RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 OR5A1Q8NGJ0 315 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 RNASE8Q8TDE3 154 aaKnown RBP5.79□□□□□ -1.48
CXCR4-201ENST00000241393 RPL39LQ96EH5 51 aaKnown RBP5.79□□□□□ -1.48
CXCR4-201ENST00000241393 C9orf85Q96MD7 179 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 VPREB3Q9UKI3 123 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 CHTOPQ9Y3Y2 248 aaKnown RBP5.79□□□□□ -1.48
CXCR4-201ENST00000241393 USP24Q9UPU5 2620 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 POLR2KP53803 58 aaKnown RBP5.79□□□□□ -1.48
CXCR4-201ENST00000241393 RBX1P62877 108 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 CEND1Q8N111 149 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 UBE2E2Q96LR5 201 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 CSTL1Q9H114 145 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 CST9LQ9H4G1 147 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 CYSLTR1Q9Y271 337 aa5.79□□□□□ -1.48
CXCR4-201ENST00000241393 IGKV3-7A0A075B6H7 116 aa5.78□□□□□ -1.48
CXCR4-201ENST00000241393 TRAV2A0A0B4J234 112 aa5.78□□□□□ -1.48
CXCR4-201ENST00000241393 IGHV3-16A0A0C4DH30 117 aa5.78□□□□□ -1.48
CXCR4-201ENST00000241393 A0A1W2PPM0 123 aa5.78□□□□□ -1.48
CXCR4-201ENST00000241393 OR11H12B2RN74 326 aa5.78□□□□□ -1.48
CXCR4-201ENST00000241393 E9PLD3 99 aa5.78□□□□□ -1.48
CXCR4-201ENST00000241393 H3BUT2 72 aa5.78□□□□□ -1.48
CXCR4-201ENST00000241393 CD7P09564 240 aa5.78□□□□□ -1.48
CXCR4-201ENST00000241393 RIPPLY3P57055 190 aa5.78□□□□□ -1.48
CXCR4-201ENST00000241393 OR11H1Q8NG94 326 aa5.78□□□□□ -1.48
CXCR4-201ENST00000241393 OR11H2Q8NH07 326 aa5.78□□□□□ -1.48
CXCR4-201ENST00000241393 BAALCQ8WXS3 180 aa5.78□□□□□ -1.48
CXCR4-201ENST00000241393 TMEM141Q96I45 108 aa5.78□□□□□ -1.48
CXCR4-201ENST00000241393 TIMM17AQ99595 171 aa5.78□□□□□ -1.48
CXCR4-201ENST00000241393 TRBV27A0A0K0K1C4 114 aa5.77□□□□□ -1.49
CXCR4-201ENST00000241393 FABP2P12104 132 aa5.77□□□□□ -1.49
CXCR4-201ENST00000241393 COX6B1P14854 86 aa5.77□□□□□ -1.49
CXCR4-201ENST00000241393 FXYD2P54710 66 aa5.77□□□□□ -1.49
CXCR4-201ENST00000241393 TCTAP57738 103 aa5.77□□□□□ -1.49
CXCR4-201ENST00000241393 OCIAD2Q56VL3 154 aa5.77□□□□□ -1.49
CXCR4-201ENST00000241393 FOXI2Q6ZQN5 318 aa5.77□□□□□ -1.49
CXCR4-201ENST00000241393 KIR2DL4Q99706 377 aa5.77□□□□□ -1.49
CXCR4-201ENST00000241393 SPG11Q96JI7 2443 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 IGHV1OR15-1A0A075B7D0 117 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 TRAV12-3A0A0B4J271 114 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 MYMXA0A1B0GTQ4 84 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 IGIPA6NJ69 53 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 A8MTW9 85 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 K7ERU9 68 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 TGFAP01135 160 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 ZNF688P0C7X2 276 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 RHOHQ15669 191 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 ZFP2Q6ZN57 461 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 LRRC75A-AS1Q8N1F1 130 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 MAPKAPK5-AS1Q8N8E1 139 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 PHLDA1Q8WV24 401 aaPredicted RBP5.76□□□□□ -1.49
CXCR4-201ENST00000241393 ZNF702PQ9H963 129 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 EDA2RQ9HAV5 297 aa5.76□□□□□ -1.49
CXCR4-201ENST00000241393 ZNF256Q9Y2P7 627 aaPredicted RBP5.76□□□□□ -1.49
CXCR4-201ENST00000241393 ASH1LQ9NR48 2969 aaKnown RBP5.76□□□□□ -1.49
CXCR4-201ENST00000241393 TRBV7-3A0A075B6L6 115 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 A0A1B0GWB2 263 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 HERVK_113P61574 105 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 PMVKQ15126 192 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 Q8N2B8 174 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 TTTY13Q9BZ97 58 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 SPCS1Q9Y6A9 102 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 MUC4Q99102 2169 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 MYO18BQ8IUG5 2567 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 USP9XQ93008 2570 aaPredicted RBP5.75□□□□□ -1.49
CXCR4-201ENST00000241393 CSPG4Q6UVK1 2322 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 SDHAF1A6NFY7 115 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 IGHV4-31P0DP07 118 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 SYNJ2BPP57105 145 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 NSUN5P1Q3KNT7 163 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 AMTNQ6UX39 209 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 TRPT1Q86TN4 253 aaKnown RBP5.75□□□□□ -1.49
CXCR4-201ENST00000241393 TP53TG1Q9Y2A0 90 aa5.75□□□□□ -1.49
CXCR4-201ENST00000241393 M0QY20 66 aa5.74□□□□□ -1.49
CXCR4-201ENST00000241393 CRYGDP07320 174 aa5.74□□□□□ -1.49
CXCR4-201ENST00000241393 C10orf99Q6UWK7 81 aa5.74□□□□□ -1.49
CXCR4-201ENST00000241393 NRGNQ92686 78 aa5.74□□□□□ -1.49
CXCR4-201ENST00000241393 PTH2Q96A98 100 aa5.74□□□□□ -1.49
CXCR4-201ENST00000241393 RAB37Q96AX2 223 aa5.74□□□□□ -1.49
CXCR4-201ENST00000241393 HIST1H4GQ99525 98 aa5.74□□□□□ -1.49
CXCR4-201ENST00000241393 PRADC1Q9BSG0 188 aa5.74□□□□□ -1.49
CXCR4-201ENST00000241393 NHP2Q9NX24 153 aaKnown RBP5.74□□□□□ -1.49
CXCR4-201ENST00000241393 FLNCQ14315 2725 aa5.74□□□□□ -1.49
CXCR4-201ENST00000241393 CSMD1Q96PZ7 3565 aa5.74□□□□□ -1.49
CXCR4-201ENST00000241393 ZFYVE26Q68DK2 2539 aa5.73□□□□□ -1.49
CXCR4-201ENST00000241393 IGLV5-45A0A087WSX0 123 aa5.73□□□□□ -1.49
CXCR4-201ENST00000241393 C11orf86A6NJI1 115 aa5.73□□□□□ -1.49
CXCR4-201ENST00000241393 TSHBP01222 138 aa5.73□□□□□ -1.49
CXCR4-201ENST00000241393 C12orf74Q32Q52 190 aa5.73□□□□□ -1.49
CXCR4-201ENST00000241393 NEGR1Q7Z3B1 354 aa5.73□□□□□ -1.49
CXCR4-201ENST00000241393 TEX29Q8N6K0 151 aa5.73□□□□□ -1.49
CXCR4-201ENST00000241393 JPT2Q9H910 190 aa5.73□□□□□ -1.49
CXCR4-201ENST00000241393 MDFICQ9P1T7 246 aa5.73□□□□□ -1.49
CXCR4-201ENST00000241393 PRRC2AP48634 2157 aaKnown RBP5.73□□□□□ -1.49
CXCR4-201ENST00000241393 IGLV4-69A0A075B6H9 119 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 IGLL5B9A064 214 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 SPINK13Q1W4C9 94 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 ZNF876PQ49A33 203 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 TCTEX1D4Q5JR98 221 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 NFE4Q86UQ8 179 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 TMEM86BQ8N661 226 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms