RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CLUHP3Q96NS8 147 aa12.15□□□□□ -0.47
PHGDH-216ENST00000641375 IGHV1OR15-1A0A075B7D0 117 aa12.14□□□□□ -0.47
PHGDH-216ENST00000641375 GAGE12BA1L429 117 aa12.14□□□□□ -0.47
PHGDH-216ENST00000641375 M0R381 172 aa12.14□□□□□ -0.47
PHGDH-216ENST00000641375 ODF3L2Q3SX64 289 aa12.14□□□□□ -0.47
PHGDH-216ENST00000641375 FAM19A2Q8N3H0 131 aa12.14□□□□□ -0.47
PHGDH-216ENST00000641375 OR11H12B2RN74 326 aa12.13□□□□□ -0.47
PHGDH-216ENST00000641375 PRSS3P2Q8NHM4 247 aa12.13□□□□□ -0.47
PHGDH-216ENST00000641375 IGLL1P15814 213 aa12.12□□□□□ -0.47
PHGDH-216ENST00000641375 AMMECR1LQ6DCA0 310 aa12.12□□□□□ -0.47
PHGDH-216ENST00000641375 F8P00451 2351 aa12.12□□□□□ -0.47
PHGDH-216ENST00000641375 NXPH4O95158 308 aa12.12□□□□□ -0.47
PHGDH-216ENST00000641375 C12orf54Q6X4T0 127 aa12.12□□□□□ -0.47
PHGDH-216ENST00000641375 ST20Q9HBF5 79 aa12.12□□□□□ -0.47
PHGDH-216ENST00000641375 AP5S1Q9NUS5 200 aa12.12□□□□□ -0.47
PHGDH-216ENST00000641375 IGHV3-16A0A0C4DH30 117 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 RBMY1BA6NDE4 496 aaKnown RBP12.11□□□□□ -0.47
PHGDH-216ENST00000641375 RBMY1EA6NEQ0 496 aaKnown RBP12.11□□□□□ -0.47
PHGDH-216ENST00000641375 CRXO43186 299 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-216ENST00000641375 RBMY1DP0C7P1 496 aaKnown RBP12.11□□□□□ -0.47
PHGDH-216ENST00000641375 FXYD7P58549 80 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 BVES-AS1Q5T3Y7 98 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 FA2HQ7L5A8 372 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 STHQ8IWL8 128 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 Q8N1Y9 231 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 AP1S3Q96PC3 154 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 FAM110AQ9BQ89 295 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 TRGV11A0A075B6L2 103 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 G3V4G9 280 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 SMKR1H3BMG3 65 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 NPYP01303 97 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 MPV17L2Q567V2 206 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 ATOH7Q8N100 152 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 LINC00482Q8N8I6 264 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 DPH3P1Q9H4G8 78 aa12.11□□□□□ -0.47
PHGDH-216ENST00000641375 NCR2O95944 276 aa12.1□□□□□ -0.47
PHGDH-216ENST00000641375 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-216ENST00000641375 C9orf85Q96MD7 179 aa12.1□□□□□ -0.47
PHGDH-216ENST00000641375 MUC4Q99102 2169 aa12.1□□□□□ -0.47
PHGDH-216ENST00000641375 IGHV1-24A0A0C4DH33 117 aa12.09□□□□□ -0.47
PHGDH-216ENST00000641375 SCGB1A1P11684 91 aa12.09□□□□□ -0.47
PHGDH-216ENST00000641375 IFI27P40305 119 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-216ENST00000641375 RIPPLY3P57055 190 aa12.09□□□□□ -0.47
PHGDH-216ENST00000641375 MRAP2Q96G30 205 aa12.09□□□□□ -0.47
PHGDH-216ENST00000641375 MAP1LC3AQ9H492 121 aa12.09□□□□□ -0.47
PHGDH-216ENST00000641375 LOC389332A0A1B0GUA5 103 aa12.09□□□□□ -0.47
PHGDH-216ENST00000641375 TNFRSF6BO95407 300 aa12.08□□□□□ -0.48
PHGDH-216ENST00000641375 SYT8Q8NBV8 401 aa12.08□□□□□ -0.48
PHGDH-216ENST00000641375 NIPBLQ6KC79 2804 aaeCLIP12.08□□□□□ -0.48
PHGDH-216ENST00000641375 SPRY2O43597 315 aa12.08□□□□□ -0.48
PHGDH-216ENST00000641375 INSP01308 110 aa12.08□□□□□ -0.48
PHGDH-216ENST00000641375 RBMY1A1P0DJD3 496 aaKnown RBP12.08□□□□□ -0.48
PHGDH-216ENST00000641375 RBMY1CP0DJD4 496 aa12.08□□□□□ -0.48
PHGDH-216ENST00000641375 RBMY1FQ15415 496 aaKnown RBP12.08□□□□□ -0.48
PHGDH-216ENST00000641375 BEAN1Q3B7T3 259 aa12.08□□□□□ -0.48
PHGDH-216ENST00000641375 C14orf178Q8N769 122 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-216ENST00000641375 MDFICQ9P1T7 246 aa12.08□□□□□ -0.48
PHGDH-216ENST00000641375 NUDT3O95989 172 aa12.07□□□□□ -0.48
PHGDH-216ENST00000641375 SMIM17P0DL12 118 aa12.07□□□□□ -0.48
PHGDH-216ENST00000641375 TRPT1Q86TN4 253 aaKnown RBP12.07□□□□□ -0.48
PHGDH-216ENST00000641375 CITED1Q99966 193 aa12.07□□□□□ -0.48
PHGDH-216ENST00000641375 ERASQ7Z444 233 aa12.06□□□□□ -0.48
PHGDH-216ENST00000641375 NXT2Q9NPJ8 142 aaKnown RBP12.06□□□□□ -0.48
PHGDH-216ENST00000641375 LEPROTL1O95214 131 aa12.06□□□□□ -0.48
PHGDH-216ENST00000641375 INSL3P51460 131 aa12.06□□□□□ -0.48
PHGDH-216ENST00000641375 LINC00467Q9BRT7 94 aa12.06□□□□□ -0.48
PHGDH-216ENST00000641375 GAS8-AS1O95177 125 aa12.05□□□□□ -0.48
PHGDH-216ENST00000641375 SLC25A34Q6PIV7 304 aa12.05□□□□□ -0.48
PHGDH-216ENST00000641375 TRAV26-2A0A0B4J265 109 aa12.05□□□□□ -0.48
PHGDH-216ENST00000641375 BAHCC1Q9P281 2608 aa12.04□□□□□ -0.48
PHGDH-216ENST00000641375 TRAV8-6A0A0B4J262 113 aa12.04□□□□□ -0.48
PHGDH-216ENST00000641375 GATA1P15976 413 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-216ENST00000641375 UFSP1Q6NVU6 142 aa12.04□□□□□ -0.48
PHGDH-216ENST00000641375 GTF2H5Q6ZYL4 71 aa12.04□□□□□ -0.48
PHGDH-216ENST00000641375 POM121L12Q8N7R1 296 aa12.04□□□□□ -0.48
PHGDH-216ENST00000641375 NRACQ8N912 160 aa12.04□□□□□ -0.48
PHGDH-216ENST00000641375 PPP1R17O96001 155 aa12.03□□□□□ -0.48
PHGDH-216ENST00000641375 MGPP08493 103 aa12.03□□□□□ -0.48
PHGDH-216ENST00000641375 HTN1P15515 57 aa12.03□□□□□ -0.48
PHGDH-216ENST00000641375 LINC01587Q99440 93 aa12.03□□□□□ -0.48
PHGDH-216ENST00000641375 HSPB8Q9UJY1 196 aa12.03□□□□□ -0.48
PHGDH-216ENST00000641375 GAGE10A6NGK3 116 aa12.03□□□□□ -0.48
PHGDH-216ENST00000641375 TMEM70Q9BUB7 260 aa12.03□□□□□ -0.48
PHGDH-216ENST00000641375 KIF25-AS1Q9Y6Z4 181 aa12.03□□□□□ -0.48
PHGDH-216ENST00000641375 LINC01546A6NGU7 62 aa12.02□□□□□ -0.48
PHGDH-216ENST00000641375 C9orf66Q5T8R8 295 aa12.02□□□□□ -0.48
PHGDH-216ENST00000641375 C19orf73Q9NVV2 129 aa12.02□□□□□ -0.48
PHGDH-216ENST00000641375 XCL2Q9UBD3 114 aa12.02□□□□□ -0.48
PHGDH-216ENST00000641375 ZNF415Q09FC8 603 aa12.02□□□□□ -0.49
PHGDH-216ENST00000641375 ZNF876PQ49A33 203 aa12.02□□□□□ -0.49
PHGDH-216ENST00000641375 Q8N8P6 123 aa12.02□□□□□ -0.49
PHGDH-216ENST00000641375 NEGR1Q7Z3B1 354 aa12.01□□□□□ -0.49
PHGDH-216ENST00000641375 TEP1Q99973 2627 aaKnown RBP12.01□□□□□ -0.49
PHGDH-216ENST00000641375 JMJD1CQ15652 2540 aa12.01□□□□□ -0.49
PHGDH-216ENST00000641375 HBDP02042 147 aa12.01□□□□□ -0.49
PHGDH-216ENST00000641375 LINC00315P59091 139 aa12.01□□□□□ -0.49
PHGDH-216ENST00000641375 C20orf78Q9BR46 151 aa12.01□□□□□ -0.49
PHGDH-216ENST00000641375 TENM1Q9UKZ4 2725 aa12□□□□□ -0.49
PHGDH-216ENST00000641375 A0A1B0GV72 72 aa12□□□□□ -0.49
PHGDH-216ENST00000641375 SEC11AP67812 179 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms