RNA–Protein interactions for RNA: ENST00000005558.8

IFRD1-201, Transcript of interferon related developmental regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFRD1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-201ENST00000005558 HIST1H2BLQ99880 126 aa13.55□□□□□ -0.24
IFRD1-201ENST00000005558 DKK2Q9UBU2 259 aa13.55□□□□□ -0.24
IFRD1-201ENST00000005558 TMEM238LA0A1B0GVL6 79 aa13.55□□□□□ -0.24
IFRD1-201ENST00000005558 LINC00614P0C842 121 aa13.55□□□□□ -0.24
IFRD1-201ENST00000005558 OR4C5Q8NGB2 326 aa13.55□□□□□ -0.24
IFRD1-201ENST00000005558 C18orf15Q96N68 181 aa13.55□□□□□ -0.24
IFRD1-201ENST00000005558 TRBV6-5A0A0K0K1A5 114 aa13.53□□□□□ -0.24
IFRD1-201ENST00000005558 POLR2KP53803 58 aaKnown RBP13.53□□□□□ -0.24
IFRD1-201ENST00000005558 RNASEKQ6P5S7 137 aaKnown RBP13.53□□□□□ -0.24
IFRD1-201ENST00000005558 FAM19A2Q8N3H0 131 aa13.53□□□□□ -0.24
IFRD1-201ENST00000005558 A0A096LNJ9 63 aa13.53□□□□□ -0.24
IFRD1-201ENST00000005558 RHODO00212 210 aa13.53□□□□□ -0.24
IFRD1-201ENST00000005558 SUMO2P61956 95 aaKnown RBP13.53□□□□□ -0.24
IFRD1-201ENST00000005558 C20orf78Q9BR46 151 aa13.53□□□□□ -0.24
IFRD1-201ENST00000005558 TM2D3Q9BRN9 247 aa13.53□□□□□ -0.24
IFRD1-201ENST00000005558 MAP1LC3AQ9H492 121 aa13.53□□□□□ -0.24
IFRD1-201ENST00000005558 DEFB130BP0DP73 79 aa13.52□□□□□ -0.25
IFRD1-201ENST00000005558 DEFB130AP0DP74 79 aa13.52□□□□□ -0.25
IFRD1-201ENST00000005558 FHL2Q14192 279 aa13.52□□□□□ -0.25
IFRD1-201ENST00000005558 PMCHL1Q16048 86 aa13.52□□□□□ -0.25
IFRD1-201ENST00000005558 LYRM9A8MSI8 78 aa13.51□□□□□ -0.25
IFRD1-201ENST00000005558 Q8N8P6 123 aa13.51□□□□□ -0.25
IFRD1-201ENST00000005558 PRSS3P2Q8NHM4 247 aa13.51□□□□□ -0.25
IFRD1-201ENST00000005558 CHCHD1Q96BP2 118 aaKnown RBP13.51□□□□□ -0.25
IFRD1-201ENST00000005558 TRGV2A0A075B6R0 118 aa13.5□□□□□ -0.25
IFRD1-201ENST00000005558 DEFB121Q5J5C9 76 aa13.5□□□□□ -0.25
IFRD1-201ENST00000005558 NEGR1Q7Z3B1 354 aa13.5□□□□□ -0.25
IFRD1-201ENST00000005558 TMEM70Q9BUB7 260 aa13.5□□□□□ -0.25
IFRD1-201ENST00000005558 SMIM2Q9BVW6 85 aa13.5□□□□□ -0.25
IFRD1-201ENST00000005558 NIT2Q9NQR4 276 aa13.5□□□□□ -0.25
IFRD1-201ENST00000005558 NEXN-AS1Q8NBZ9 246 aa13.5□□□□□ -0.25
IFRD1-201ENST00000005558 IGHV1-24A0A0C4DH33 117 aa13.49□□□□□ -0.25
IFRD1-201ENST00000005558 FABP4P15090 132 aa13.49□□□□□ -0.25
IFRD1-201ENST00000005558 RPL32P62910 135 aaKnown RBP13.49□□□□□ -0.25
IFRD1-201ENST00000005558 SLC25A29Q8N8R3 303 aa13.49□□□□□ -0.25
IFRD1-201ENST00000005558 MRAPQ8TCY5 172 aa13.48□□□□□ -0.25
IFRD1-201ENST00000005558 ST20Q9HBF5 79 aa13.48□□□□□ -0.25
IFRD1-201ENST00000005558 NXT2Q9NPJ8 142 aaKnown RBP13.48□□□□□ -0.25
IFRD1-201ENST00000005558 AP5S1Q9NUS5 200 aa13.48□□□□□ -0.25
IFRD1-201ENST00000005558 SDHAF1A6NFY7 115 aa13.47□□□□□ -0.25
IFRD1-201ENST00000005558 TCAPO15273 167 aa13.47□□□□□ -0.25
IFRD1-201ENST00000005558 PPP1R17O96001 155 aa13.47□□□□□ -0.25
IFRD1-201ENST00000005558 PMCHP20382 165 aa13.47□□□□□ -0.25
IFRD1-201ENST00000005558 FA2HQ7L5A8 372 aa13.47□□□□□ -0.25
IFRD1-201ENST00000005558 DEFB104AQ8WTQ1 72 aa13.47□□□□□ -0.25
IFRD1-201ENST00000005558 TRBV27A0A0K0K1C4 114 aa13.46□□□□□ -0.25
IFRD1-201ENST00000005558 HSBP1O75506 76 aa13.46□□□□□ -0.25
IFRD1-201ENST00000005558 PACRGQ96M98 296 aaPredicted RBP13.46□□□□□ -0.25
IFRD1-201ENST00000005558 PRKDCP78527 4128 aaKnown RBP13.46□□□□□ -0.25
IFRD1-201ENST00000005558 AMTP48728 403 aa13.46□□□□□ -0.26
IFRD1-201ENST00000005558 LINC00173Q6ZV60 143 aa13.46□□□□□ -0.26
IFRD1-201ENST00000005558 C11orf68Q9H3H3 251 aaKnown RBP13.46□□□□□ -0.26
IFRD1-201ENST00000005558 LOC100131303A0A0U1RQF7 123 aa13.45□□□□□ -0.26
IFRD1-201ENST00000005558 COL7A1Q02388 2944 aa13.45□□□□□ -0.26
IFRD1-201ENST00000005558 H7C1H1 209 aa13.44□□□□□ -0.26
IFRD1-201ENST00000005558 K7EQD1 137 aa13.44□□□□□ -0.26
IFRD1-201ENST00000005558 CIDEAO60543 219 aa13.44□□□□□ -0.26
IFRD1-201ENST00000005558 SPART-AS1P0CW21 52 aa13.44□□□□□ -0.26
IFRD1-201ENST00000005558 S100A2P29034 98 aa13.44□□□□□ -0.26
IFRD1-201ENST00000005558 C12orf74Q32Q52 190 aa13.44□□□□□ -0.26
IFRD1-201ENST00000005558 TMEM18Q96B42 140 aa13.44□□□□□ -0.26
IFRD1-201ENST00000005558 OR10D4PQ8NGN7 298 aa13.43□□□□□ -0.26
IFRD1-201ENST00000005558 SPATA25Q9BR10 227 aa13.43□□□□□ -0.26
IFRD1-201ENST00000005558 A0A0J9YWU9 116 aa13.43□□□□□ -0.26
IFRD1-201ENST00000005558 TRBV6-4A0A1B0GX49 114 aa13.43□□□□□ -0.26
IFRD1-201ENST00000005558 VCYO14598 125 aa13.42□□□□□ -0.26
IFRD1-201ENST00000005558 TSHBP01222 138 aa13.42□□□□□ -0.26
IFRD1-201ENST00000005558 DAD1P61803 113 aa13.42□□□□□ -0.26
IFRD1-201ENST00000005558 TRGV4A0A0C4DH28 118 aa13.41□□□□□ -0.26
IFRD1-201ENST00000005558 LINC00694P0DN24 101 aa13.41□□□□□ -0.26
IFRD1-201ENST00000005558 DNAJC30Q96LL9 226 aa13.41□□□□□ -0.26
IFRD1-201ENST00000005558 MEGF8Q7Z7M0 2845 aa13.41□□□□□ -0.26
IFRD1-201ENST00000005558 TRBV10-1A0A0K0K1A3 114 aa13.41□□□□□ -0.26
IFRD1-201ENST00000005558 CRYBA4P53673 196 aa13.41□□□□□ -0.26
IFRD1-201ENST00000005558 LAGE3Q14657 143 aa13.41□□□□□ -0.26
IFRD1-201ENST00000005558 FCER1GP30273 86 aa13.4□□□□□ -0.26
IFRD1-201ENST00000005558 ZNRF2Q8NHG8 242 aa13.4□□□□□ -0.26
IFRD1-201ENST00000005558 VSIG2Q96IQ7 327 aa13.4□□□□□ -0.26
IFRD1-201ENST00000005558 HHLA3Q9XRX5 114 aa13.4□□□□□ -0.26
IFRD1-201ENST00000005558 TNFRSF18Q9Y5U5 241 aa13.4□□□□□ -0.26
IFRD1-201ENST00000005558 UBE2D3P61077 147 aa13.39□□□□□ -0.27
IFRD1-201ENST00000005558 UBE2D2P62837 147 aa13.39□□□□□ -0.27
IFRD1-201ENST00000005558 TRBV7-3A0A075B6L6 115 aa13.39□□□□□ -0.27
IFRD1-201ENST00000005558 I3L3M4 83 aa13.39□□□□□ -0.27
IFRD1-201ENST00000005558 AKR1D1P51857 326 aa13.39□□□□□ -0.27
IFRD1-201ENST00000005558 IGHV3-38A0A0C4DH36 116 aa13.38□□□□□ -0.27
IFRD1-201ENST00000005558 GAGE12JA6NER3 117 aa13.38□□□□□ -0.27
IFRD1-201ENST00000005558 GAGE1Q13065 139 aa13.38□□□□□ -0.27
IFRD1-201ENST00000005558 GAGE4Q13068 117 aa13.38□□□□□ -0.27
IFRD1-201ENST00000005558 GAGE5Q13069 117 aa13.38□□□□□ -0.27
IFRD1-201ENST00000005558 GAGE13Q4V321 117 aa13.38□□□□□ -0.27
IFRD1-201ENST00000005558 B9D2Q9BPU9 175 aa13.38□□□□□ -0.27
IFRD1-201ENST00000005558 K7EMI3 77 aa13.37□□□□□ -0.27
IFRD1-201ENST00000005558 HBDP02042 147 aa13.37□□□□□ -0.27
IFRD1-201ENST00000005558 SPATA12Q7Z6I5 190 aa13.37□□□□□ -0.27
IFRD1-201ENST00000005558 Q8N976 141 aa13.37□□□□□ -0.27
IFRD1-201ENST00000005558 PHLDA1Q8WV24 401 aaPredicted RBP13.37□□□□□ -0.27
IFRD1-201ENST00000005558 ATP5G1P05496 136 aa13.36□□□□□ -0.27
IFRD1-201ENST00000005558 C3orf79P0CE67 100 aa13.36□□□□□ -0.27
IFRD1-201ENST00000005558 RHOHQ15669 191 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms