.13□□□□□ -0.95
LSM8-201ENST00000249299 H3BNG1 76 aa9.13□□□□□ -0.95
LSM8-201ENST00000249299 NPYP01303 97 aa9.13□□□□□ -0.95
LSM8-201ENST00000249299 PMCHP20382 165 aa9.13□□□□□ -0.95
LSM8-201ENST00000249299 SLC25A29Q8N8R3 303 aa9.13□□□□□ -0.95
LSM8-201ENST00000249299 ST20Q9HBF5 79 aa9.13□□□□□ -0.95
LSM8-201ENST00000249299 TRBV7-3A0A075B6L6 115 aa9.12□□□□□ -0.95
LSM8-201ENST00000249299 IGHV3-73A0A0B4J1V6 119 aa9.12□□□□□ -0.95
LSM8-201ENST00000249299 TRBV27A0A0K0K1C4 114 aa9.12□□□□□ -0.95
LSM8-201ENST00000249299 LINC01546A6NGU7 62 aa9.12□□□□□ -0.95
LSM8-201ENST00000249299 SMKR1H3BMG3 65 aa9.12□□□□□ -0.95
LSM8-201ENST00000249299 VCYO14598 125 aa9.12□□□□□ -0.95
LSM8-201ENST00000249299 NCR2O95944 276 aa9.12□□□□□ -0.95
LSM8-201ENST00000249299 POLR2KP53803 58 aaKnown RBP9.12□□□□□ -0.95
LSM8-201ENST00000249299 RPL36AP83881 106 aaKnown RBP9.12□□□□□ -0.95
LSM8-201ENST00000249299 Q6ZSN1 163 aa9.12□□□□□ -0.95
LSM8-201ENST00000249299 RPL36ALQ969Q0 106 aaKnown RBP9.12□□□□□ -0.95
LSM8-201ENST00000249299 CHCHD1Q96BP2 118 aaKnown RBP9.12□□□□□ -0.95
LSM8-201ENST00000249299 TNFRSF18Q9Y5U5 241 aa9.12□□□□□ -0.95
LSM8-201ENST00000249299 S100A6P06703 90 aa9.11□□□□□ -0.95
LSM8-201ENST00000249299 ESDP10768 282 aa9.11□□□□□ -0.95
LSM8-201ENST00000249299 CRYBA4P53673 196 aa9.11□□□□□ -0.95
LSM8-201ENST00000249299 SH2D6Q7Z4S9 175 aa9.11□□□□□ -0.95
LSM8-201ENST00000249299 BAGE3Q86Y29 109 aa9.11□□□□□ -0.95
LSM8-201ENST00000249299 Q8N8P6 123 aa9.11□□□□□ -0.95
LSM8-201ENST00000249299 NEXN-AS1Q8NBZ9 246 aa9.11□□□□□ -0.95
LSM8-201ENST00000249299 PRSS3P2Q8NHM4 247 aa9.11□□□□□ -0.95
LSM8-201ENST00000249299 TMEM70Q9BUB7 260 aa9.11□□□□□ -0.95
LSM8-201ENST00000249299 SMIM2Q9BVW6 85 aa9.11□□□□□ -0.95
LSM8-201ENST00000249299 SDHAF1A6NFY7 115 aa9.1□□□□□ -0.95
LSM8-201ENST00000249299 GAS8-AS1O95177 125 aa9.1□□□□□ -0.95
LSM8-201ENST00000249299 LINC00614P0C842 121 aa9.1□□□□□ -0.95
LSM8-201ENST00000249299 HOXA5P20719 270 aa9.1□□□□□ -0.95
LSM8-201ENST00000249299 G0S2P27469 103 aa9.1□□□□□ -0.95
LSM8-201ENST00000249299 DAZ4Q86SG3 579 aaKnown RBP9.1□□□□□ -0.95
LSM8-201ENST00000249299 RPL39LQ96EH5 51 aaKnown RBP9.1□□□□□ -0.95
LSM8-201ENST00000249299 DAZ3Q9NR90 486 aaKnown RBP9.1□□□□□ -0.95
LSM8-201ENST00000249299 TENM3Q9P273 2699 aa9.1□□□□□ -0.95
LSM8-201ENST00000249299 IGLV2-18A0A075B6J9 118 aa9.09□□□□□ -0.95
LSM8-201ENST00000249299 LINC01549A6NIU2 74 aa9.09□□□□□ -0.95
LSM8-201ENST00000249299 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.09□□□□□ -0.95
LSM8-201ENST00000249299 PAX4O43316 350 aa9.09□□□□□ -0.95
LSM8-201ENST00000249299 FA2HQ7L5A8 372 aa9.09□□□□□ -0.95
LSM8-201ENST00000249299 PACRGQ96M98 296 aaPredicted RBP9.09□□□□□ -0.95
LSM8-201ENST00000249299 KIR2DL4Q99706 377 aa9.09□□□□□ -0.95
LSM8-201ENST00000249299 AP5S1Q9NUS5 200 aa9.09□□□□□ -0.95
LSM8-201ENST00000249299 TRAV26-1A0A087WT03 109 aa9.08□□□□□ -0.96
LSM8-201ENST00000249299 TRAV10A0A0B4J240 114 aa9.08□□□□□ -0.96
LSM8-201ENST00000249299 F5H768 121 aa9.08□□□□□ -0.96
LSM8-201ENST00000249299 I3L3M4 83 aa9.08□□□□□ -0.96
LSM8-201ENST00000249299 NDUFA6P56556 154 aa9.08□□□□□ -0.96
LSM8-201ENST00000249299 TMEM97Q5BJF2 176 aa9.08□□□□□ -0.96
LSM8-201ENST00000249299 Q6ZTC4 211 aa9.08□□□□□ -0.96
LSM8-201ENST00000249299 NIT1Q86X76 327 aa9.08□□□□□ -0.96
LSM8-201ENST00000249299 LINC00694P0DN24 101 aa9.07□□□□□ -0.96
LSM8-201ENST00000249299 IFI27P40305 119 aaPredicted RBP9.07□□□□□ -0.96
LSM8-201ENST00000249299 UBE2D3P61077 147 aa9.07□□□□□ -0.96
LSM8-201ENST00000249299 UBE2D2P62837 147 aa9.07□□□□□ -0.96
LSM8-201ENST00000249299 ORMDL2Q53FV1 153 aa9.07□□□□□ -0.96
LSM8-201ENST00000249299 KRTAP9-2Q9BYQ4 174 aa9.07□□□□□ -0.96
LSM8-201ENST00000249299 NACAE9PAV3 2078 aa9.07□□□□□ -0.96
LSM8-201ENST00000249299 DNAH9Q9NYC9 4486 aa9.07□□□□□ -0.96
LSM8-201ENST00000249299 LOC389332A0A1B0GUA5 103 aa9.06□□□□□ -0.96
LSM8-201ENST00000249299 C5orf52A6NGY3 159 aa9.06□□□□□ -0.96
LSM8-201ENST00000249299 P0DMU3 169 aa9.06□□□□□ -0.96
LSM8-201ENST00000249299 FAM231AP0DMU4 169 aa9.06□□□□□ -0.96
LSM8-201ENST00000249299 FAM231CP0DMU5 169 aa9.06□□□□□ -0.96
LSM8-201ENST00000249299 MRPL23Q16540 153 aaKnown RBP9.06□□□□□ -0.96
LSM8-201ENST00000249299 IQCJQ1A5X6 159 aa9.06□□□□□ -0.96
LSM8-201ENST00000249299 ZNRF2Q8NHG8 242 aa9.06□□□□□ -0.96
LSM8-201ENST00000249299 GTSF1LQ9H1H1 148 aa9.06□□□□□ -0.96
LSM8-201ENST00000249299 STAB2Q8WWQ8 2551 aa9.06□□□□□ -0.96
LSM8-201ENST00000249299 HUWE1Q7Z6Z7 4374 aaKnown RBP9.06□□□□□ -0.96
LSM8-201ENST00000249299 DEFB131BA0A096LNP1 70 aa9.05□□□□□ -0.96
LSM8-201ENST00000249299 HSBP1O75506 76 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms