RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 A0A096LNT2 108 aa12.02□□□□□ -0.49
LTBR-201ENST00000228918 CFAP126Q5VTH2 177 aa12.02□□□□□ -0.49
LTBR-201ENST00000228918 RNF152Q8N8N0 203 aa12.02□□□□□ -0.49
LTBR-201ENST00000228918 J3QLI3 93 aa12.01□□□□□ -0.49
LTBR-201ENST00000228918 SMCPP49901 116 aaPredicted RBP12.01□□□□□ -0.49
LTBR-201ENST00000228918 NFE4Q86UQ8 179 aa12.01□□□□□ -0.49
LTBR-201ENST00000228918 DUX5Q96PT3 197 aa12.01□□□□□ -0.49
LTBR-201ENST00000228918 ELANEP08246 267 aa12□□□□□ -0.49
LTBR-201ENST00000228918 P0DMU3 169 aa12□□□□□ -0.49
LTBR-201ENST00000228918 FAM231AP0DMU4 169 aa12□□□□□ -0.49
LTBR-201ENST00000228918 FAM231CP0DMU5 169 aa12□□□□□ -0.49
LTBR-201ENST00000228918 HOXD3P31249 432 aaPredicted RBP12□□□□□ -0.49
LTBR-201ENST00000228918 AMELXQ99217 191 aa12□□□□□ -0.49
LTBR-201ENST00000228918 VPREB3Q9UKI3 123 aa12□□□□□ -0.49
LTBR-201ENST00000228918 DOPEY2Q9Y3R5 2298 aa12□□□□□ -0.49
LTBR-201ENST00000228918 TSPAN13O95857 204 aa12□□□□□ -0.49
LTBR-201ENST00000228918 SPINK8P0C7L1 97 aa12□□□□□ -0.49
LTBR-201ENST00000228918 TRGV11A0A075B6L2 103 aa11.99□□□□□ -0.49
LTBR-201ENST00000228918 OPRPNQ99935 248 aaPredicted RBP11.99□□□□□ -0.49
LTBR-201ENST00000228918 SORL1Q92673 2214 aa11.99□□□□□ -0.49
LTBR-201ENST00000228918 C20orf203Q8NBC4 194 aa11.99□□□□□ -0.49
LTBR-201ENST00000228918 UBE2E2Q96LR5 201 aa11.99□□□□□ -0.49
LTBR-201ENST00000228918 ZNF702PQ9H963 129 aa11.99□□□□□ -0.49
LTBR-201ENST00000228918 IGSF10Q6WRI0 2623 aa11.98□□□□□ -0.49
LTBR-201ENST00000228918 J3QQQ9 107 aa11.98□□□□□ -0.49
LTBR-201ENST00000228918 IGHV3-30P01768 117 aa11.98□□□□□ -0.49
LTBR-201ENST00000228918 IGHV3-30-5P0DP03 117 aa11.98□□□□□ -0.49
LTBR-201ENST00000228918 FHL3Q13643 280 aa11.98□□□□□ -0.49
LTBR-201ENST00000228918 SLC25A29Q8N8R3 303 aa11.98□□□□□ -0.49
LTBR-201ENST00000228918 I3L3M4 83 aa11.98□□□□□ -0.49
LTBR-201ENST00000228918 TGFAP01135 160 aa11.98□□□□□ -0.49
LTBR-201ENST00000228918 MT-ATP8P03928 68 aa11.98□□□□□ -0.49
LTBR-201ENST00000228918 RBMY1A1P0DJD3 496 aaKnown RBP11.98□□□□□ -0.49
LTBR-201ENST00000228918 RBMY1CP0DJD4 496 aa11.98□□□□□ -0.49
LTBR-201ENST00000228918 RBMY1FQ15415 496 aaKnown RBP11.98□□□□□ -0.49
LTBR-201ENST00000228918 NDUFA11Q86Y39 141 aa11.98□□□□□ -0.49
LTBR-201ENST00000228918 CSMD2Q7Z408 3487 aa11.97□□□□□ -0.49
LTBR-201ENST00000228918 Q6ZUT4 128 aa11.97□□□□□ -0.49
LTBR-201ENST00000228918 MAPK1IP1LQ8NDC0 245 aa11.97□□□□□ -0.49
LTBR-201ENST00000228918 DLX4Q92988 240 aaPredicted RBP11.97□□□□□ -0.49
LTBR-201ENST00000228918 UTP20O75691 2785 aaKnown RBP11.97□□□□□ -0.49
LTBR-201ENST00000228918 TMEM223A0PJW6 202 aa11.97□□□□□ -0.49
LTBR-201ENST00000228918 UBE2D3P61077 147 aa11.97□□□□□ -0.49
LTBR-201ENST00000228918 UBE2D2P62837 147 aa11.97□□□□□ -0.49
LTBR-201ENST00000228918 ANKRD17O75179 2603 aaKnown RBP11.96□□□□□ -0.49
LTBR-201ENST00000228918 USP9YO00507 2555 aaPredicted RBP11.96□□□□□ -0.49
LTBR-201ENST00000228918 FSHBP01225 129 aa11.96□□□□□ -0.49
LTBR-201ENST00000228918 LGALS3P17931 250 aaKnown RBP11.96□□□□□ -0.49
LTBR-201ENST00000228918 XGP55808 180 aa11.95□□□□□ -0.5
LTBR-201ENST00000228918 Q6YL49 198 aa11.95□□□□□ -0.5
LTBR-201ENST00000228918 EDA2RQ9HAV5 297 aa11.95□□□□□ -0.5
LTBR-201ENST00000228918 ZANQ9Y493 2812 aa11.95□□□□□ -0.5
LTBR-201ENST00000228918 IGLV4-3A0A075B6K6 122 aa11.95□□□□□ -0.5
LTBR-201ENST00000228918 LEPROTO15243 131 aa11.95□□□□□ -0.5
LTBR-201ENST00000228918 LOC107984156A0A0G2JMH3 177 aa11.94□□□□□ -0.5
LTBR-201ENST00000228918 KNCNA6PVL3 124 aa11.94□□□□□ -0.5
LTBR-201ENST00000228918 CFC1BP0CG36 223 aa11.94□□□□□ -0.5
LTBR-201ENST00000228918 CFC1P0CG37 223 aa11.94□□□□□ -0.5
LTBR-201ENST00000228918 ZNF22P17026 224 aaPredicted RBP11.94□□□□□ -0.5
LTBR-201ENST00000228918 ARL17AQ8IVW1 177 aa11.94□□□□□ -0.5
LTBR-201ENST00000228918 ERG28Q9UKR5 140 aa11.94□□□□□ -0.5
LTBR-201ENST00000228918 SFTA2Q6UW10 78 aa11.94□□□□□ -0.5
LTBR-201ENST00000228918 USP24Q9UPU5 2620 aa11.93□□□□□ -0.5
LTBR-201ENST00000228918 A8MTW9 85 aa11.93□□□□□ -0.5
LTBR-201ENST00000228918 RHODO00212 210 aa11.93□□□□□ -0.5
LTBR-201ENST00000228918 PSMB2P49721 201 aa11.93□□□□□ -0.5
LTBR-201ENST00000228918 SLURP1P55000 103 aa11.93□□□□□ -0.5
LTBR-201ENST00000228918 LYRM7Q5U5X0 104 aa11.93□□□□□ -0.5
LTBR-201ENST00000228918 CARD19Q96LW7 228 aa11.93□□□□□ -0.5
LTBR-201ENST00000228918 MYO18BQ8IUG5 2567 aa11.92□□□□□ -0.5
LTBR-201ENST00000228918 A0A0J9YXV3 536 aa11.92□□□□□ -0.5
LTBR-201ENST00000228918 DEFB131AP59861 70 aa11.92□□□□□ -0.5
LTBR-201ENST00000228918 C10orf126Q8N4M7 172 aa11.92□□□□□ -0.5
LTBR-201ENST00000228918 PPDPFLQ8WWR9 84 aa11.92□□□□□ -0.5
LTBR-201ENST00000228918 VCX2Q9H322 139 aa11.92□□□□□ -0.5
LTBR-201ENST00000228918 CREBBPQ92793 2442 aa11.92□□□□□ -0.5
LTBR-201ENST00000228918 NACAE9PAV3 2078 aa11.92□□□□□ -0.5
LTBR-201ENST00000228918 DEFB136Q30KP8 78 aa11.91□□□□□ -0.5
LTBR-201ENST00000228918 C18orf65Q6ZTR6 163 aa11.91□□□□□ -0.5
LTBR-201ENST00000228918 RNF183Q96D59 192 aa11.91□□□□□ -0.5
LTBR-201ENST00000228918 BEX4Q9NWD9 120 aaPredicted RBP11.91□□□□□ -0.5
LTBR-201ENST00000228918 IGHV3-73A0A0B4J1V6 119 aa11.91□□□□□ -0.5
LTBR-201ENST00000228918 RBMY1BA6NDE4 496 aaKnown RBP11.91□□□□□ -0.5
LTBR-201ENST00000228918 RBMY1EA6NEQ0 496 aaKnown RBP11.91□□□□□ -0.5
LTBR-201ENST00000228918 RBMY1DP0C7P1 496 aaKnown RBP11.91□□□□□ -0.5
LTBR-201ENST00000228918 TEN1Q86WV5 123 aa11.91□□□□□ -0.5
LTBR-201ENST00000228918 FBN2P35556 2912 aa11.91□□□□□ -0.5
LTBR-201ENST00000228918 CR1P17927 2039 aa11.91□□□□□ -0.5
LTBR-201ENST00000228918 EPG5Q9HCE0 2579 aa11.9□□□□□ -0.5
LTBR-201ENST00000228918 H3BMM0 161 aa11.9□□□□□ -0.5
LTBR-201ENST00000228918 HTN1P15515 57 aa11.9□□□□□ -0.5
LTBR-201ENST00000228918 PROK1P58294 105 aa11.9□□□□□ -0.5
LTBR-201ENST00000228918 PYGO1Q9Y3Y4 419 aa11.9□□□□□ -0.5
LTBR-201ENST00000228918 IGHV3-64A0A075B6Q5 118 aa11.9□□□□□ -0.5
LTBR-201ENST00000228918 IGHV4-31P0DP07 118 aa11.9□□□□□ -0.5
LTBR-201ENST00000228918 FAM104AQ969W3 186 aa11.9□□□□□ -0.5
LTBR-201ENST00000228918 PTH2Q96A98 100 aa11.9□□□□□ -0.5
LTBR-201ENST00000228918 SBSPONQ8IVN8 264 aa11.89□□□□□ -0.51
LTBR-201ENST00000228918 PRO1854Q9UHT4 67 aa11.89□□□□□ -0.51
LTBR-201ENST00000228918 POLQO75417 2590 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms