RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 C15orf53Q8NAA6 179 aa18.97■□□□□ 0.63
CHMP4B-201ENST00000217402 MRAP2Q96G30 205 aa18.97■□□□□ 0.63
CHMP4B-201ENST00000217402 TRBV10-1A0A0K0K1A3 114 aa18.96■□□□□ 0.63
CHMP4B-201ENST00000217402 NEXN-AS1Q8NBZ9 246 aa18.96■□□□□ 0.63
CHMP4B-201ENST00000217402 GNB1LQ9BYB4 327 aa18.96■□□□□ 0.63
CHMP4B-201ENST00000217402 ZNRF2Q8NHG8 242 aa18.96■□□□□ 0.63
CHMP4B-201ENST00000217402 RPL39LQ96EH5 51 aaKnown RBP18.96■□□□□ 0.63
CHMP4B-201ENST00000217402 HLA-DQA1P01909 254 aa18.95■□□□□ 0.62
CHMP4B-201ENST00000217402 SRIP30626 198 aa18.95■□□□□ 0.62
CHMP4B-201ENST00000217402 MRPL23Q16540 153 aaKnown RBP18.95■□□□□ 0.62
CHMP4B-201ENST00000217402 APLNQ9ULZ1 77 aa18.95■□□□□ 0.62
CHMP4B-201ENST00000217402 RPL36AP83881 106 aaKnown RBP18.94■□□□□ 0.62
CHMP4B-201ENST00000217402 COX19Q49B96 90 aa18.94■□□□□ 0.62
CHMP4B-201ENST00000217402 RPL36ALQ969Q0 106 aaKnown RBP18.94■□□□□ 0.62
CHMP4B-201ENST00000217402 DYNC2H1Q8NCM8 4307 aaKnown RBP18.94■□□□□ 0.62
CHMP4B-201ENST00000217402 D6R8Y8 96 aa18.93■□□□□ 0.62
CHMP4B-201ENST00000217402 CKS2P33552 79 aa18.93■□□□□ 0.62
CHMP4B-201ENST00000217402 RPS10P46783 165 aaKnown RBP18.93■□□□□ 0.62
CHMP4B-201ENST00000217402 FRZBQ92765 325 aa18.92■□□□□ 0.62
CHMP4B-201ENST00000217402 NIT2Q9NQR4 276 aa18.92■□□□□ 0.62
CHMP4B-201ENST00000217402 TNFRSF18Q9Y5U5 241 aa18.92■□□□□ 0.62
CHMP4B-201ENST00000217402 TRBV7-3A0A075B6L6 115 aa18.92■□□□□ 0.62
CHMP4B-201ENST00000217402 APCSP02743 223 aa18.92■□□□□ 0.62
CHMP4B-201ENST00000217402 OR10J3Q5JRS4 329 aa18.92■□□□□ 0.62
CHMP4B-201ENST00000217402 MT-ND6P03923 174 aa18.91■□□□□ 0.62
CHMP4B-201ENST00000217402 LINC00694P0DN24 101 aa18.91■□□□□ 0.62
CHMP4B-201ENST00000217402 MRPL18Q9H0U6 180 aaKnown RBP18.91■□□□□ 0.62
CHMP4B-201ENST00000217402 TCTAP57738 103 aa18.89■□□□□ 0.62
CHMP4B-201ENST00000217402 KIAA1644Q3SXP7 199 aa18.89■□□□□ 0.62
CHMP4B-201ENST00000217402 NEGR1Q7Z3B1 354 aa18.89■□□□□ 0.62
CHMP4B-201ENST00000217402 DNAJC30Q96LL9 226 aa18.89■□□□□ 0.62
CHMP4B-201ENST00000217402 TENM2Q9NT68 2774 aa18.89■□□□□ 0.61
CHMP4B-201ENST00000217402 COLCA2A8K830 154 aa18.89■□□□□ 0.61
CHMP4B-201ENST00000217402 UBE2D3P61077 147 aa18.89■□□□□ 0.61
CHMP4B-201ENST00000217402 UBE2D2P62837 147 aa18.89■□□□□ 0.61
CHMP4B-201ENST00000217402 ORMDL3Q8N138 153 aa18.89■□□□□ 0.61
CHMP4B-201ENST00000217402 NRACQ8N912 160 aa18.89■□□□□ 0.61
CHMP4B-201ENST00000217402 TRAPPC1Q9Y5R8 145 aa18.89■□□□□ 0.61
CHMP4B-201ENST00000217402 ATP6V0E2Q8NHE4 81 aa18.88■□□□□ 0.61
CHMP4B-201ENST00000217402 IGHV3-38A0A0C4DH36 116 aa18.87■□□□□ 0.61
CHMP4B-201ENST00000217402 PPBPP02775 128 aa18.87■□□□□ 0.61
CHMP4B-201ENST00000217402 FABP9Q0Z7S8 132 aa18.87■□□□□ 0.61
CHMP4B-201ENST00000217402 PRELID3AQ96N28 172 aa18.86■□□□□ 0.61
CHMP4B-201ENST00000217402 SH2D6Q7Z4S9 175 aa18.85■□□□□ 0.61
CHMP4B-201ENST00000217402 TNFRSF6BO95407 300 aa18.85■□□□□ 0.61
CHMP4B-201ENST00000217402 NPYP01303 97 aa18.85■□□□□ 0.61
CHMP4B-201ENST00000217402 ST20Q9HBF5 79 aa18.85■□□□□ 0.61
CHMP4B-201ENST00000217402 PPP1R17O96001 155 aa18.84■□□□□ 0.61
CHMP4B-201ENST00000217402 TRBV6-5A0A0K0K1A5 114 aa18.83■□□□□ 0.61
CHMP4B-201ENST00000217402 SDHAF1A6NFY7 115 aa18.83■□□□□ 0.61
CHMP4B-201ENST00000217402 RAB5AP20339 215 aa18.83■□□□□ 0.61
CHMP4B-201ENST00000217402 PLECQ15149 4684 aaKnown RBP18.83■□□□□ 0.61
CHMP4B-201ENST00000217402 ESRGQ1W209 222 aa18.82■□□□□ 0.6
CHMP4B-201ENST00000217402 DEFB104AQ8WTQ1 72 aa18.82■□□□□ 0.6
CHMP4B-201ENST00000217402 LYPD5Q6UWN5 251 aa18.82■□□□□ 0.6
CHMP4B-201ENST00000217402 SUMO2P61956 95 aaKnown RBP18.81■□□□□ 0.6
CHMP4B-201ENST00000217402 DAZ4Q86SG3 579 aaKnown RBP18.81■□□□□ 0.6
CHMP4B-201ENST00000217402 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.81■□□□□ 0.6
CHMP4B-201ENST00000217402 TMEM70Q9BUB7 260 aa18.81■□□□□ 0.6
CHMP4B-201ENST00000217402 GTSF1LQ9H1H1 148 aa18.81■□□□□ 0.6
CHMP4B-201ENST00000217402 DAZ3Q9NR90 486 aaKnown RBP18.81■□□□□ 0.6
CHMP4B-201ENST00000217402 CCL18P55774 89 aa18.78■□□□□ 0.6
CHMP4B-201ENST00000217402 C20orf78Q9BR46 151 aa18.78■□□□□ 0.6
CHMP4B-201ENST00000217402 LAMTOR2Q9Y2Q5 125 aa18.78■□□□□ 0.6
CHMP4B-201ENST00000217402 PHOX2AO14813 284 aa18.78■□□□□ 0.6
CHMP4B-201ENST00000217402 UBE2DNLQ8IWF7 75 aa18.78■□□□□ 0.6
CHMP4B-201ENST00000217402 ALKBH7Q9BT30 221 aaPredicted RBP18.78■□□□□ 0.6
CHMP4B-201ENST00000217402 LINC00588Q9Y4M8 146 aa18.78■□□□□ 0.6
CHMP4B-201ENST00000217402 TRGC2P03986 189 aa18.76■□□□□ 0.59
CHMP4B-201ENST00000217402 POLR2KP53803 58 aaKnown RBP18.76■□□□□ 0.59
CHMP4B-201ENST00000217402 LOC389332A0A1B0GUA5 103 aa18.75■□□□□ 0.59
CHMP4B-201ENST00000217402 PMCHP20382 165 aa18.75■□□□□ 0.59
CHMP4B-201ENST00000217402 I3L3M4 83 aa18.74■□□□□ 0.59
CHMP4B-201ENST00000217402 SMIM2Q9BVW6 85 aa18.74■□□□□ 0.59
CHMP4B-201ENST00000217402 MAP1LC3AQ9H492 121 aa18.74■□□□□ 0.59
CHMP4B-201ENST00000217402 TRBV27A0A0K0K1C4 114 aa18.74■□□□□ 0.59
CHMP4B-201ENST00000217402 LYSTQ99698 3801 aa18.73■□□□□ 0.59
CHMP4B-201ENST00000217402 VCYO14598 125 aa18.73■□□□□ 0.59
CHMP4B-201ENST00000217402 TIRAPP58753 221 aa18.73■□□□□ 0.59
CHMP4B-201ENST00000217402 COTL1Q14019 142 aa18.73■□□□□ 0.59
CHMP4B-201ENST00000217402 NTM-AS1Q6ZSK4 140 aa18.73■□□□□ 0.59
CHMP4B-201ENST00000217402 TRBV6-8A0A0A6YYG3 113 aa18.71■□□□□ 0.59
CHMP4B-201ENST00000217402 LELP1Q5T871 98 aa18.71■□□□□ 0.59
CHMP4B-201ENST00000217402 MRPS16Q9Y3D3 137 aaKnown RBP18.71■□□□□ 0.59
CHMP4B-201ENST00000217402 TSHBP01222 138 aa18.7■□□□□ 0.58
CHMP4B-201ENST00000217402 RPL32P62910 135 aaKnown RBP18.7■□□□□ 0.58
CHMP4B-201ENST00000217402 TMEM97Q5BJF2 176 aa18.69■□□□□ 0.58
CHMP4B-201ENST00000217402 KIR2DL4Q99706 377 aa18.69■□□□□ 0.58
CHMP4B-201ENST00000217402 FCER1GP30273 86 aa18.68■□□□□ 0.58
CHMP4B-201ENST00000217402 IQCJQ1A5X6 159 aa18.68■□□□□ 0.58
CHMP4B-201ENST00000217402 LGALS9CQ6DKI2 356 aa18.68■□□□□ 0.58
CHMP4B-201ENST00000217402 LINC00476Q8WZB0 136 aa18.68■□□□□ 0.58
CHMP4B-201ENST00000217402 TRBV25-1A0A075B6N4 114 aa18.67■□□□□ 0.58
CHMP4B-201ENST00000217402 IGHV1-24A0A0C4DH33 117 aa18.67■□□□□ 0.58
CHMP4B-201ENST00000217402 PRSS47A8MTI9 375 aa18.67■□□□□ 0.58
CHMP4B-201ENST00000217402 LY6G6CO95867 125 aa18.67■□□□□ 0.58
CHMP4B-201ENST00000217402 AMTP48728 403 aa18.67■□□□□ 0.58
CHMP4B-201ENST00000217402 WFDC10BQ8IUB3 73 aa18.67■□□□□ 0.58
CHMP4B-201ENST00000217402 TRAV8-6A0A0B4J262 113 aa18.67■□□□□ 0.58
CHMP4B-201ENST00000217402 IGLV2-18A0A075B6J9 118 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms