RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 DPM2O94777 84 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 LY6G6DO95868 133 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 PF4P02776 101 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 KIR3DS1Q14943 382 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 FAM74A4Q5TZK3 123 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 C12orf54Q6X4T0 127 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 C11orf44Q8N8P7 122 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 RASL10AQ92737 203 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 SCGB3A1Q96QR1 104 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 LINC01587Q99440 93 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 CYSLTR1Q9Y271 337 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 ZNF256Q9Y2P7 627 aaPredicted RBP6.15□□□□□ -1.42
PNKP-231ENST00000640501 PDZD2O15018 2839 aa6.15□□□□□ -1.43
PNKP-231ENST00000640501 VPS13CQ709C8 3753 aa6.14□□□□□ -1.43
PNKP-231ENST00000640501 TRAV12-1A0A0B4J245 112 aa6.14□□□□□ -1.43
PNKP-231ENST00000640501 IGKCP01834 107 aa6.14□□□□□ -1.43
PNKP-231ENST00000640501 GATA1P15976 413 aaPredicted RBP6.14□□□□□ -1.43
PNKP-231ENST00000640501 INSL3P51460 131 aa6.14□□□□□ -1.43
PNKP-231ENST00000640501 PROK1P58294 105 aa6.14□□□□□ -1.43
PNKP-231ENST00000640501 PAPPA-AS1Q5QFB9 102 aa6.14□□□□□ -1.43
PNKP-231ENST00000640501 COL5A1-AS1Q5SY13 56 aa6.14□□□□□ -1.43
PNKP-231ENST00000640501 SUMO4Q6EEV6 95 aa6.14□□□□□ -1.43
PNKP-231ENST00000640501 MORN3Q6PF18 240 aaPredicted RBP6.14□□□□□ -1.43
PNKP-231ENST00000640501 TOMM6Q96B49 74 aa6.14□□□□□ -1.43
PNKP-231ENST00000640501 TMEM141Q96I45 108 aa6.14□□□□□ -1.43
PNKP-231ENST00000640501 C18orf15Q96N68 181 aa6.14□□□□□ -1.43
PNKP-231ENST00000640501 CSTL1Q9H114 145 aa6.14□□□□□ -1.43
PNKP-231ENST00000640501 EDA2RQ9HAV5 297 aa6.14□□□□□ -1.43
PNKP-231ENST00000640501 KIF25-AS1Q9Y6Z4 181 aa6.14□□□□□ -1.43
PNKP-231ENST00000640501 A0A087WWL8 130 aa6.13□□□□□ -1.43
PNKP-231ENST00000640501 hDV102S1A0JD36 115 aa6.13□□□□□ -1.43
PNKP-231ENST00000640501 IGLV1-51P01701 117 aa6.13□□□□□ -1.43
PNKP-231ENST00000640501 HTN1P15515 57 aa6.13□□□□□ -1.43
PNKP-231ENST00000640501 RHOHQ15669 191 aa6.13□□□□□ -1.43
PNKP-231ENST00000640501 NSUN5P1Q3KNT7 163 aa6.13□□□□□ -1.43
PNKP-231ENST00000640501 TMEM97Q5BJF2 176 aa6.13□□□□□ -1.43
PNKP-231ENST00000640501 ERASQ7Z444 233 aa6.13□□□□□ -1.43
PNKP-231ENST00000640501 LURAP1LQ8IV03 231 aa6.13□□□□□ -1.43
PNKP-231ENST00000640501 MDFICQ9P1T7 246 aa6.13□□□□□ -1.43
PNKP-231ENST00000640501 CCDC168Q8NDH2 2452 aa6.13□□□□□ -1.43
PNKP-231ENST00000640501 GCN1Q92616 2671 aaKnown RBP6.12□□□□□ -1.43
PNKP-231ENST00000640501 A0A087WX48 190 aa6.12□□□□□ -1.43
PNKP-231ENST00000640501 TRBV27A0A0K0K1C4 114 aa6.12□□□□□ -1.43
PNKP-231ENST00000640501 SDHAF1A6NFY7 115 aa6.12□□□□□ -1.43
PNKP-231ENST00000640501 I3L3M4 83 aa6.12□□□□□ -1.43
PNKP-231ENST00000640501 SIVA1O15304 175 aa6.12□□□□□ -1.43
PNKP-231ENST00000640501 DLEU1O43261 78 aa6.12□□□□□ -1.43
PNKP-231ENST00000640501 CIDEAO60543 219 aa6.12□□□□□ -1.43
PNKP-231ENST00000640501 COX8AP10176 69 aa6.12□□□□□ -1.43
PNKP-231ENST00000640501 FXYD7P58549 80 aa6.12□□□□□ -1.43
PNKP-231ENST00000640501 ODF1Q14990 250 aa6.12□□□□□ -1.43
PNKP-231ENST00000640501 ODF3L2Q3SX64 289 aa6.12□□□□□ -1.43
PNKP-231ENST00000640501 C2orf66Q6UXQ4 117 aa6.12□□□□□ -1.43
PNKP-231ENST00000640501 RPL39LQ96EH5 51 aaKnown RBP6.12□□□□□ -1.43
PNKP-231ENST00000640501 DNAJC30Q96LL9 226 aa6.12□□□□□ -1.43
PNKP-231ENST00000640501 SNHG12Q9BXW3 62 aa6.12□□□□□ -1.43
PNKP-231ENST00000640501 F8VRH5 84 aa6.11□□□□□ -1.43
PNKP-231ENST00000640501 GAS8-AS1O95177 125 aa6.11□□□□□ -1.43
PNKP-231ENST00000640501 CRYGDP07320 174 aa6.11□□□□□ -1.43
PNKP-231ENST00000640501 POLR2KP53803 58 aaKnown RBP6.11□□□□□ -1.43
PNKP-231ENST00000640501 LINC00315P59091 139 aa6.11□□□□□ -1.43
PNKP-231ENST00000640501 SMAGPQ0VAQ4 97 aa6.11□□□□□ -1.43
PNKP-231ENST00000640501 BATFQ16520 125 aa6.11□□□□□ -1.43
PNKP-231ENST00000640501 MAJINQ3KP22 176 aa6.11□□□□□ -1.43
PNKP-231ENST00000640501 ZFP2Q6ZN57 461 aa6.11□□□□□ -1.43
PNKP-231ENST00000640501 GTSCR1Q86UQ5 136 aa6.11□□□□□ -1.43
PNKP-231ENST00000640501 TNFRSF18Q9Y5U5 241 aa6.11□□□□□ -1.43
PNKP-231ENST00000640501 SVEP1Q4LDE5 3571 aa6.11□□□□□ -1.43
PNKP-231ENST00000640501 CSMD2Q7Z408 3487 aa6.11□□□□□ -1.43
PNKP-231ENST00000640501 M0QY20 66 aa6.1□□□□□ -1.43
PNKP-231ENST00000640501 NPSP0C0P6 89 aa6.1□□□□□ -1.43
PNKP-231ENST00000640501 RIPPLY3P57055 190 aa6.1□□□□□ -1.43
PNKP-231ENST00000640501 HERVK_113P61574 105 aa6.1□□□□□ -1.43
PNKP-231ENST00000640501 BEAN1Q3B7T3 259 aa6.1□□□□□ -1.43
PNKP-231ENST00000640501 C9orf66Q5T8R8 295 aa6.1□□□□□ -1.43
PNKP-231ENST00000640501 TMEM263Q8WUH6 116 aaKnown RBP6.1□□□□□ -1.43
PNKP-231ENST00000640501 TIMM17AQ99595 171 aa6.1□□□□□ -1.43
PNKP-231ENST00000640501 MCRIP2Q9BUT9 160 aaKnown RBP6.1□□□□□ -1.43
PNKP-231ENST00000640501 ZMAT4Q9H898 229 aa6.1□□□□□ -1.43
PNKP-231ENST00000640501 CHTOPQ9Y3Y2 248 aaKnown RBP6.1□□□□□ -1.43
PNKP-231ENST00000640501 CSMD1Q96PZ7 3565 aa6.1□□□□□ -1.43
PNKP-231ENST00000640501 TLN2Q9Y4G6 2542 aa6.09□□□□□ -1.43
PNKP-231ENST00000640501 HIVEP2P31629 2446 aa6.09□□□□□ -1.43
PNKP-231ENST00000640501 RBMY1BA6NDE4 496 aaKnown RBP6.09□□□□□ -1.43
PNKP-231ENST00000640501 RBMY1EA6NEQ0 496 aaKnown RBP6.09□□□□□ -1.43
PNKP-231ENST00000640501 INAFM1C9JVW0 142 aa6.09□□□□□ -1.43
PNKP-231ENST00000640501 EREGO14944 169 aa6.09□□□□□ -1.43
PNKP-231ENST00000640501 CRLF1O75462 422 aa6.09□□□□□ -1.43
PNKP-231ENST00000640501 RBMY1DP0C7P1 496 aaKnown RBP6.09□□□□□ -1.43
PNKP-231ENST00000640501 NMUP48645 174 aa6.09□□□□□ -1.43
PNKP-231ENST00000640501 C16orf74Q96GX8 76 aa6.09□□□□□ -1.43
PNKP-231ENST00000640501 SMR3AQ99954 134 aa6.09□□□□□ -1.43
PNKP-231ENST00000640501 XCL2Q9UBD3 114 aa6.09□□□□□ -1.43
PNKP-231ENST00000640501 TP53TG1Q9Y2A0 90 aa6.09□□□□□ -1.43
PNKP-231ENST00000640501 ITPR2Q14571 2701 aa6.09□□□□□ -1.43
PNKP-231ENST00000640501 SPRY2O43597 315 aa6.08□□□□□ -1.44
PNKP-231ENST00000640501 RBMY1A1P0DJD3 496 aaKnown RBP6.08□□□□□ -1.44
PNKP-231ENST00000640501 RBMY1CP0DJD4 496 aa6.08□□□□□ -1.44
PNKP-231ENST00000640501 PMVKQ15126 192 aa6.08□□□□□ -1.44
PNKP-231ENST00000640501 RBMY1FQ15415 496 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms