RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 DMBT1Q9UGM3 2413 aaPredicted RBP9.27□□□□□ -0.93
LINC00339-211ENST00000641009 TMSB15BA0A087X1C1 80 aa9.27□□□□□ -0.93
LINC00339-211ENST00000641009 LAGE3Q14657 143 aa9.27□□□□□ -0.93
LINC00339-211ENST00000641009 FAM74A4Q5TZK3 123 aa9.27□□□□□ -0.93
LINC00339-211ENST00000641009 SYT8Q8NBV8 401 aa9.27□□□□□ -0.93
LINC00339-211ENST00000641009 OR11H4Q8NGC9 324 aa9.27□□□□□ -0.93
LINC00339-211ENST00000641009 NTN5Q8WTR8 489 aaPredicted RBP9.27□□□□□ -0.93
LINC00339-211ENST00000641009 FRZBQ92765 325 aa9.27□□□□□ -0.93
LINC00339-211ENST00000641009 A0A087WWL8 130 aa9.26□□□□□ -0.93
LINC00339-211ENST00000641009 LTAP01374 205 aa9.26□□□□□ -0.93
LINC00339-211ENST00000641009 WFDC2Q14508 124 aa9.26□□□□□ -0.93
LINC00339-211ENST00000641009 ZNF674Q2M3X9 581 aa9.26□□□□□ -0.93
LINC00339-211ENST00000641009 DAZ4Q86SG3 579 aaKnown RBP9.26□□□□□ -0.93
LINC00339-211ENST00000641009 DAZ3Q9NR90 486 aaKnown RBP9.26□□□□□ -0.93
LINC00339-211ENST00000641009 PHLDA3Q9Y5J5 127 aa9.26□□□□□ -0.93
LINC00339-211ENST00000641009 FLG2Q5D862 2391 aaPredicted RBP9.25□□□□□ -0.93
LINC00339-211ENST00000641009 M0R381 172 aa9.25□□□□□ -0.93
LINC00339-211ENST00000641009 RHODO00212 210 aa9.25□□□□□ -0.93
LINC00339-211ENST00000641009 INAFM2P0DMQ5 153 aa9.25□□□□□ -0.93
LINC00339-211ENST00000641009 LINC01559Q495D7 138 aa9.25□□□□□ -0.93
LINC00339-211ENST00000641009 STOML3Q8TAV4 291 aa9.25□□□□□ -0.93
LINC00339-211ENST00000641009 TRBV6-1A0A0K0K1D8 114 aa9.24□□□□□ -0.93
LINC00339-211ENST00000641009 PAGE4O60829 102 aa9.24□□□□□ -0.93
LINC00339-211ENST00000641009 TPT1P13693 172 aaKnown RBP9.24□□□□□ -0.93
LINC00339-211ENST00000641009 AKR1C3P42330 323 aa9.24□□□□□ -0.93
LINC00339-211ENST00000641009 SFRP2Q96HF1 295 aa9.24□□□□□ -0.93
LINC00339-211ENST00000641009 TCEAL7Q9BRU2 100 aa9.24□□□□□ -0.93
LINC00339-211ENST00000641009 TM2D2Q9BX73 214 aa9.24□□□□□ -0.93
LINC00339-211ENST00000641009 A0A087WWC5 75 aa9.23□□□□□ -0.93
LINC00339-211ENST00000641009 A0A1B0GV50 99 aa9.23□□□□□ -0.93
LINC00339-211ENST00000641009 LECT2O14960 151 aa9.23□□□□□ -0.93
LINC00339-211ENST00000641009 IFITM2Q01629 132 aa9.23□□□□□ -0.93
LINC00339-211ENST00000641009 KCNRGQ8N5I3 272 aa9.23□□□□□ -0.93
LINC00339-211ENST00000641009 TMEM70Q9BUB7 260 aa9.23□□□□□ -0.93
LINC00339-211ENST00000641009 TRAV8-3A0A0A6YYJ7 113 aa9.22□□□□□ -0.93
LINC00339-211ENST00000641009 ZNF345Q14585 488 aa9.22□□□□□ -0.93
LINC00339-211ENST00000641009 FAM213BQ8TBF2 198 aa9.22□□□□□ -0.93
LINC00339-211ENST00000641009 SFT2D1Q8WV19 159 aa9.22□□□□□ -0.93
LINC00339-211ENST00000641009 FAM30AQ9NZY2 134 aa9.22□□□□□ -0.93
LINC00339-211ENST00000641009 SCO2A0A1W2PP80 73 aa9.21□□□□□ -0.93
LINC00339-211ENST00000641009 TCTE3Q8IZS6 198 aa9.21□□□□□ -0.93
LINC00339-211ENST00000641009 ZFP82Q8N141 532 aa9.21□□□□□ -0.93
LINC00339-211ENST00000641009 DNAJC30Q96LL9 226 aa9.21□□□□□ -0.93
LINC00339-211ENST00000641009 SEC11BP0C7V7 166 aa9.21□□□□□ -0.94
LINC00339-211ENST00000641009 RPL19P84098 196 aaKnown RBP9.21□□□□□ -0.94
LINC00339-211ENST00000641009 NDUFA5Q16718 116 aa9.21□□□□□ -0.94
LINC00339-211ENST00000641009 TOR2AQ5JU69 321 aa9.21□□□□□ -0.94
LINC00339-211ENST00000641009 NIT1Q86X76 327 aa9.21□□□□□ -0.94
LINC00339-211ENST00000641009 MBD3L1Q8WWY6 194 aa9.21□□□□□ -0.94
LINC00339-211ENST00000641009 URGCP-MRPS24S4R325 110 aa9.21□□□□□ -0.94
LINC00339-211ENST00000641009 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.2□□□□□ -0.94
LINC00339-211ENST00000641009 UMAD1C9J7I0 102 aa9.2□□□□□ -0.94
LINC00339-211ENST00000641009 FAM229AH3BQW9 127 aa9.2□□□□□ -0.94
LINC00339-211ENST00000641009 ZNF471Q9BX82 626 aaPredicted RBP9.2□□□□□ -0.94
LINC00339-211ENST00000641009 HMSDA8MTL9 139 aa9.19□□□□□ -0.94
LINC00339-211ENST00000641009 RPL36AP83881 106 aaKnown RBP9.19□□□□□ -0.94
LINC00339-211ENST00000641009 OR10AG1Q8NH19 301 aa9.19□□□□□ -0.94
LINC00339-211ENST00000641009 BAALCQ8WXS3 180 aa9.19□□□□□ -0.94
LINC00339-211ENST00000641009 RPL36ALQ969Q0 106 aaKnown RBP9.19□□□□□ -0.94
LINC00339-211ENST00000641009 MLST8Q9BVC4 326 aa9.19□□□□□ -0.94
LINC00339-211ENST00000641009 KLK12Q9UKR0 248 aa9.19□□□□□ -0.94
LINC00339-211ENST00000641009 TMA7Q9Y2S6 64 aaKnown RBP9.19□□□□□ -0.94
LINC00339-211ENST00000641009 TRBV7-3A0A075B6L6 115 aa9.18□□□□□ -0.94
LINC00339-211ENST00000641009 TRBV10-1A0A0K0K1A3 114 aa9.18□□□□□ -0.94
LINC00339-211ENST00000641009 KANTRA0A1W2PQU2 76 aa9.18□□□□□ -0.94
LINC00339-211ENST00000641009 BCL2L11O43521 198 aa9.18□□□□□ -0.94
LINC00339-211ENST00000641009 S100A9P06702 114 aaKnown RBP9.18□□□□□ -0.94
LINC00339-211ENST00000641009 NKX2-5P52952 324 aaPredicted RBP9.18□□□□□ -0.94
LINC00339-211ENST00000641009 UBE2D3P61077 147 aa9.18□□□□□ -0.94
LINC00339-211ENST00000641009 UBE2D2P62837 147 aa9.18□□□□□ -0.94
LINC00339-211ENST00000641009 BAGE2Q86Y30 109 aa9.18□□□□□ -0.94
LINC00339-211ENST00000641009 IGKV2D-24A0A075B6R9 120 aa9.17□□□□□ -0.94
LINC00339-211ENST00000641009 A0A087WX48 190 aa9.17□□□□□ -0.94
LINC00339-211ENST00000641009 A0A0D9SG52 128 aa9.17□□□□□ -0.94
LINC00339-211ENST00000641009 MUC21A0A0G2JKD1 596 aa9.17□□□□□ -0.94
LINC00339-211ENST00000641009 MUC21A0A140T8X8 626 aa9.17□□□□□ -0.94
LINC00339-211ENST00000641009 ZNF56Q15929 161 aa9.17□□□□□ -0.94
LINC00339-211ENST00000641009 PRR27Q6MZM9 219 aa9.17□□□□□ -0.94
LINC00339-211ENST00000641009 COX11Q9Y6N1 276 aa9.17□□□□□ -0.94
LINC00339-211ENST00000641009 C1QBP02746 253 aa9.16□□□□□ -0.94
LINC00339-211ENST00000641009 H2AFB1P0C5Y9 115 aa9.16□□□□□ -0.94
LINC00339-211ENST00000641009 RAB4BP61018 213 aa9.16□□□□□ -0.94
LINC00339-211ENST00000641009 LINC01620Q4KN68 170 aa9.16□□□□□ -0.94
LINC00339-211ENST00000641009 UBE2WQ96B02 151 aa9.16□□□□□ -0.94
LINC00339-211ENST00000641009 RMI2Q96E14 147 aa9.16□□□□□ -0.94
LINC00339-211ENST00000641009 SNAI2O43623 268 aa9.15□□□□□ -0.94
LINC00339-211ENST00000641009 CXCL1P09341 107 aa9.15□□□□□ -0.94
LINC00339-211ENST00000641009 S100A1P23297 94 aa9.15□□□□□ -0.94
LINC00339-211ENST00000641009 SSTP61278 116 aa9.15□□□□□ -0.94
LINC00339-211ENST00000641009 Q6ZSA8 131 aa9.15□□□□□ -0.94
LINC00339-211ENST00000641009 TMUB2Q71RG4 321 aa9.15□□□□□ -0.94
LINC00339-211ENST00000641009 NEXN-AS1Q8NBZ9 246 aa9.15□□□□□ -0.94
LINC00339-211ENST00000641009 OR10G8Q8NGN5 311 aa9.15□□□□□ -0.94
LINC00339-211ENST00000641009 TMEM262E9PQX1 116 aa9.15□□□□□ -0.95
LINC00339-211ENST00000641009 CCL20P78556 96 aa9.15□□□□□ -0.95
LINC00339-211ENST00000641009 SPANXN1Q5VSR9 72 aa9.15□□□□□ -0.95
LINC00339-211ENST00000641009 KCNIP4Q6PIL6 250 aa9.15□□□□□ -0.95
LINC00339-211ENST00000641009 CHCHD7Q9BUK0 85 aa9.15□□□□□ -0.95
LINC00339-211ENST00000641009 DERL1Q9BUN8 251 aa9.15□□□□□ -0.95
LINC00339-211ENST00000641009 SSBP4Q9BWG4 385 aaPredicted RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms