RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 TMEM141Q96I45 108 aa13.22□□□□□ -0.29
SLC22A4-201ENST00000200652 TIMM17AQ99595 171 aa13.22□□□□□ -0.29
SLC22A4-201ENST00000200652 H3BRM9 83 aa13.21□□□□□ -0.29
SLC22A4-201ENST00000200652 RNASE1P07998 156 aaKnown RBP13.21□□□□□ -0.29
SLC22A4-201ENST00000200652 ODF3L2Q3SX64 289 aa13.21□□□□□ -0.29
SLC22A4-201ENST00000200652 M0R2P5 195 aa13.21□□□□□ -0.29
SLC22A4-201ENST00000200652 AMMECR1LQ6DCA0 310 aa13.21□□□□□ -0.29
SLC22A4-201ENST00000200652 LINC01587Q99440 93 aa13.21□□□□□ -0.29
SLC22A4-201ENST00000200652 C16orf95Q9H693 158 aa13.21□□□□□ -0.29
SLC22A4-201ENST00000200652 ZNF415Q09FC8 603 aa13.2□□□□□ -0.3
SLC22A4-201ENST00000200652 PMVKQ15126 192 aa13.2□□□□□ -0.3
SLC22A4-201ENST00000200652 RHOHQ15669 191 aa13.2□□□□□ -0.3
SLC22A4-201ENST00000200652 NSUN5P1Q3KNT7 163 aa13.2□□□□□ -0.3
SLC22A4-201ENST00000200652 LINC00467Q9BRT7 94 aa13.2□□□□□ -0.3
SLC22A4-201ENST00000200652 KMT2BQ9UMN6 2715 aaPredicted RBP13.2□□□□□ -0.3
SLC22A4-201ENST00000200652 ANK3Q12955 4377 aaKnown RBP13.2□□□□□ -0.3
SLC22A4-201ENST00000200652 IGHV3-73A0A0B4J1V6 119 aa13.2□□□□□ -0.3
SLC22A4-201ENST00000200652 EDA2RQ9HAV5 297 aa13.2□□□□□ -0.3
SLC22A4-201ENST00000200652 TSSC4Q9Y5U2 329 aaPredicted RBP13.2□□□□□ -0.3
SLC22A4-201ENST00000200652 IGLV4-69A0A075B6H9 119 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 OR11H12B2RN74 326 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 I3L3M4 83 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 P0DMU3 169 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 FAM231AP0DMU4 169 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 FAM231CP0DMU5 169 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 GCSHP23434 173 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 PROK1P58294 105 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 UFSP1Q6NVU6 142 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 OR11H2Q8NH07 326 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 CLUHP3Q96NS8 147 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 CST9LQ9H4G1 147 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 E9PLD3 99 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 INSP01308 110 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 FXYD2P54710 66 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 PIK3CD-AS1Q5SR53 167 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 C11orf72Q8NBR9 251 aa13.19□□□□□ -0.3
SLC22A4-201ENST00000200652 A8MWV9 139 aa13.18□□□□□ -0.3
SLC22A4-201ENST00000200652 K7EP13 123 aa13.18□□□□□ -0.3
SLC22A4-201ENST00000200652 PTH2Q96A98 100 aa13.18□□□□□ -0.3
SLC22A4-201ENST00000200652 NACAE9PAV3 2078 aa13.18□□□□□ -0.3
SLC22A4-201ENST00000200652 C9orf118A6NHY6 69 aa13.17□□□□□ -0.3
SLC22A4-201ENST00000200652 C11orf86A6NJI1 115 aa13.17□□□□□ -0.3
SLC22A4-201ENST00000200652 NF1P21359 2839 aa13.17□□□□□ -0.3
SLC22A4-201ENST00000200652 WNK1Q9H4A3 2382 aa13.16□□□□□ -0.3
SLC22A4-201ENST00000200652 ACANP16112 2415 aa13.16□□□□□ -0.3
SLC22A4-201ENST00000200652 MYMXA0A1B0GTQ4 84 aa13.16□□□□□ -0.3
SLC22A4-201ENST00000200652 EMP1P54849 157 aa13.16□□□□□ -0.3
SLC22A4-201ENST00000200652 CEND1Q8N111 149 aa13.16□□□□□ -0.3
SLC22A4-201ENST00000200652 C20orf203Q8NBC4 194 aa13.16□□□□□ -0.3
SLC22A4-201ENST00000200652 OR4C5Q8NGB2 326 aa13.16□□□□□ -0.3
SLC22A4-201ENST00000200652 PRADC1Q9BSG0 188 aa13.16□□□□□ -0.3
SLC22A4-201ENST00000200652 TM2D2Q9BX73 214 aa13.16□□□□□ -0.3
SLC22A4-201ENST00000200652 XCL2Q9UBD3 114 aa13.16□□□□□ -0.3
SLC22A4-201ENST00000200652 PAPPA-AS1Q5QFB9 102 aa13.16□□□□□ -0.3
SLC22A4-201ENST00000200652 STHQ8IWL8 128 aa13.16□□□□□ -0.3
SLC22A4-201ENST00000200652 RAB37Q96AX2 223 aa13.16□□□□□ -0.3
SLC22A4-201ENST00000200652 CFAP126Q5VTH2 177 aa13.15□□□□□ -0.3
SLC22A4-201ENST00000200652 OPRPNQ99935 248 aaPredicted RBP13.15□□□□□ -0.31
SLC22A4-201ENST00000200652 SPXQ9BT56 116 aa13.15□□□□□ -0.31
SLC22A4-201ENST00000200652 ITPR2Q14571 2701 aa13.14□□□□□ -0.31
SLC22A4-201ENST00000200652 H3BUT2 72 aa13.14□□□□□ -0.31
SLC22A4-201ENST00000200652 SCGB2A2Q13296 93 aa13.14□□□□□ -0.31
SLC22A4-201ENST00000200652 TAL2Q16559 108 aa13.14□□□□□ -0.31
SLC22A4-201ENST00000200652 Q6ZSN1 163 aa13.14□□□□□ -0.31
SLC22A4-201ENST00000200652 SMIM13P0DJ93 91 aa13.13□□□□□ -0.31
SLC22A4-201ENST00000200652 AZU1P20160 251 aa13.13□□□□□ -0.31
SLC22A4-201ENST00000200652 HILS1P60008 231 aa13.13□□□□□ -0.31
SLC22A4-201ENST00000200652 BEAN1Q3B7T3 259 aa13.13□□□□□ -0.31
SLC22A4-201ENST00000200652 C1orf158Q8N1D5 194 aa13.13□□□□□ -0.31
SLC22A4-201ENST00000200652 ZNF418Q8TF45 676 aaPredicted RBP13.13□□□□□ -0.31
SLC22A4-201ENST00000200652 NAA38Q9BRA0 125 aaKnown RBP13.13□□□□□ -0.31
SLC22A4-201ENST00000200652 MRPL16Q9NX20 251 aaKnown RBP13.13□□□□□ -0.31
SLC22A4-201ENST00000200652 Q9UF83 564 aa13.13□□□□□ -0.31
SLC22A4-201ENST00000200652 ZNRF2Q8NHG8 242 aa13.12□□□□□ -0.31
SLC22A4-201ENST00000200652 TNFRSF18Q9Y5U5 241 aa13.12□□□□□ -0.31
SLC22A4-201ENST00000200652 HELZ2Q9BYK8 2649 aaKnown RBP13.11□□□□□ -0.31
SLC22A4-201ENST00000200652 HIST1H4GQ99525 98 aa13.11□□□□□ -0.31
SLC22A4-201ENST00000200652 TRBV7-3A0A075B6L6 115 aa13.11□□□□□ -0.31
SLC22A4-201ENST00000200652 ZNF815PA8K554 130 aa13.1□□□□□ -0.31
SLC22A4-201ENST00000200652 RHODO00212 210 aa13.1□□□□□ -0.31
SLC22A4-201ENST00000200652 RS1O15537 224 aa13.1□□□□□ -0.31
SLC22A4-201ENST00000200652 SAP30O75446 220 aa13.1□□□□□ -0.31
SLC22A4-201ENST00000200652 HERVK_113P61574 105 aa13.1□□□□□ -0.31
SLC22A4-201ENST00000200652 SMR3AQ99954 134 aa13.1□□□□□ -0.31
SLC22A4-201ENST00000200652 IGHV3OR16-12A0A075B7B8 117 aa13.09□□□□□ -0.31
SLC22A4-201ENST00000200652 K7ERJ3 54 aa13.09□□□□□ -0.31
SLC22A4-201ENST00000200652 TMEM170BQ5T4T1 132 aa13.09□□□□□ -0.31
SLC22A4-201ENST00000200652 PHLDA1Q8WV24 401 aaPredicted RBP13.09□□□□□ -0.31
SLC22A4-201ENST00000200652 NHP2Q9NX24 153 aaKnown RBP13.09□□□□□ -0.31
SLC22A4-201ENST00000200652 IGLV4-3A0A075B6K6 122 aa13.09□□□□□ -0.31
SLC22A4-201ENST00000200652 GAGE10A6NGK3 116 aa13.09□□□□□ -0.31
SLC22A4-201ENST00000200652 ADARB2-AS1A8MUL3 147 aa13.09□□□□□ -0.31
SLC22A4-201ENST00000200652 IGHV3-53P01767 116 aa13.09□□□□□ -0.31
SLC22A4-201ENST00000200652 NFE4Q86UQ8 179 aa13.09□□□□□ -0.31
SLC22A4-201ENST00000200652 NDUFA7O95182 113 aa13.08□□□□□ -0.32
SLC22A4-201ENST00000200652 PLEKHB2Q96CS7 222 aa13.08□□□□□ -0.32
SLC22A4-201ENST00000200652 UNC79Q9P2D8 2635 aa13.07□□□□□ -0.32
SLC22A4-201ENST00000200652 A0A1W2PPM0 123 aa13.07□□□□□ -0.32
SLC22A4-201ENST00000200652 IL17DQ8TAD2 202 aa13.07□□□□□ -0.32
SLC22A4-201ENST00000200652 PYGO1Q9Y3Y4 419 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms