RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-231	ENST00000640501	DPM2	O94777	84 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501	LY6G6D	O95868	133 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501	PF4	P02776	101 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501	KIR3DS1	Q14943	382 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501	FAM74A4	Q5TZK3	123 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501	C12orf54	Q6X4T0	127 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501	C11orf44	Q8N8P7	122 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501	RASL10A	Q92737	203 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501	SCGB3A1	Q96QR1	104 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501	LINC01587	Q99440	93 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501	CYSLTR1	Q9Y271	337 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501	ZNF256	Q9Y2P7	627 aa	Predicted RBP	6.15	□□□□□ -1.42
PNKP-231	ENST00000640501	PDZD2	O15018	2839 aa		6.15	□□□□□ -1.43
PNKP-231	ENST00000640501	VPS13C	Q709C8	3753 aa		6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	TRAV12-1	A0A0B4J245	112 aa		6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	IGKC	P01834	107 aa		6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	GATA1	P15976	413 aa	Predicted RBP	6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	INSL3	P51460	131 aa		6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	PROK1	P58294	105 aa		6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	PAPPA-AS1	Q5QFB9	102 aa		6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	COL5A1-AS1	Q5SY13	56 aa		6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	SUMO4	Q6EEV6	95 aa		6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	MORN3	Q6PF18	240 aa	Predicted RBP	6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	TOMM6	Q96B49	74 aa		6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	TMEM141	Q96I45	108 aa		6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	C18orf15	Q96N68	181 aa		6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	CSTL1	Q9H114	145 aa		6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	EDA2R	Q9HAV5	297 aa		6.14	□□□□□ -1.43
PNKP-231	ENST00000640501	KIF25-AS1	Q9Y6Z4	181 aa		6.14	□□□□□ -1.43
PNKP-231	ENST00000640501		A0A087WWL8	130 aa		6.13	□□□□□ -1.43
PNKP-231	ENST00000640501	hDV102S1	A0JD36	115 aa		6.13	□□□□□ -1.43
PNKP-231	ENST00000640501	IGLV1-51	P01701	117 aa		6.13	□□□□□ -1.43
PNKP-231	ENST00000640501	HTN1	P15515	57 aa		6.13	□□□□□ -1.43
PNKP-231	ENST00000640501	RHOH	Q15669	191 aa		6.13	□□□□□ -1.43
PNKP-231	ENST00000640501	NSUN5P1	Q3KNT7	163 aa		6.13	□□□□□ -1.43
PNKP-231	ENST00000640501	TMEM97	Q5BJF2	176 aa		6.13	□□□□□ -1.43
PNKP-231	ENST00000640501	ERAS	Q7Z444	233 aa		6.13	□□□□□ -1.43
PNKP-231	ENST00000640501	LURAP1L	Q8IV03	231 aa		6.13	□□□□□ -1.43
PNKP-231	ENST00000640501	MDFIC	Q9P1T7	246 aa		6.13	□□□□□ -1.43
PNKP-231	ENST00000640501	CCDC168	Q8NDH2	2452 aa		6.13	□□□□□ -1.43
PNKP-231	ENST00000640501	GCN1	Q92616	2671 aa	Known RBP	6.12	□□□□□ -1.43
PNKP-231	ENST00000640501		A0A087WX48	190 aa		6.12	□□□□□ -1.43
PNKP-231	ENST00000640501	TRBV27	A0A0K0K1C4	114 aa		6.12	□□□□□ -1.43
PNKP-231	ENST00000640501	SDHAF1	A6NFY7	115 aa		6.12	□□□□□ -1.43
PNKP-231	ENST00000640501		I3L3M4	83 aa		6.12	□□□□□ -1.43
PNKP-231	ENST00000640501	SIVA1	O15304	175 aa		6.12	□□□□□ -1.43
PNKP-231	ENST00000640501	DLEU1	O43261	78 aa		6.12	□□□□□ -1.43
PNKP-231	ENST00000640501	CIDEA	O60543	219 aa		6.12	□□□□□ -1.43
PNKP-231	ENST00000640501	COX8A	P10176	69 aa		6.12	□□□□□ -1.43
PNKP-231	ENST00000640501	FXYD7	P58549	80 aa		6.12	□□□□□ -1.43
PNKP-231	ENST00000640501	ODF1	Q14990	250 aa		6.12	□□□□□ -1.43
PNKP-231	ENST00000640501	ODF3L2	Q3SX64	289 aa		6.12	□□□□□ -1.43
PNKP-231	ENST00000640501	C2orf66	Q6UXQ4	117 aa		6.12	□□□□□ -1.43
PNKP-231	ENST00000640501	RPL39L	Q96EH5	51 aa	Known RBP	6.12	□□□□□ -1.43
PNKP-231	ENST00000640501	DNAJC30	Q96LL9	226 aa		6.12	□□□□□ -1.43
PNKP-231	ENST00000640501	SNHG12	Q9BXW3	62 aa		6.12	□□□□□ -1.43
PNKP-231	ENST00000640501		F8VRH5	84 aa		6.11	□□□□□ -1.43
PNKP-231	ENST00000640501	GAS8-AS1	O95177	125 aa		6.11	□□□□□ -1.43
PNKP-231	ENST00000640501	CRYGD	P07320	174 aa		6.11	□□□□□ -1.43
PNKP-231	ENST00000640501	POLR2K	P53803	58 aa	Known RBP	6.11	□□□□□ -1.43
PNKP-231	ENST00000640501	LINC00315	P59091	139 aa		6.11	□□□□□ -1.43
PNKP-231	ENST00000640501	SMAGP	Q0VAQ4	97 aa		6.11	□□□□□ -1.43
PNKP-231	ENST00000640501	BATF	Q16520	125 aa		6.11	□□□□□ -1.43
PNKP-231	ENST00000640501	MAJIN	Q3KP22	176 aa		6.11	□□□□□ -1.43
PNKP-231	ENST00000640501	ZFP2	Q6ZN57	461 aa		6.11	□□□□□ -1.43
PNKP-231	ENST00000640501	GTSCR1	Q86UQ5	136 aa		6.11	□□□□□ -1.43
PNKP-231	ENST00000640501	TNFRSF18	Q9Y5U5	241 aa		6.11	□□□□□ -1.43
PNKP-231	ENST00000640501	SVEP1	Q4LDE5	3571 aa		6.11	□□□□□ -1.43
PNKP-231	ENST00000640501	CSMD2	Q7Z408	3487 aa		6.11	□□□□□ -1.43
PNKP-231	ENST00000640501		M0QY20	66 aa		6.1	□□□□□ -1.43
PNKP-231	ENST00000640501	NPS	P0C0P6	89 aa		6.1	□□□□□ -1.43
PNKP-231	ENST00000640501	RIPPLY3	P57055	190 aa		6.1	□□□□□ -1.43
PNKP-231	ENST00000640501	HERVK_113	P61574	105 aa		6.1	□□□□□ -1.43
PNKP-231	ENST00000640501	BEAN1	Q3B7T3	259 aa		6.1	□□□□□ -1.43
PNKP-231	ENST00000640501	C9orf66	Q5T8R8	295 aa		6.1	□□□□□ -1.43
PNKP-231	ENST00000640501	TMEM263	Q8WUH6	116 aa	Known RBP	6.1	□□□□□ -1.43
PNKP-231	ENST00000640501	TIMM17A	Q99595	171 aa		6.1	□□□□□ -1.43
PNKP-231	ENST00000640501	MCRIP2	Q9BUT9	160 aa	Known RBP	6.1	□□□□□ -1.43
PNKP-231	ENST00000640501	ZMAT4	Q9H898	229 aa		6.1	□□□□□ -1.43
PNKP-231	ENST00000640501	CHTOP	Q9Y3Y2	248 aa	Known RBP	6.1	□□□□□ -1.43
PNKP-231	ENST00000640501	CSMD1	Q96PZ7	3565 aa		6.1	□□□□□ -1.43
PNKP-231	ENST00000640501	TLN2	Q9Y4G6	2542 aa		6.09	□□□□□ -1.43
PNKP-231	ENST00000640501	HIVEP2	P31629	2446 aa		6.09	□□□□□ -1.43
PNKP-231	ENST00000640501	RBMY1B	A6NDE4	496 aa	Known RBP	6.09	□□□□□ -1.43
PNKP-231	ENST00000640501	RBMY1E	A6NEQ0	496 aa	Known RBP	6.09	□□□□□ -1.43
PNKP-231	ENST00000640501	INAFM1	C9JVW0	142 aa		6.09	□□□□□ -1.43
PNKP-231	ENST00000640501	EREG	O14944	169 aa		6.09	□□□□□ -1.43
PNKP-231	ENST00000640501	CRLF1	O75462	422 aa		6.09	□□□□□ -1.43
PNKP-231	ENST00000640501	RBMY1D	P0C7P1	496 aa	Known RBP	6.09	□□□□□ -1.43
PNKP-231	ENST00000640501	NMU	P48645	174 aa		6.09	□□□□□ -1.43
PNKP-231	ENST00000640501	C16orf74	Q96GX8	76 aa		6.09	□□□□□ -1.43
PNKP-231	ENST00000640501	SMR3A	Q99954	134 aa		6.09	□□□□□ -1.43
PNKP-231	ENST00000640501	XCL2	Q9UBD3	114 aa		6.09	□□□□□ -1.43
PNKP-231	ENST00000640501	TP53TG1	Q9Y2A0	90 aa		6.09	□□□□□ -1.43
PNKP-231	ENST00000640501	ITPR2	Q14571	2701 aa		6.09	□□□□□ -1.43
PNKP-231	ENST00000640501	SPRY2	O43597	315 aa		6.08	□□□□□ -1.44
PNKP-231	ENST00000640501	RBMY1A1	P0DJD3	496 aa	Known RBP	6.08	□□□□□ -1.44
PNKP-231	ENST00000640501	RBMY1C	P0DJD4	496 aa		6.08	□□□□□ -1.44
PNKP-231	ENST00000640501	PMVK	Q15126	192 aa		6.08	□□□□□ -1.44
PNKP-231	ENST00000640501	RBMY1F	Q15415	496 aa	Known RBP	6.08	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms