RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 DNAL4O96015 105 aa11□□□□□ -0.65
PRDM4-201ENST00000228437 C9orf47Q6ZRZ4 202 aa11□□□□□ -0.65
PRDM4-201ENST00000228437 CNFNQ9BYD5 112 aa11□□□□□ -0.65
PRDM4-201ENST00000228437 TRIAP1O43715 76 aa10.99□□□□□ -0.65
PRDM4-201ENST00000228437 HOXD3P31249 432 aaPredicted RBP10.99□□□□□ -0.65
PRDM4-201ENST00000228437 MDFICQ9P1T7 246 aa10.99□□□□□ -0.65
PRDM4-201ENST00000228437 P0DMU3 169 aa10.99□□□□□ -0.65
PRDM4-201ENST00000228437 FAM231AP0DMU4 169 aa10.99□□□□□ -0.65
PRDM4-201ENST00000228437 FAM231CP0DMU5 169 aa10.99□□□□□ -0.65
PRDM4-201ENST00000228437 ICOSQ9Y6W8 199 aa10.99□□□□□ -0.65
PRDM4-201ENST00000228437 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.99□□□□□ -0.65
PRDM4-201ENST00000228437 IGKV2-29A2NJV5 120 aaPredicted RBP10.99□□□□□ -0.65
PRDM4-201ENST00000228437 BPESC1Q9GZL8 116 aa10.99□□□□□ -0.65
PRDM4-201ENST00000228437 ZFAND3Q9H8U3 227 aa10.99□□□□□ -0.65
PRDM4-201ENST00000228437 TRGV11A0A075B6L2 103 aa10.98□□□□□ -0.65
PRDM4-201ENST00000228437 ZFP36P26651 326 aaKnown RBP10.98□□□□□ -0.65
PRDM4-201ENST00000228437 PLA2G2CQ5R387 149 aa10.98□□□□□ -0.65
PRDM4-201ENST00000228437 LY6G5BQ8NDX9 201 aa10.98□□□□□ -0.65
PRDM4-201ENST00000228437 UBE2D3P61077 147 aa10.98□□□□□ -0.65
PRDM4-201ENST00000228437 UBE2D2P62837 147 aa10.98□□□□□ -0.65
PRDM4-201ENST00000228437 MINOS1Q5TGZ0 78 aa10.98□□□□□ -0.65
PRDM4-201ENST00000228437 MINOS1-NBL1R4GNA1 71 aa10.98□□□□□ -0.65
PRDM4-201ENST00000228437 TRBV10-2A0A0K0K1G8 114 aa10.98□□□□□ -0.65
PRDM4-201ENST00000228437 H3BUX3 64 aa10.98□□□□□ -0.65
PRDM4-201ENST00000228437 LEPROTO15243 131 aa10.98□□□□□ -0.65
PRDM4-201ENST00000228437 EPG5Q9HCE0 2579 aa10.98□□□□□ -0.65
PRDM4-201ENST00000228437 PRRC2AP48634 2157 aaKnown RBP10.97□□□□□ -0.65
PRDM4-201ENST00000228437 LY6LH3BQJ8 138 aa10.97□□□□□ -0.65
PRDM4-201ENST00000228437 ZFAND2AQ8N6M9 145 aa10.97□□□□□ -0.65
PRDM4-201ENST00000228437 RHODO00212 210 aa10.97□□□□□ -0.65
PRDM4-201ENST00000228437 IGHV3-53P01767 116 aa10.96□□□□□ -0.65
PRDM4-201ENST00000228437 CLPSL1A2RUU4 121 aa10.96□□□□□ -0.65
PRDM4-201ENST00000228437 IGHV3-30-3P0DP02 117 aa10.96□□□□□ -0.65
PRDM4-201ENST00000228437 DMDP11532 3685 aa10.96□□□□□ -0.66
PRDM4-201ENST00000228437 IGHV1-69DA0A0B4J2H0 117 aa10.96□□□□□ -0.66
PRDM4-201ENST00000228437 I3L3M4 83 aa10.96□□□□□ -0.66
PRDM4-201ENST00000228437 C19orf54Q5BKX5 351 aa10.95□□□□□ -0.66
PRDM4-201ENST00000228437 FN1P02751 2386 aaKnown RBP10.95□□□□□ -0.66
PRDM4-201ENST00000228437 A0A0J9YXY3 114 aa10.95□□□□□ -0.66
PRDM4-201ENST00000228437 ELANEP08246 267 aa10.95□□□□□ -0.66
PRDM4-201ENST00000228437 SRSF2Q01130 221 aaKnown RBP10.95□□□□□ -0.66
PRDM4-201ENST00000228437 PRIMA1Q86XR5 153 aa10.95□□□□□ -0.66
PRDM4-201ENST00000228437 MOB4Q9Y3A3 225 aa10.95□□□□□ -0.66
PRDM4-201ENST00000228437 C11orf68Q9H3H3 251 aaKnown RBP10.95□□□□□ -0.66
PRDM4-201ENST00000228437 HIST1H4AP62805 103 aaKnown RBP10.94□□□□□ -0.66
PRDM4-201ENST00000228437 CFAP161Q6P656 301 aa10.94□□□□□ -0.66
PRDM4-201ENST00000228437 LINC01587Q99440 93 aa10.94□□□□□ -0.66
PRDM4-201ENST00000228437 TNFRSF13BO14836 293 aaPredicted RBP10.94□□□□□ -0.66
PRDM4-201ENST00000228437 IGLV4-69A0A075B6H9 119 aa10.93□□□□□ -0.66
PRDM4-201ENST00000228437 CRYGDP07320 174 aa10.93□□□□□ -0.66
PRDM4-201ENST00000228437 RNASE3P12724 160 aaKnown RBP10.93□□□□□ -0.66
PRDM4-201ENST00000228437 IGFL3Q6UXB1 125 aa10.93□□□□□ -0.66
PRDM4-201ENST00000228437 YAE1D1Q9NRH1 226 aa10.93□□□□□ -0.66
PRDM4-201ENST00000228437 OOSP1A8MZH6 123 aa10.93□□□□□ -0.66
PRDM4-201ENST00000228437 ZNF22P17026 224 aaPredicted RBP10.93□□□□□ -0.66
PRDM4-201ENST00000228437 BLCAPP62952 87 aa10.93□□□□□ -0.66
PRDM4-201ENST00000228437 DAZ1Q9NQZ3 744 aaKnown RBP10.93□□□□□ -0.66
PRDM4-201ENST00000228437 PRM2P04554 102 aa10.93□□□□□ -0.66
PRDM4-201ENST00000228437 ITLN2Q8WWU7 325 aaPredicted RBP10.92□□□□□ -0.66
PRDM4-201ENST00000228437 TIMM17AQ99595 171 aa10.92□□□□□ -0.66
PRDM4-201ENST00000228437 CENPVL3A0A0U1RRI6 287 aa10.92□□□□□ -0.66
PRDM4-201ENST00000228437 IGKV3D-7A0A0C4DH55 119 aa10.91□□□□□ -0.66
PRDM4-201ENST00000228437 LGALS9O00182 355 aa10.91□□□□□ -0.66
PRDM4-201ENST00000228437 PROK1P58294 105 aa10.91□□□□□ -0.66
PRDM4-201ENST00000228437 Q9H8V8 135 aa10.91□□□□□ -0.66
PRDM4-201ENST00000228437 TSHBP01222 138 aa10.91□□□□□ -0.66
PRDM4-201ENST00000228437 IGHV1OR15-1A0A075B7D0 117 aa10.91□□□□□ -0.66
PRDM4-201ENST00000228437 LY6DQ14210 128 aa10.9□□□□□ -0.66
PRDM4-201ENST00000228437 EDN2P20800 178 aa10.9□□□□□ -0.66
PRDM4-201ENST00000228437 TMEM263Q8WUH6 116 aaKnown RBP10.9□□□□□ -0.66
PRDM4-201ENST00000228437 Q9HAA7 133 aa10.9□□□□□ -0.66
PRDM4-201ENST00000228437 MRPL53Q96EL3 112 aaKnown RBP10.9□□□□□ -0.66
PRDM4-201ENST00000228437 BAALC-AS2P0C853 105 aa10.89□□□□□ -0.67
PRDM4-201ENST00000228437 LENEPQ9Y5L5 61 aa10.89□□□□□ -0.67
PRDM4-201ENST00000228437 MUC3AQ02505 3323 aa10.89□□□□□ -0.67
PRDM4-201ENST00000228437 TINCRA0A1B0GVN0 87 aa10.89□□□□□ -0.67
PRDM4-201ENST00000228437 IGIPA6NJ69 53 aa10.89□□□□□ -0.67
PRDM4-201ENST00000228437 C20orf203Q8NBC4 194 aa10.89□□□□□ -0.67
PRDM4-201ENST00000228437 ABCA2Q9BZC7 2435 aa10.89□□□□□ -0.67
PRDM4-201ENST00000228437 NDUFA4O00483 81 aa10.89□□□□□ -0.67
PRDM4-201ENST00000228437 COX6B1P14854 86 aa10.89□□□□□ -0.67
PRDM4-201ENST00000228437 LINC00158P58513 81 aa10.89□□□□□ -0.67
PRDM4-201ENST00000228437 GPHB5Q86YW7 130 aa10.89□□□□□ -0.67
PRDM4-201ENST00000228437 POLQO75417 2590 aa10.88□□□□□ -0.67
PRDM4-201ENST00000228437 TMEM223A0PJW6 202 aa10.88□□□□□ -0.67
PRDM4-201ENST00000228437 KLK5Q9Y337 293 aaPredicted RBP10.88□□□□□ -0.67
PRDM4-201ENST00000228437 HIVEP3Q5T1R4 2406 aa10.88□□□□□ -0.67
PRDM4-201ENST00000228437 LINC01619G3V211 115 aa10.88□□□□□ -0.67
PRDM4-201ENST00000228437 UBE2L6O14933 153 aa10.88□□□□□ -0.67
PRDM4-201ENST00000228437 H7C423 109 aa10.88□□□□□ -0.67
PRDM4-201ENST00000228437 NXPH4O95158 308 aa10.88□□□□□ -0.67
PRDM4-201ENST00000228437 UBE2E2Q96LR5 201 aa10.88□□□□□ -0.67
PRDM4-201ENST00000228437 FAM223BA6NKX1 122 aa10.87□□□□□ -0.67
PRDM4-201ENST00000228437 DEFB131AP59861 70 aa10.87□□□□□ -0.67
PRDM4-201ENST00000228437 FAM223AQ8IWN6 122 aa10.87□□□□□ -0.67
PRDM4-201ENST00000228437 DYNLRB2Q8TF09 96 aa10.87□□□□□ -0.67
PRDM4-201ENST00000228437 FASNP49327 2511 aaKnown RBP10.87□□□□□ -0.67
PRDM4-201ENST00000228437 JMJD1CQ15652 2540 aa10.87□□□□□ -0.67
PRDM4-201ENST00000228437 A0A0B4J2C4 111 aa10.87□□□□□ -0.67
PRDM4-201ENST00000228437 COX8CQ7Z4L0 72 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms