RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 INSP01308 110 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 BAALCQ8WXS3 180 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 IGHV4-4A0A075B6R2 117 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 A0A087WWL8 130 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 ZFP36P26651 326 aaKnown RBP4.27□□□□□ -1.73
SCN3A-210ENST00000640652 URB1-AS1Q96HZ7 61 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 SIRPDQ9H106 197 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 LINC01619G3V211 115 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 MSMBP08118 114 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 RNF185Q96GF1 192 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 TP73-AS1Q9UF72 201 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 PRO1854Q9UHT4 67 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 IGKV3D-20A0A0C4DH25 116 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 ZNF688P0C7X2 276 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 ZNF80P51504 273 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-210ENST00000640652 CKS1BP61024 79 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 BRD3OSQ6XYD6 125 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 TIMM17AQ99595 171 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 MSRB1Q9NZV6 116 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 E9PLD3 99 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 RHODO00212 210 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 ZNF415Q09FC8 603 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 ETDBQ3ZM63 59 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 RUSC1-AS1Q66K80 236 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 NRACQ8N912 160 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 IGKV3-20P01619 116 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 ODF3Q96PU9 254 aa4.27□□□□□ -1.73
SCN3A-210ENST00000640652 PRSS47A8MTI9 375 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 IGLL5B9A064 214 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 J3QQQ9 107 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 MXRA5Q9NR99 2828 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 AZU1P20160 251 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 LINC01356Q8N9X3 169 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 BEX4Q9NWD9 120 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-210ENST00000640652 TEX48A0A1B0GUV7 120 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 DNAL4O96015 105 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 RPL32P62910 135 aaKnown RBP4.26□□□□□ -1.73
SCN3A-210ENST00000640652 ADORA2A-AS1P86434 159 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 ANXA2RQ3ZCQ2 193 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 ZNF876PQ49A33 203 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 RPL39LQ96EH5 51 aaKnown RBP4.26□□□□□ -1.73
SCN3A-210ENST00000640652 TMEM101Q96IK0 257 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 MRGPRG-AS1Q2M3A8 158 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 C19orf54Q5BKX5 351 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 TRAV8-2A0A0B4J237 113 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 PRSS29PA6NIE9 313 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 J3QLI3 93 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 NEXN-AS1Q8NBZ9 246 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 COX6B1P14854 86 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 LOXL1Q08397 574 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-210ENST00000640652 UFSP1Q6NVU6 142 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 MORN3Q6PF18 240 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-210ENST00000640652 ZMAT4Q9H898 229 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 MAST4O15021 2626 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 ITPR2Q14571 2701 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 IGHV1OR15-1A0A075B7D0 117 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 SRD5A1P18405 259 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 C11orf71Q6IPW1 123 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 TEN1Q86WV5 123 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 OVOL2Q9BRP0 275 aa4.26□□□□□ -1.73
SCN3A-210ENST00000640652 PRAC2D3DTV9 90 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 LINC00527Q9UJ94 153 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 TRAV2A0A0B4J234 112 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 GATA1P15976 413 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-210ENST00000640652 ANAPC13Q9BS18 74 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 SELENOKQ9Y6D0 94 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 IGHG2P01859 326 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 EMP1P54849 157 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 RASL10AQ92737 203 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 C11orf86A6NJI1 115 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 SFTA2Q6UW10 78 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 SPINK8P0C7L1 97 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 SPANXDQ9BXN6 97 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 F8P00451 2351 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 K7EMT4 169 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 IGF1P05019 195 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 LINC01587Q99440 93 aa4.25□□□□□ -1.73
SCN3A-210ENST00000640652 GPHB5Q86YW7 130 aa4.24□□□□□ -1.73
SCN3A-210ENST00000640652 SMAD5-AS1Q9Y6J3 95 aa4.24□□□□□ -1.73
SCN3A-210ENST00000640652 IGHV4-39P01824 125 aa4.24□□□□□ -1.73
SCN3A-210ENST00000640652 LY6DQ14210 128 aa4.24□□□□□ -1.73
SCN3A-210ENST00000640652 TSSC4Q9Y5U2 329 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-210ENST00000640652 TMEM89A2RUT3 159 aa4.24□□□□□ -1.73
SCN3A-210ENST00000640652 NSUN5P1Q3KNT7 163 aa4.24□□□□□ -1.73
SCN3A-210ENST00000640652 Q5PR19 223 aa4.24□□□□□ -1.73
SCN3A-210ENST00000640652 ZFP2Q6ZN57 461 aa4.24□□□□□ -1.73
SCN3A-210ENST00000640652 ASH1LQ9NR48 2969 aaKnown RBP4.24□□□□□ -1.73
SCN3A-210ENST00000640652 HHLA3Q9XRX5 114 aa4.24□□□□□ -1.73
SCN3A-210ENST00000640652 CLPSL1A2RUU4 121 aa4.24□□□□□ -1.73
SCN3A-210ENST00000640652 TRAV8-4A0A0B4J246 113 aa4.24□□□□□ -1.73
SCN3A-210ENST00000640652 PIP4P2Q8N4L2 257 aa4.24□□□□□ -1.73
SCN3A-210ENST00000640652 TGFAP01135 160 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 SUMO4Q6EEV6 95 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 C10orf126Q8N4M7 172 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 ZFAND2AQ8N6M9 145 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 VPREB3Q9UKI3 123 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 AMTNQ6UX39 209 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 PSMG3-AS1Q96PY0 264 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 IGHV3-64A0A075B6Q5 118 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 F8W735 103 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms