RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 FASNP49327 2511 aaKnown RBP10.98□□□□□ -0.65
SCARB2-221ENST00000640341 IGHV4-4A0A075B6R2 117 aa10.98□□□□□ -0.65
SCARB2-221ENST00000640341 PLEKHB2Q96CS7 222 aa10.98□□□□□ -0.65
SCARB2-221ENST00000640341 ZNF56Q15929 161 aa10.98□□□□□ -0.65
SCARB2-221ENST00000640341 NEXN-AS1Q8NBZ9 246 aa10.98□□□□□ -0.65
SCARB2-221ENST00000640341 PGPEP1Q9NXJ5 209 aa10.98□□□□□ -0.65
SCARB2-221ENST00000640341 SOCS3O14543 225 aa10.97□□□□□ -0.65
SCARB2-221ENST00000640341 OPRPNQ99935 248 aaPredicted RBP10.97□□□□□ -0.65
SCARB2-221ENST00000640341 AVPP01185 164 aa10.97□□□□□ -0.65
SCARB2-221ENST00000640341 LGALS1P09382 135 aaKnown RBP10.97□□□□□ -0.65
SCARB2-221ENST00000640341 NACAE9PAV3 2078 aa10.97□□□□□ -0.65
SCARB2-221ENST00000640341 LENEPQ9Y5L5 61 aa10.96□□□□□ -0.65
SCARB2-221ENST00000640341 SPINK13Q1W4C9 94 aa10.96□□□□□ -0.66
SCARB2-221ENST00000640341 FOXI2Q6ZQN5 318 aa10.96□□□□□ -0.66
SCARB2-221ENST00000640341 C20orf78Q9BR46 151 aa10.96□□□□□ -0.66
SCARB2-221ENST00000640341 IGHV3-73A0A0B4J1V6 119 aa10.96□□□□□ -0.66
SCARB2-221ENST00000640341 C11orf86A6NJI1 115 aa10.96□□□□□ -0.66
SCARB2-221ENST00000640341 IGHG2P01859 326 aa10.96□□□□□ -0.66
SCARB2-221ENST00000640341 SMAGPQ0VAQ4 97 aa10.96□□□□□ -0.66
SCARB2-221ENST00000640341 SUMO4Q6EEV6 95 aa10.96□□□□□ -0.66
SCARB2-221ENST00000640341 USMG5Q96IX5 58 aa10.96□□□□□ -0.66
SCARB2-221ENST00000640341 KIR2DL4Q99706 377 aa10.96□□□□□ -0.66
SCARB2-221ENST00000640341 MDFICQ9P1T7 246 aa10.96□□□□□ -0.66
SCARB2-221ENST00000640341 LINC01549A6NIU2 74 aa10.95□□□□□ -0.66
SCARB2-221ENST00000640341 HOXA3O43365 443 aaPredicted RBP10.95□□□□□ -0.66
SCARB2-221ENST00000640341 SDHAF1A6NFY7 115 aa10.95□□□□□ -0.66
SCARB2-221ENST00000640341 E9PLD3 99 aa10.95□□□□□ -0.66
SCARB2-221ENST00000640341 ZNF418Q8TF45 676 aaPredicted RBP10.95□□□□□ -0.66
SCARB2-221ENST00000640341 USP24Q9UPU5 2620 aa10.95□□□□□ -0.66
SCARB2-221ENST00000640341 DOPEY1Q5JWR5 2465 aa10.94□□□□□ -0.66
SCARB2-221ENST00000640341 A0A1B0GWB2 263 aa10.94□□□□□ -0.66
SCARB2-221ENST00000640341 IGHV4-59P01825 116 aa10.94□□□□□ -0.66
SCARB2-221ENST00000640341 NAV2Q8IVL1 2488 aa10.94□□□□□ -0.66
SCARB2-221ENST00000640341 ANKRD17O75179 2603 aaKnown RBP10.94□□□□□ -0.66
SCARB2-221ENST00000640341 TRAV12-1A0A0B4J245 112 aa10.94□□□□□ -0.66
SCARB2-221ENST00000640341 C19orf54Q5BKX5 351 aa10.94□□□□□ -0.66
SCARB2-221ENST00000640341 TSSC4Q9Y5U2 329 aaPredicted RBP10.94□□□□□ -0.66
SCARB2-221ENST00000640341 INSL3P51460 131 aa10.93□□□□□ -0.66
SCARB2-221ENST00000640341 GAGE13Q4V321 117 aa10.93□□□□□ -0.66
SCARB2-221ENST00000640341 HIST2H2BDQ6DRA6 164 aa10.93□□□□□ -0.66
SCARB2-221ENST00000640341 TRBV7-3A0A075B6L6 115 aa10.93□□□□□ -0.66
SCARB2-221ENST00000640341 PRSS47A8MTI9 375 aa10.93□□□□□ -0.66
SCARB2-221ENST00000640341 RNF223E7ERA6 249 aa10.93□□□□□ -0.66
SCARB2-221ENST00000640341 H7C2G1 150 aa10.93□□□□□ -0.66
SCARB2-221ENST00000640341 MSMBP08118 114 aa10.93□□□□□ -0.66
SCARB2-221ENST00000640341 ID1P41134 155 aa10.93□□□□□ -0.66
SCARB2-221ENST00000640341 SYNJ2BPP57105 145 aa10.93□□□□□ -0.66
SCARB2-221ENST00000640341 RRN3P1Q2M238 152 aa10.93□□□□□ -0.66
SCARB2-221ENST00000640341 ZFP2Q6ZN57 461 aa10.93□□□□□ -0.66
SCARB2-221ENST00000640341 PSMB2P49721 201 aa10.93□□□□□ -0.66
SCARB2-221ENST00000640341 PRM2P04554 102 aa10.92□□□□□ -0.66
SCARB2-221ENST00000640341 A6NDX4 124 aa10.92□□□□□ -0.66
SCARB2-221ENST00000640341 SAMD13Q5VXD3 122 aa10.92□□□□□ -0.66
SCARB2-221ENST00000640341 C10orf105Q8TEF2 133 aa10.92□□□□□ -0.66
SCARB2-221ENST00000640341 TSHBP01222 138 aa10.91□□□□□ -0.66
SCARB2-221ENST00000640341 CRYGDP07320 174 aa10.91□□□□□ -0.66
SCARB2-221ENST00000640341 CHD6Q8TD26 2715 aa10.91□□□□□ -0.66
SCARB2-221ENST00000640341 KLK9Q2XQG4 91 aa10.91□□□□□ -0.66
SCARB2-221ENST00000640341 MXRA5Q9NR99 2828 aa10.91□□□□□ -0.66
SCARB2-221ENST00000640341 Q8N1Y9 231 aa10.9□□□□□ -0.66
SCARB2-221ENST00000640341 HERVK_113P61574 105 aa10.9□□□□□ -0.67
SCARB2-221ENST00000640341 TAL2Q16559 108 aa10.9□□□□□ -0.67
SCARB2-221ENST00000640341 VCYO14598 125 aa10.89□□□□□ -0.67
SCARB2-221ENST00000640341 DEFB112Q30KQ8 113 aa10.89□□□□□ -0.67
SCARB2-221ENST00000640341 KNCNA6PVL3 124 aa10.89□□□□□ -0.67
SCARB2-221ENST00000640341 PRB1P04280 392 aa10.89□□□□□ -0.67
SCARB2-221ENST00000640341 LINC00315P59091 139 aa10.89□□□□□ -0.67
SCARB2-221ENST00000640341 PMVKQ15126 192 aa10.89□□□□□ -0.67
SCARB2-221ENST00000640341 RNASE13Q5GAN3 156 aaKnown RBP10.89□□□□□ -0.67
SCARB2-221ENST00000640341 DCANP1Q8TF63 244 aa10.89□□□□□ -0.67
SCARB2-221ENST00000640341 SPANXB1Q9NS25 103 aaPredicted RBP10.89□□□□□ -0.67
SCARB2-221ENST00000640341 F8W1H4 67 aa10.89□□□□□ -0.67
SCARB2-221ENST00000640341 SCGB1C2P0DMR2 95 aa10.89□□□□□ -0.67
SCARB2-221ENST00000640341 AZU1P20160 251 aa10.89□□□□□ -0.67
SCARB2-221ENST00000640341 SNRPD3P62318 126 aaKnown RBP10.89□□□□□ -0.67
SCARB2-221ENST00000640341 ZNF876PQ49A33 203 aa10.89□□□□□ -0.67
SCARB2-221ENST00000640341 MORN3Q6PF18 240 aaPredicted RBP10.89□□□□□ -0.67
SCARB2-221ENST00000640341 PTH2Q96A98 100 aa10.89□□□□□ -0.67
SCARB2-221ENST00000640341 PPP1R17O96001 155 aa10.88□□□□□ -0.67
SCARB2-221ENST00000640341 TSPEAR-AS2P59090 65 aa10.88□□□□□ -0.67
SCARB2-221ENST00000640341 KHDC1LQ5JSQ8 128 aa10.88□□□□□ -0.67
SCARB2-221ENST00000640341 Q5PR19 223 aa10.88□□□□□ -0.67
SCARB2-221ENST00000640341 SPAG8Q99932 426 aaPredicted RBP10.88□□□□□ -0.67
SCARB2-221ENST00000640341 J3QR89 54 aa10.88□□□□□ -0.67
SCARB2-221ENST00000640341 TMEM238LA0A1B0GVL6 79 aa10.87□□□□□ -0.67
SCARB2-221ENST00000640341 A6NJY4 79 aa10.87□□□□□ -0.67
SCARB2-221ENST00000640341 ADARB2-AS1A8MUL3 147 aa10.87□□□□□ -0.67
SCARB2-221ENST00000640341 KLLNB2CW77 178 aa10.87□□□□□ -0.67
SCARB2-221ENST00000640341 DEFB136Q30KP8 78 aa10.87□□□□□ -0.67
SCARB2-221ENST00000640341 RAX2Q96IS3 184 aa10.87□□□□□ -0.67
SCARB2-221ENST00000640341 KIF25-AS1Q9Y6Z4 181 aa10.87□□□□□ -0.67
SCARB2-221ENST00000640341 IGLV4-69A0A075B6H9 119 aa10.87□□□□□ -0.67
SCARB2-221ENST00000640341 P0DMU3 169 aa10.87□□□□□ -0.67
SCARB2-221ENST00000640341 FAM231AP0DMU4 169 aa10.87□□□□□ -0.67
SCARB2-221ENST00000640341 FAM231CP0DMU5 169 aa10.87□□□□□ -0.67
SCARB2-221ENST00000640341 ZNRF2Q8NHG8 242 aa10.87□□□□□ -0.67
SCARB2-221ENST00000640341 FAM19A4Q96LR4 140 aa10.87□□□□□ -0.67
SCARB2-221ENST00000640341 DUX3Q96PT4 197 aa10.87□□□□□ -0.67
SCARB2-221ENST00000640341 IGLV1-40P01703 118 aa10.86□□□□□ -0.67
SCARB2-221ENST00000640341 LGALS3P17931 250 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms