RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 DUX5Q96PT3 197 aa14.99□□□□□ -0.01
RCN1-201ENST00000054950 IGHV3-73A0A0B4J1V6 119 aa14.99□□□□□ -0.01
RCN1-201ENST00000054950 TRBV6-5A0A0K0K1A5 114 aa14.99□□□□□ -0.01
RCN1-201ENST00000054950 A0A1B0GV72 72 aa14.99□□□□□ -0.01
RCN1-201ENST00000054950 ADARB2-AS1A8MUL3 147 aa14.99□□□□□ -0.01
RCN1-201ENST00000054950 GNLYP22749 145 aa14.99□□□□□ -0.01
RCN1-201ENST00000054950 CFHR3Q02985 330 aa14.99□□□□□ -0.01
RCN1-201ENST00000054950 TRPT1Q86TN4 253 aaKnown RBP14.99□□□□□ -0.01
RCN1-201ENST00000054950 UTP20O75691 2785 aaKnown RBP14.99□□□□□ -0.01
RCN1-201ENST00000054950 TEN1Q86WV5 123 aa14.98□□□□□ -0.01
RCN1-201ENST00000054950 ANKRD29Q8N6D5 301 aa14.98□□□□□ -0.01
RCN1-201ENST00000054950 TMEM223A0PJW6 202 aa14.98□□□□□ -0.01
RCN1-201ENST00000054950 SPINK8P0C7L1 97 aa14.98□□□□□ -0.01
RCN1-201ENST00000054950 HTN1P15515 57 aa14.98□□□□□ -0.01
RCN1-201ENST00000054950 ZNF22P17026 224 aaPredicted RBP14.98□□□□□ -0.01
RCN1-201ENST00000054950 CUBNO60494 3623 aa14.97□□□□□ -0.01
RCN1-201ENST00000054950 A0A0J9YX75 114 aa14.97□□□□□ -0.01
RCN1-201ENST00000054950 BRI3O95415 125 aa14.97□□□□□ -0.01
RCN1-201ENST00000054950 PRM2P04554 102 aa14.97□□□□□ -0.01
RCN1-201ENST00000054950 PPDPFLQ8WWR9 84 aa14.97□□□□□ -0.01
RCN1-201ENST00000054950 CREBBPQ92793 2442 aa14.96□□□□□ -0.01
RCN1-201ENST00000054950 ZANQ9Y493 2812 aa14.96□□□□□ -0.01
RCN1-201ENST00000054950 RNASE13Q5GAN3 156 aaKnown RBP14.96□□□□□ -0.01
RCN1-201ENST00000054950 MUSTN1Q8IVN3 82 aa14.96□□□□□ -0.01
RCN1-201ENST00000054950 C10orf105Q8TEF2 133 aa14.96□□□□□ -0.01
RCN1-201ENST00000054950 ELANEP08246 267 aa14.96□□□□□ -0.01
RCN1-201ENST00000054950 PROK1P58294 105 aa14.96□□□□□ -0.01
RCN1-201ENST00000054950 CEMP1Q6PRD7 247 aaPredicted RBP14.96□□□□□ -0.01
RCN1-201ENST00000054950 Q6ZUT4 128 aa14.96□□□□□ -0.01
RCN1-201ENST00000054950 A8MWV9 139 aa14.95□□□□□ -0.02
RCN1-201ENST00000054950 NSUN5P1Q3KNT7 163 aa14.95□□□□□ -0.02
RCN1-201ENST00000054950 LYRM7Q5U5X0 104 aa14.95□□□□□ -0.02
RCN1-201ENST00000054950 IGHV1OR15-1A0A075B7D0 117 aa14.95□□□□□ -0.02
RCN1-201ENST00000054950 K7EMT4 169 aa14.95□□□□□ -0.02
RCN1-201ENST00000054950 C20orf203Q8NBC4 194 aa14.95□□□□□ -0.02
RCN1-201ENST00000054950 IGLV4-3A0A075B6K6 122 aa14.94□□□□□ -0.02
RCN1-201ENST00000054950 RHODO00212 210 aa14.94□□□□□ -0.02
RCN1-201ENST00000054950 LEPROTO15243 131 aa14.94□□□□□ -0.02
RCN1-201ENST00000054950 CCL19Q99731 98 aa14.94□□□□□ -0.02
RCN1-201ENST00000054950 CRYBA4P53673 196 aa14.94□□□□□ -0.02
RCN1-201ENST00000054950 C9JAW5 83 aa14.93□□□□□ -0.02
RCN1-201ENST00000054950 IGHV3-33P01772 117 aa14.93□□□□□ -0.02
RCN1-201ENST00000054950 IGHV4-59P01825 116 aa14.93□□□□□ -0.02
RCN1-201ENST00000054950 TMEM263Q8WUH6 116 aaKnown RBP14.93□□□□□ -0.02
RCN1-201ENST00000054950 Q9UF83 564 aa14.93□□□□□ -0.02
RCN1-201ENST00000054950 TRBV20-1A0A075B6N2 111 aa14.93□□□□□ -0.02
RCN1-201ENST00000054950 PSMB8P28062 276 aa14.93□□□□□ -0.02
RCN1-201ENST00000054950 SYNJ2BPP57105 145 aa14.93□□□□□ -0.02
RCN1-201ENST00000054950 SPXQ9BT56 116 aa14.93□□□□□ -0.02
RCN1-201ENST00000054950 TCTEX1D4Q5JR98 221 aa14.92□□□□□ -0.02
RCN1-201ENST00000054950 SBSPONQ8IVN8 264 aa14.92□□□□□ -0.02
RCN1-201ENST00000054950 RBMY1A1P0DJD3 496 aaKnown RBP14.92□□□□□ -0.02
RCN1-201ENST00000054950 RBMY1CP0DJD4 496 aa14.92□□□□□ -0.02
RCN1-201ENST00000054950 ATP5J2P56134 94 aa14.92□□□□□ -0.02
RCN1-201ENST00000054950 RBMY1FQ15415 496 aaKnown RBP14.92□□□□□ -0.02
RCN1-201ENST00000054950 RHOHQ15669 191 aa14.92□□□□□ -0.02
RCN1-201ENST00000054950 BEX4Q9NWD9 120 aaPredicted RBP14.92□□□□□ -0.02
RCN1-201ENST00000054950 TRAV8-3A0A0A6YYJ7 113 aa14.91□□□□□ -0.02
RCN1-201ENST00000054950 MSMBP08118 114 aa14.91□□□□□ -0.02
RCN1-201ENST00000054950 SNRPD3P62318 126 aaKnown RBP14.91□□□□□ -0.02
RCN1-201ENST00000054950 VCX2Q9H322 139 aa14.91□□□□□ -0.02
RCN1-201ENST00000054950 PRRC2AP48634 2157 aaKnown RBP14.91□□□□□ -0.02
RCN1-201ENST00000054950 I3L3M4 83 aa14.91□□□□□ -0.02
RCN1-201ENST00000054950 K7EQG2 157 aa14.91□□□□□ -0.02
RCN1-201ENST00000054950 FLNCQ14315 2725 aa14.91□□□□□ -0.02
RCN1-201ENST00000054950 SLC25A20O43772 301 aa14.9□□□□□ -0.02
RCN1-201ENST00000054950 Q5PR19 223 aa14.9□□□□□ -0.02
RCN1-201ENST00000054950 CLUHP3Q96NS8 147 aa14.9□□□□□ -0.02
RCN1-201ENST00000054950 KNCNA6PVL3 124 aa14.9□□□□□ -0.02
RCN1-201ENST00000054950 Q1RN00 199 aa14.9□□□□□ -0.02
RCN1-201ENST00000054950 GEMIN7Q9H840 131 aaKnown RBP14.9□□□□□ -0.02
RCN1-201ENST00000054950 A8MZ25 164 aa14.89□□□□□ -0.03
RCN1-201ENST00000054950 FAM104AQ969W3 186 aa14.89□□□□□ -0.03
RCN1-201ENST00000054950 ERG28Q9UKR5 140 aa14.89□□□□□ -0.03
RCN1-201ENST00000054950 NRGNQ92686 78 aa14.89□□□□□ -0.03
RCN1-201ENST00000054950 A0A0J9YXY3 114 aa14.88□□□□□ -0.03
RCN1-201ENST00000054950 NPC2P61916 151 aa14.88□□□□□ -0.03
RCN1-201ENST00000054950 TRAV26-1A0A087WT03 109 aa14.88□□□□□ -0.03
RCN1-201ENST00000054950 IGHV3-30-3P0DP02 117 aa14.87□□□□□ -0.03
RCN1-201ENST00000054950 CD28P10747 220 aa14.87□□□□□ -0.03
RCN1-201ENST00000054950 DEFB112Q30KQ8 113 aa14.87□□□□□ -0.03
RCN1-201ENST00000054950 CFAP46Q8IYW2 2715 aa14.87□□□□□ -0.03
RCN1-201ENST00000054950 ODF3Q96PU9 254 aa14.87□□□□□ -0.03
RCN1-201ENST00000054950 Q6ZSV7 163 aa14.86□□□□□ -0.03
RCN1-201ENST00000054950 USP9YO00507 2555 aaPredicted RBP14.86□□□□□ -0.03
RCN1-201ENST00000054950 NACAE9PAV3 2078 aa14.86□□□□□ -0.03
RCN1-201ENST00000054950 M0R2P5 195 aa14.86□□□□□ -0.03
RCN1-201ENST00000054950 A0A0B4J2C4 111 aa14.84□□□□□ -0.03
RCN1-201ENST00000054950 PRSS2P07478 247 aa14.84□□□□□ -0.03
RCN1-201ENST00000054950 ADAMTSL4-AS1Q5T5F5 129 aa14.84□□□□□ -0.03
RCN1-201ENST00000054950 MAPK1IP1LQ8NDC0 245 aa14.84□□□□□ -0.03
RCN1-201ENST00000054950 TIMM21Q9BVV7 248 aa14.84□□□□□ -0.03
RCN1-201ENST00000054950 MXRA5Q9NR99 2828 aa14.84□□□□□ -0.03
RCN1-201ENST00000054950 NTN5Q8WTR8 489 aaPredicted RBP14.83□□□□□ -0.03
RCN1-201ENST00000054950 LITAFQ99732 161 aa14.83□□□□□ -0.03
RCN1-201ENST00000054950 POLQO75417 2590 aa14.83□□□□□ -0.03
RCN1-201ENST00000054950 Q6ZSN1 163 aa14.83□□□□□ -0.04
RCN1-201ENST00000054950 TRIAP1O43715 76 aa14.82□□□□□ -0.04
RCN1-201ENST00000054950 USP9XQ93008 2570 aaPredicted RBP14.82□□□□□ -0.04
RCN1-201ENST00000054950 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 222.6 ms