RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 LINC00315P59091 139 aa12.66□□□□□ -0.38
PHGDH-208ENST00000641023 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-208ENST00000641023 RASL10AQ92737 203 aa12.66□□□□□ -0.38
PHGDH-208ENST00000641023 SUMO2P61956 95 aaKnown RBP12.65□□□□□ -0.38
PHGDH-208ENST00000641023 PET117Q6UWS5 81 aa12.65□□□□□ -0.38
PHGDH-208ENST00000641023 XCL2Q9UBD3 114 aa12.65□□□□□ -0.38
PHGDH-208ENST00000641023 A0A087WWL8 130 aa12.65□□□□□ -0.39
PHGDH-208ENST00000641023 LINC00587B1AMM8 73 aa12.65□□□□□ -0.39
PHGDH-208ENST00000641023 F5H697 171 aa12.64□□□□□ -0.39
PHGDH-208ENST00000641023 FAM74A4Q5TZK3 123 aa12.64□□□□□ -0.39
PHGDH-208ENST00000641023 TMEM208Q9BTX3 173 aa12.64□□□□□ -0.39
PHGDH-208ENST00000641023 PAM16Q9Y3D7 125 aa12.64□□□□□ -0.39
PHGDH-208ENST00000641023 DDTP30046 118 aa12.63□□□□□ -0.39
PHGDH-208ENST00000641023 FCER1GP30273 86 aa12.63□□□□□ -0.39
PHGDH-208ENST00000641023 INSL3P51460 131 aa12.63□□□□□ -0.39
PHGDH-208ENST00000641023 ZNF415Q09FC8 603 aa12.63□□□□□ -0.39
PHGDH-208ENST00000641023 SMIM2Q9BVW6 85 aa12.63□□□□□ -0.39
PHGDH-208ENST00000641023 KIR2DL5BA0A0G2JN68 375 aa12.63□□□□□ -0.39
PHGDH-208ENST00000641023 KIR2DL5BA0A0G2JPC4 375 aa12.63□□□□□ -0.39
PHGDH-208ENST00000641023 LAGE3Q14657 143 aa12.63□□□□□ -0.39
PHGDH-208ENST00000641023 SPATA12Q7Z6I5 190 aa12.63□□□□□ -0.39
PHGDH-208ENST00000641023 KIR2DL5AQ8N109 375 aa12.63□□□□□ -0.39
PHGDH-208ENST00000641023 RPL39LQ96EH5 51 aaKnown RBP12.63□□□□□ -0.39
PHGDH-208ENST00000641023 CITED1Q99966 193 aa12.63□□□□□ -0.39
PHGDH-208ENST00000641023 F8P00451 2351 aa12.62□□□□□ -0.39
PHGDH-208ENST00000641023 C19orf73Q9NVV2 129 aa12.62□□□□□ -0.39
PHGDH-208ENST00000641023 H0Y8G0 127 aa12.61□□□□□ -0.39
PHGDH-208ENST00000641023 K7EMI3 77 aa12.61□□□□□ -0.39
PHGDH-208ENST00000641023 CRYGDP07320 174 aa12.61□□□□□ -0.39
PHGDH-208ENST00000641023 SUMO4Q6EEV6 95 aa12.61□□□□□ -0.39
PHGDH-208ENST00000641023 NIPBLQ6KC79 2804 aaeCLIP12.61□□□□□ -0.39
PHGDH-208ENST00000641023 M0R2P5 195 aa12.61□□□□□ -0.39
PHGDH-208ENST00000641023 PIK3CD-AS1Q5SR53 167 aa12.61□□□□□ -0.39
PHGDH-208ENST00000641023 ATOH7Q8N100 152 aa12.61□□□□□ -0.39
PHGDH-208ENST00000641023 ZNF56Q15929 161 aa12.6□□□□□ -0.39
PHGDH-208ENST00000641023 ZNF705AQ6ZN79 300 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-208ENST00000641023 TCAPO15273 167 aa12.6□□□□□ -0.39
PHGDH-208ENST00000641023 PRM2P04554 102 aa12.6□□□□□ -0.39
PHGDH-208ENST00000641023 C1orf158Q8N1D5 194 aa12.6□□□□□ -0.39
PHGDH-208ENST00000641023 TMEM158Q8WZ71 300 aa12.6□□□□□ -0.39
PHGDH-208ENST00000641023 SPXQ9BT56 116 aa12.6□□□□□ -0.39
PHGDH-208ENST00000641023 ST20Q9HBF5 79 aa12.6□□□□□ -0.39
PHGDH-208ENST00000641023 SPATA45Q537H7 98 aa12.59□□□□□ -0.39
PHGDH-208ENST00000641023 ORMDL2Q53FV1 153 aa12.59□□□□□ -0.39
PHGDH-208ENST00000641023 C9orf66Q5T8R8 295 aa12.59□□□□□ -0.39
PHGDH-208ENST00000641023 PTH2Q96A98 100 aa12.59□□□□□ -0.39
PHGDH-208ENST00000641023 IFI27L1Q96BM0 104 aa12.59□□□□□ -0.39
PHGDH-208ENST00000641023 WFDC10AQ9H1F0 79 aa12.59□□□□□ -0.39
PHGDH-208ENST00000641023 IGHV3OR16-12A0A075B7B8 117 aa12.58□□□□□ -0.39
PHGDH-208ENST00000641023 TRAV9-2A0A087WT02 112 aa12.58□□□□□ -0.39
PHGDH-208ENST00000641023 LINC01545Q5VT33 79 aa12.58□□□□□ -0.39
PHGDH-208ENST00000641023 C11orf72Q8NBR9 251 aa12.58□□□□□ -0.39
PHGDH-208ENST00000641023 C1QTNF4Q9BXJ3 329 aa12.58□□□□□ -0.39
PHGDH-208ENST00000641023 A8MWV9 139 aa12.58□□□□□ -0.4
PHGDH-208ENST00000641023 RPL32P62910 135 aaKnown RBP12.57□□□□□ -0.4
PHGDH-208ENST00000641023 DEFA6Q01524 100 aa12.57□□□□□ -0.4
PHGDH-208ENST00000641023 CSTL1Q9H114 145 aa12.57□□□□□ -0.4
PHGDH-208ENST00000641023 NUDT3O95989 172 aa12.57□□□□□ -0.4
PHGDH-208ENST00000641023 MORN3Q6PF18 240 aaPredicted RBP12.57□□□□□ -0.4
PHGDH-208ENST00000641023 GTSCR1Q86UQ5 136 aa12.57□□□□□ -0.4
PHGDH-208ENST00000641023 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
PHGDH-208ENST00000641023 JMJD1CQ15652 2540 aa12.56□□□□□ -0.4
PHGDH-208ENST00000641023 M0QY20 66 aa12.56□□□□□ -0.4
PHGDH-208ENST00000641023 RPL35AP18077 110 aaKnown RBP12.56□□□□□ -0.4
PHGDH-208ENST00000641023 MCRIP2Q9BUT9 160 aaKnown RBP12.56□□□□□ -0.4
PHGDH-208ENST00000641023 TRBV6-5A0A0K0K1A5 114 aa12.55□□□□□ -0.4
PHGDH-208ENST00000641023 GOLT1BQ9Y3E0 138 aa12.55□□□□□ -0.4
PHGDH-208ENST00000641023 H7C1H1 209 aa12.55□□□□□ -0.4
PHGDH-208ENST00000641023 VCYO14598 125 aa12.55□□□□□ -0.4
PHGDH-208ENST00000641023 ATP5LO75964 103 aa12.55□□□□□ -0.4
PHGDH-208ENST00000641023 POLR2KP53803 58 aaKnown RBP12.55□□□□□ -0.4
PHGDH-208ENST00000641023 LGALS9BQ3B8N2 356 aa12.55□□□□□ -0.4
PHGDH-208ENST00000641023 MAJINQ3KP22 176 aa12.55□□□□□ -0.4
PHGDH-208ENST00000641023 LGALS9CQ6DKI2 356 aa12.55□□□□□ -0.4
PHGDH-208ENST00000641023 NDUFAF3Q9BU61 184 aa12.55□□□□□ -0.4
PHGDH-208ENST00000641023 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
PHGDH-208ENST00000641023 SDHAF1A6NFY7 115 aa12.54□□□□□ -0.4
PHGDH-208ENST00000641023 HSBP1L1C9JCN9 74 aa12.54□□□□□ -0.4
PHGDH-208ENST00000641023 AZU1P20160 251 aa12.54□□□□□ -0.4
PHGDH-208ENST00000641023 KIR2DL4Q99706 377 aa12.54□□□□□ -0.4
PHGDH-208ENST00000641023 MIEN1Q9BRT3 115 aa12.54□□□□□ -0.4
PHGDH-208ENST00000641023 GIG44P09565 113 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-208ENST00000641023 TMEM263Q8WUH6 116 aaKnown RBP12.53□□□□□ -0.4
PHGDH-208ENST00000641023 PMCHL2Q9BQD1 86 aa12.53□□□□□ -0.4
PHGDH-208ENST00000641023 G0S2P27469 103 aa12.53□□□□□ -0.4
PHGDH-208ENST00000641023 PRSS1P07477 247 aa12.52□□□□□ -0.4
PHGDH-208ENST00000641023 IGLL1P15814 213 aa12.52□□□□□ -0.4
PHGDH-208ENST00000641023 RNASE8Q8TDE3 154 aaKnown RBP12.52□□□□□ -0.4
PHGDH-208ENST00000641023 EDA2RQ9HAV5 297 aa12.52□□□□□ -0.4
PHGDH-208ENST00000641023 TRBV27A0A0K0K1C4 114 aa12.52□□□□□ -0.41
PHGDH-208ENST00000641023 RHODO00212 210 aa12.52□□□□□ -0.41
PHGDH-208ENST00000641023 CFAP126Q5VTH2 177 aa12.52□□□□□ -0.41
PHGDH-208ENST00000641023 MRPL16Q9NX20 251 aaKnown RBP12.52□□□□□ -0.41
PHGDH-208ENST00000641023 ATRQ13535 2644 aa12.51□□□□□ -0.41
PHGDH-208ENST00000641023 IGLC3P0DOY3 106 aa12.51□□□□□ -0.41
PHGDH-208ENST00000641023 SPATA3Q8NHX4 192 aa12.51□□□□□ -0.41
PHGDH-208ENST00000641023 TOMM6Q96B49 74 aa12.51□□□□□ -0.41
PHGDH-208ENST00000641023 C14orf144Q96I85 54 aa12.51□□□□□ -0.41
PHGDH-208ENST00000641023 TEP1Q99973 2627 aaKnown RBP12.51□□□□□ -0.41
PHGDH-208ENST00000641023 IGHV3-73A0A0B4J1V6 119 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms