RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 TSHBP01222 138 aa16.15■□□□□ 0.18
RNF39-201ENST00000244360 TRGV11A0A075B6L2 103 aa16.14■□□□□ 0.17
RNF39-201ENST00000244360 F5H697 171 aa16.14■□□□□ 0.17
RNF39-201ENST00000244360 C11orf86A6NJI1 115 aa16.14■□□□□ 0.17
RNF39-201ENST00000244360 WFDC11Q8NEX6 87 aa16.14■□□□□ 0.17
RNF39-201ENST00000244360 SDHAF1A6NFY7 115 aa16.13■□□□□ 0.17
RNF39-201ENST00000244360 KNCNA6PVL3 124 aa16.13■□□□□ 0.17
RNF39-201ENST00000244360 DEFB131AP59861 70 aa16.13■□□□□ 0.17
RNF39-201ENST00000244360 RBMY1A1P0DJD3 496 aaKnown RBP16.13■□□□□ 0.17
RNF39-201ENST00000244360 RBMY1CP0DJD4 496 aa16.13■□□□□ 0.17
RNF39-201ENST00000244360 RBMY1FQ15415 496 aaKnown RBP16.13■□□□□ 0.17
RNF39-201ENST00000244360 TMEM61Q8N0U2 210 aa16.13■□□□□ 0.17
RNF39-201ENST00000244360 SPANXB1Q9NS25 103 aaPredicted RBP16.13■□□□□ 0.17
RNF39-201ENST00000244360 ZNF256Q9Y2P7 627 aaPredicted RBP16.13■□□□□ 0.17
RNF39-201ENST00000244360 H3BMM0 161 aa16.12■□□□□ 0.17
RNF39-201ENST00000244360 Q6ZSV7 163 aa16.12■□□□□ 0.17
RNF39-201ENST00000244360 ITPR3Q14573 2671 aa16.11■□□□□ 0.17
RNF39-201ENST00000244360 MYO9AB2RTY4 2548 aa16.11■□□□□ 0.17
RNF39-201ENST00000244360 H3BMG7 143 aa16.11■□□□□ 0.17
RNF39-201ENST00000244360 M0QY20 66 aa16.11■□□□□ 0.17
RNF39-201ENST00000244360 SRSF9Q13242 221 aaKnown RBP eCLIP16.11■□□□□ 0.17
RNF39-201ENST00000244360 RHOHQ15669 191 aa16.11■□□□□ 0.17
RNF39-201ENST00000244360 GAGE13Q4V321 117 aa16.11■□□□□ 0.17
RNF39-201ENST00000244360 DLX4Q92988 240 aaPredicted RBP16.11■□□□□ 0.17
RNF39-201ENST00000244360 UBE2D1P51668 147 aa16.11■□□□□ 0.17
RNF39-201ENST00000244360 CD300EQ496F6 205 aaPredicted RBP16.11■□□□□ 0.17
RNF39-201ENST00000244360 FAM74A4Q5TZK3 123 aa16.11■□□□□ 0.17
RNF39-201ENST00000244360 MORN3Q6PF18 240 aaPredicted RBP16.11■□□□□ 0.17
RNF39-201ENST00000244360 DUX3Q96PT4 197 aa16.11■□□□□ 0.17
RNF39-201ENST00000244360 KLHL30-AS1Q8NEE0 82 aa16.1■□□□□ 0.17
RNF39-201ENST00000244360 RBMY1BA6NDE4 496 aaKnown RBP16.1■□□□□ 0.17
RNF39-201ENST00000244360 RBMY1EA6NEQ0 496 aaKnown RBP16.1■□□□□ 0.17
RNF39-201ENST00000244360 DNAJC9-AS1A6NH13 148 aa16.1■□□□□ 0.17
RNF39-201ENST00000244360 RBMY1DP0C7P1 496 aaKnown RBP16.1■□□□□ 0.17
RNF39-201ENST00000244360 WFDC2Q14508 124 aa16.1■□□□□ 0.17
RNF39-201ENST00000244360 NSUN5P1Q3KNT7 163 aa16.1■□□□□ 0.17
RNF39-201ENST00000244360 ZNF876PQ49A33 203 aa16.1■□□□□ 0.17
RNF39-201ENST00000244360 PLEKHB2Q96CS7 222 aa16.1■□□□□ 0.17
RNF39-201ENST00000244360 KHDC1LQ5JSQ8 128 aa16.09■□□□□ 0.17
RNF39-201ENST00000244360 MRPL16Q9NX20 251 aaKnown RBP16.09■□□□□ 0.17
RNF39-201ENST00000244360 PGPEP1Q9NXJ5 209 aa16.09■□□□□ 0.17
RNF39-201ENST00000244360 SORL1Q92673 2214 aa16.09■□□□□ 0.17
RNF39-201ENST00000244360 ZNF56Q15929 161 aa16.09■□□□□ 0.17
RNF39-201ENST00000244360 TRPT1Q86TN4 253 aaKnown RBP16.09■□□□□ 0.17
RNF39-201ENST00000244360 RPL39P62891 51 aaKnown RBP16.08■□□□□ 0.16
RNF39-201ENST00000244360 DEFB114Q30KQ6 69 aa16.07■□□□□ 0.16
RNF39-201ENST00000244360 LYRM7Q5U5X0 104 aa16.07■□□□□ 0.16
RNF39-201ENST00000244360 MAP6D1Q9H9H5 199 aa16.07■□□□□ 0.16
RNF39-201ENST00000244360 PRO0461Q9UI25 63 aa16.07■□□□□ 0.16
RNF39-201ENST00000244360 A0A0J9YY99 117 aa16.07■□□□□ 0.16
RNF39-201ENST00000244360 SPAG8Q99932 426 aaPredicted RBP16.07■□□□□ 0.16
RNF39-201ENST00000244360 ZNF469Q96JG9 3925 aaPredicted RBP16.06■□□□□ 0.16
RNF39-201ENST00000244360 DYNLRB2Q8TF09 96 aa16.06■□□□□ 0.16
RNF39-201ENST00000244360 EDA2RQ9HAV5 297 aa16.06■□□□□ 0.16
RNF39-201ENST00000244360 TLN2Q9Y4G6 2542 aa16.06■□□□□ 0.16
RNF39-201ENST00000244360 TMEM170BQ5T4T1 132 aa16.05■□□□□ 0.16
RNF39-201ENST00000244360 NFE4Q86UQ8 179 aa16.05■□□□□ 0.16
RNF39-201ENST00000244360 ESM1Q9NQ30 184 aa16.03■□□□□ 0.16
RNF39-201ENST00000244360 EMP1P54849 157 aa16.03■□□□□ 0.16
RNF39-201ENST00000244360 KRTAP1-1Q07627 177 aa16.03■□□□□ 0.16
RNF39-201ENST00000244360 FHL3Q13643 280 aa16.03■□□□□ 0.16
RNF39-201ENST00000244360 ETDBQ3ZM63 59 aa16.03■□□□□ 0.16
RNF39-201ENST00000244360 LINC00467Q9BRT7 94 aa16.03■□□□□ 0.16
RNF39-201ENST00000244360 AKAP9Q99996 3911 aa16.02■□□□□ 0.16
RNF39-201ENST00000244360 PIK3CD-AS1Q5SR53 167 aa16.02■□□□□ 0.16
RNF39-201ENST00000244360 SLC25A29Q8N8R3 303 aa16.02■□□□□ 0.16
RNF39-201ENST00000244360 ZNRF2Q8NHG8 242 aa16.02■□□□□ 0.16
RNF39-201ENST00000244360 PTH2Q96A98 100 aa16.02■□□□□ 0.16
RNF39-201ENST00000244360 RAX2Q96IS3 184 aa16.02■□□□□ 0.16
RNF39-201ENST00000244360 TSPAN13O95857 204 aa16.02■□□□□ 0.15
RNF39-201ENST00000244360 HIST2H2BCQ6DN03 193 aa16.02■□□□□ 0.15
RNF39-201ENST00000244360 I3L3M4 83 aa16.01■□□□□ 0.15
RNF39-201ENST00000244360 SCGB1A1P11684 91 aa16.01■□□□□ 0.15
RNF39-201ENST00000244360 LGALS3P17931 250 aaKnown RBP16.01■□□□□ 0.15
RNF39-201ENST00000244360 HIST2H2BDQ6DRA6 164 aa16.01■□□□□ 0.15
RNF39-201ENST00000244360 CLUHP3Q96NS8 147 aa16.01■□□□□ 0.15
RNF39-201ENST00000244360 TENM4Q6N022 2769 aa16.01■□□□□ 0.15
RNF39-201ENST00000244360 TMEM238C9JI98 176 aa16■□□□□ 0.15
RNF39-201ENST00000244360 J3QQQ9 107 aa16■□□□□ 0.15
RNF39-201ENST00000244360 ATP6V0E2Q8NHE4 81 aa16■□□□□ 0.15
RNF39-201ENST00000244360 IGHV3-30P01768 117 aa16■□□□□ 0.15
RNF39-201ENST00000244360 IGHV3-30-5P0DP03 117 aa16■□□□□ 0.15
RNF39-201ENST00000244360 UBE2D3P61077 147 aa16■□□□□ 0.15
RNF39-201ENST00000244360 UBE2D2P62837 147 aa16■□□□□ 0.15
RNF39-201ENST00000244360 NDUFA11Q86Y39 141 aa16■□□□□ 0.15
RNF39-201ENST00000244360 DEFB104AQ8WTQ1 72 aa16■□□□□ 0.15
RNF39-201ENST00000244360 NBPF19A0A087WUL8 3843 aa16■□□□□ 0.15
RNF39-201ENST00000244360 TRAV25A0A0B4J276 109 aa15.99■□□□□ 0.15
RNF39-201ENST00000244360 TSPEAR-AS2P59090 65 aa15.99■□□□□ 0.15
RNF39-201ENST00000244360 SH2D6Q7Z4S9 175 aa15.99■□□□□ 0.15
RNF39-201ENST00000244360 C20orf203Q8NBC4 194 aa15.99■□□□□ 0.15
RNF39-201ENST00000244360 SIGMAR1Q99720 223 aa15.99■□□□□ 0.15
RNF39-201ENST00000244360 SONP18583 2426 aaKnown RBP15.99■□□□□ 0.15
RNF39-201ENST00000244360 M0R2P5 195 aa15.99■□□□□ 0.15
RNF39-201ENST00000244360 LEPROTO15243 131 aa15.99■□□□□ 0.15
RNF39-201ENST00000244360 SPATA25Q9BR10 227 aa15.99■□□□□ 0.15
RNF39-201ENST00000244360 FLNAP21333 2647 aaKnown RBP15.98■□□□□ 0.15
RNF39-201ENST00000244360 GAGE12HA6NDE8 117 aa15.98■□□□□ 0.15
RNF39-201ENST00000244360 ZNF415Q09FC8 603 aa15.98■□□□□ 0.15
RNF39-201ENST00000244360 CFAP126Q5VTH2 177 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms