RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 GAGE2AQ6NT46 116 aa3.19□□□□□ -1.9
CFTR-201ENST00000003084 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.19□□□□□ -1.9
CFTR-201ENST00000003084 DEFB131BA0A096LNP1 70 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 A0A1B0GV72 72 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 ZDBF2Q9HCK1 2354 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 H0YGX0 51 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 C5orf38Q86SI9 138 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 GTSF1Q8WW33 167 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 SIGMAR1Q99720 223 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 DKK2Q9UBU2 259 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 COL4A2P08572 1712 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 C9JAW5 83 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 HIST2H2BDQ6DRA6 164 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 C20orf173Q96LM9 149 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 ORMDL1Q9P0S3 153 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 HEATR5AQ86XA9 2040 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 TRBV6-4A0A1B0GX49 114 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 SEC61BP60468 96 aaKnown RBP3.18□□□□□ -1.9
CFTR-201ENST00000003084 PYY3Q5JQD4 70 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 BAALCQ8WXS3 180 aa3.18□□□□□ -1.9
CFTR-201ENST00000003084 KMT2EQ8IZD2 1858 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 DEFB4AO15263 64 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 PROP1O75360 226 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 GATA1P15976 413 aaPredicted RBP3.17□□□□□ -1.9
CFTR-201ENST00000003084 CRYBA4P53673 196 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 FAM222AQ5U5X8 452 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 Q6ZPA2 131 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 TP53BP1Q12888 1972 aaPredicted RBP3.17□□□□□ -1.9
CFTR-201ENST00000003084 TINCRA0A1B0GVN0 87 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 HIST1H4AP62805 103 aaKnown RBP3.17□□□□□ -1.9
CFTR-201ENST00000003084 SPAG11BQ08648 103 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 UBL5Q9BZL1 73 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 CRYGDP07320 174 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 IGLC3P0DOY3 106 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 COA6Q5JTJ3 125 aaKnown RBP3.17□□□□□ -1.9
CFTR-201ENST00000003084 C20orf203Q8NBC4 194 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 B9D2Q9BPU9 175 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 CDH23Q9H251 3354 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 TRAV26-1A0A087WT03 109 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 F8W1H4 67 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 GAGE2BQ13066 116 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 CDSNQ15517 529 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 ZFAND6Q6FIF0 208 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 PHF3Q92576 2039 aaKnown RBP3.17□□□□□ -1.9
CFTR-201ENST00000003084 IGLV10-54A0A075B6I4 117 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 KLK12Q9UKR0 248 aa3.17□□□□□ -1.9
CFTR-201ENST00000003084 IGLC6P0CF74 106 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 IGHV4-28A0A0C4DH34 117 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 CFC1BP0CG36 223 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 CFC1P0CG37 223 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 PIK3CD-AS1Q5SR53 167 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 ZFAND2AQ8N6M9 145 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 IGHV1-58A0A0C4DH39 117 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 H0Y9J4 135 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 REG3AQ06141 175 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 KRTAP19-4Q3LI73 84 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 CFAP126Q5VTH2 177 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 UFSP1Q6NVU6 142 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 Q6ZTI0 123 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 SND1-IT1Q9HBX3 110 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 YLPM1P49750 1951 aaKnown RBP3.16□□□□□ -1.9
CFTR-201ENST00000003084 DOCK9Q9BZ29 2069 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 K7EP34 96 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 P0DMU3 169 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 FAM231AP0DMU4 169 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 FAM231CP0DMU5 169 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 TP53TG3Q9ULZ0 132 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 A0A0J9YXV3 536 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 NUPR2A6NF83 97 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 XP32Q5T750 250 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 PPDPFLQ8WWR9 84 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 CARD19Q96LW7 228 aa3.16□□□□□ -1.9
CFTR-201ENST00000003084 CNTRLQ7Z7A1 2325 aa3.15□□□□□ -1.9
CFTR-201ENST00000003084 C12orf74Q32Q52 190 aa3.15□□□□□ -1.9
CFTR-201ENST00000003084 HIGD1BQ9P298 99 aa3.15□□□□□ -1.9
CFTR-201ENST00000003084 NDUFC2-KCTD14E9PQ53 114 aa3.15□□□□□ -1.9
CFTR-201ENST00000003084 FUSP35637 526 aaKnown RBP eCLIP3.15□□□□□ -1.9
CFTR-201ENST00000003084 ZNF295-AS1Q8N0V1 137 aa3.15□□□□□ -1.9
CFTR-201ENST00000003084 LINC00482Q8N8I6 264 aa3.15□□□□□ -1.9
CFTR-201ENST00000003084 NEXN-AS1Q8NBZ9 246 aa3.15□□□□□ -1.9
CFTR-201ENST00000003084 A0A1B0GXF2 115 aa3.15□□□□□ -1.91
CFTR-201ENST00000003084 KRTAP10-9P60411 292 aa3.15□□□□□ -1.91
CFTR-201ENST00000003084 SPEGQ15772 3267 aa3.15□□□□□ -1.91
CFTR-201ENST00000003084 AHCTF1Q8WYP5 2266 aa3.15□□□□□ -1.91
CFTR-201ENST00000003084 ZNF80P51504 273 aaPredicted RBP3.15□□□□□ -1.91
CFTR-201ENST00000003084 MRGPRG-AS1Q2M3A8 158 aa3.15□□□□□ -1.91
CFTR-201ENST00000003084 OPRPNQ99935 248 aaPredicted RBP3.15□□□□□ -1.91
CFTR-201ENST00000003084 A0A1W2PPM0 123 aa3.15□□□□□ -1.91
CFTR-201ENST00000003084 ACYP1P07311 99 aa3.15□□□□□ -1.91
CFTR-201ENST00000003084 DEFB1P60022 68 aa3.15□□□□□ -1.91
CFTR-201ENST00000003084 RPL39P62891 51 aaKnown RBP3.15□□□□□ -1.91
CFTR-201ENST00000003084 DIRC1Q969H9 104 aa3.15□□□□□ -1.91
CFTR-201ENST00000003084 DYSFO75923 2080 aa3.15□□□□□ -1.91
CFTR-201ENST00000003084 NCR3O14931 201 aa3.14□□□□□ -1.91
CFTR-201ENST00000003084 DLEU1O43261 78 aa3.14□□□□□ -1.91
CFTR-201ENST00000003084 C10orf99Q6UWK7 81 aa3.14□□□□□ -1.91
CFTR-201ENST00000003084 MUSTN1Q8IVN3 82 aa3.14□□□□□ -1.91
CFTR-201ENST00000003084 SNRNP200O75643 2136 aaKnown RBP3.14□□□□□ -1.91
CFTR-201ENST00000003084 IGLV2-8P01709 118 aa3.14□□□□□ -1.91
CFTR-201ENST00000003084 DEFB105AQ8NG35 78 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms