RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 OR11H4Q8NGC9 324 aa11.13□□□□□ -0.63
SMN2-216ENST00000638794 AKR1C8PQ5T2L2 129 aa11.12□□□□□ -0.63
SMN2-216ENST00000638794 FAM162BQ5T6X4 162 aa11.12□□□□□ -0.63
SMN2-216ENST00000638794 BAALCQ8WXS3 180 aa11.12□□□□□ -0.63
SMN2-216ENST00000638794 DNAJC30Q96LL9 226 aa11.12□□□□□ -0.63
SMN2-216ENST00000638794 A0A087WWL8 130 aa11.11□□□□□ -0.63
SMN2-216ENST00000638794 NIT1Q86X76 327 aa11.11□□□□□ -0.63
SMN2-216ENST00000638794 SFRP2Q96HF1 295 aa11.11□□□□□ -0.63
SMN2-216ENST00000638794 FMC1Q96HJ9 113 aa11.11□□□□□ -0.63
SMN2-216ENST00000638794 ZFP30Q9Y2G7 519 aa11.11□□□□□ -0.63
SMN2-216ENST00000638794 PHLDA3Q9Y5J5 127 aa11.11□□□□□ -0.63
SMN2-216ENST00000638794 URGCP-MRPS24S4R325 110 aa11.11□□□□□ -0.63
SMN2-216ENST00000638794 TMSB15BA0A087X1C1 80 aa11.1□□□□□ -0.63
SMN2-216ENST00000638794 MAP1LC3B2A6NCE7 125 aa11.1□□□□□ -0.63
SMN2-216ENST00000638794 G3V3Q6 166 aa11.1□□□□□ -0.63
SMN2-216ENST00000638794 M0R381 172 aa11.1□□□□□ -0.63
SMN2-216ENST00000638794 UBE2G1P62253 170 aa11.1□□□□□ -0.63
SMN2-216ENST00000638794 ZNF674Q2M3X9 581 aa11.1□□□□□ -0.63
SMN2-216ENST00000638794 LINC01559Q495D7 138 aa11.1□□□□□ -0.63
SMN2-216ENST00000638794 MAP1LC3BQ9GZQ8 125 aa11.1□□□□□ -0.63
SMN2-216ENST00000638794 BATF3Q9NR55 127 aa11.1□□□□□ -0.63
SMN2-216ENST00000638794 COX11Q9Y6N1 276 aa11.1□□□□□ -0.63
SMN2-216ENST00000638794 TPT1P13693 172 aaKnown RBP11.09□□□□□ -0.63
SMN2-216ENST00000638794 LINC01620Q4KN68 170 aa11.09□□□□□ -0.63
SMN2-216ENST00000638794 LINC00528Q8N1L1 170 aa11.09□□□□□ -0.63
SMN2-216ENST00000638794 RMI2Q96E14 147 aa11.09□□□□□ -0.63
SMN2-216ENST00000638794 KLK12Q9UKR0 248 aa11.09□□□□□ -0.63
SMN2-216ENST00000638794 IGKV2D-24A0A075B6R9 120 aa11.08□□□□□ -0.64
SMN2-216ENST00000638794 LTAP01374 205 aa11.08□□□□□ -0.64
SMN2-216ENST00000638794 CYTL1Q9NRR1 136 aa11.08□□□□□ -0.64
SMN2-216ENST00000638794 TRBV6-1A0A0K0K1D8 114 aa11.07□□□□□ -0.64
SMN2-216ENST00000638794 PLA2G1BP04054 148 aaKnown RBP11.07□□□□□ -0.64
SMN2-216ENST00000638794 CST9LP1Q5W188 147 aa11.07□□□□□ -0.64
SMN2-216ENST00000638794 ZFP82Q8N141 532 aa11.07□□□□□ -0.64
SMN2-216ENST00000638794 UBE2WQ96B02 151 aa11.07□□□□□ -0.64
SMN2-216ENST00000638794 TCEAL7Q9BRU2 100 aa11.07□□□□□ -0.64
SMN2-216ENST00000638794 A0A087WX48 190 aa11.06□□□□□ -0.64
SMN2-216ENST00000638794 TRBV10-1A0A0K0K1A3 114 aa11.06□□□□□ -0.64
SMN2-216ENST00000638794 J3QL48 77 aa11.06□□□□□ -0.64
SMN2-216ENST00000638794 ARPC5O15511 151 aa11.06□□□□□ -0.64
SMN2-216ENST00000638794 SEC11BP0C7V7 166 aa11.06□□□□□ -0.64
SMN2-216ENST00000638794 FHITP49789 147 aa11.06□□□□□ -0.64
SMN2-216ENST00000638794 UBE2D3P61077 147 aa11.06□□□□□ -0.64
SMN2-216ENST00000638794 UBE2D2P62837 147 aa11.06□□□□□ -0.64
SMN2-216ENST00000638794 SCXQ7RTU7 201 aa11.06□□□□□ -0.64
SMN2-216ENST00000638794 Q8N976 141 aa11.06□□□□□ -0.64
SMN2-216ENST00000638794 CHCHD7Q9BUK0 85 aa11.06□□□□□ -0.64
SMN2-216ENST00000638794 LRP1Q07954 4544 aaKnown RBP11.05□□□□□ -0.64
SMN2-216ENST00000638794 RBFOX3A6NFN3 312 aa11.05□□□□□ -0.64
SMN2-216ENST00000638794 AKR1C3P42330 323 aa11.05□□□□□ -0.64
SMN2-216ENST00000638794 RPL36AP83881 106 aaKnown RBP11.05□□□□□ -0.64
SMN2-216ENST00000638794 RPL36ALQ969Q0 106 aaKnown RBP11.05□□□□□ -0.64
SMN2-216ENST00000638794 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
SMN2-216ENST00000638794 KCNIP4Q6PIL6 250 aa11.04□□□□□ -0.64
SMN2-216ENST00000638794 STOML3Q8TAV4 291 aa11.04□□□□□ -0.64
SMN2-216ENST00000638794 PAGE4O60829 102 aa11.03□□□□□ -0.64
SMN2-216ENST00000638794 RPL19P84098 196 aaKnown RBP11.03□□□□□ -0.64
SMN2-216ENST00000638794 ELOBQ15370 118 aa11.03□□□□□ -0.64
SMN2-216ENST00000638794 ATRAIDQ6UW56 229 aa11.03□□□□□ -0.64
SMN2-216ENST00000638794 OR10G8Q8NGN5 311 aa11.03□□□□□ -0.64
SMN2-216ENST00000638794 OR10AG1Q8NH19 301 aa11.02□□□□□ -0.65
SMN2-216ENST00000638794 FAT3Q8TDW7 4589 aa11.01□□□□□ -0.65
SMN2-216ENST00000638794 TRBV6-8A0A0A6YYG3 113 aa11.01□□□□□ -0.65
SMN2-216ENST00000638794 TMEM262E9PQX1 116 aa11.01□□□□□ -0.65
SMN2-216ENST00000638794 RAB4BP61018 213 aa11.01□□□□□ -0.65
SMN2-216ENST00000638794 Q0VG73 95 aa11.01□□□□□ -0.65
SMN2-216ENST00000638794 ZNF56Q15929 161 aa11.01□□□□□ -0.65
SMN2-216ENST00000638794 NEXN-AS1Q8NBZ9 246 aa11.01□□□□□ -0.65
SMN2-216ENST00000638794 DEFB104AQ8WTQ1 72 aa11.01□□□□□ -0.65
SMN2-216ENST00000638794 CHAC1Q9BUX1 264 aa11.01□□□□□ -0.65
SMN2-216ENST00000638794 SCO2A0A1W2PP80 73 aa11□□□□□ -0.65
SMN2-216ENST00000638794 SMLR1H3BR10 107 aa11□□□□□ -0.65
SMN2-216ENST00000638794 A0A1B0GV50 99 aa10.99□□□□□ -0.65
SMN2-216ENST00000638794 KRTAP29-1A8MX34 341 aaPredicted RBP10.99□□□□□ -0.65
SMN2-216ENST00000638794 CXCL1P09341 107 aa10.99□□□□□ -0.65
SMN2-216ENST00000638794 MPV17L2Q567V2 206 aa10.99□□□□□ -0.65
SMN2-216ENST00000638794 PRR27Q6MZM9 219 aa10.99□□□□□ -0.65
SMN2-216ENST00000638794 ENHOQ6UWT2 76 aa10.99□□□□□ -0.65
SMN2-216ENST00000638794 C15orf54Q8N8G6 183 aa10.99□□□□□ -0.65
SMN2-216ENST00000638794 FAM213BQ8TBF2 198 aa10.99□□□□□ -0.65
SMN2-216ENST00000638794 CIRBP-AS1Q8TBR5 109 aa10.99□□□□□ -0.65
SMN2-216ENST00000638794 SFT2D1Q8WV19 159 aa10.99□□□□□ -0.65
SMN2-216ENST00000638794 MLST8Q9BVC4 326 aa10.99□□□□□ -0.65
SMN2-216ENST00000638794 C1orf43Q9BWL3 253 aa10.99□□□□□ -0.65
SMN2-216ENST00000638794 ZNF471Q9BX82 626 aaPredicted RBP10.99□□□□□ -0.65
SMN2-216ENST00000638794 MUC21A0A0G2JKD1 596 aa10.98□□□□□ -0.65
SMN2-216ENST00000638794 MUC21A0A140T8X8 626 aa10.98□□□□□ -0.65
SMN2-216ENST00000638794 CRPP02741 224 aa10.98□□□□□ -0.65
SMN2-216ENST00000638794 S100A9P06702 114 aaKnown RBP10.98□□□□□ -0.65
SMN2-216ENST00000638794 MBD3L1Q8WWY6 194 aa10.98□□□□□ -0.65
SMN2-216ENST00000638794 SSBP4Q9BWG4 385 aaPredicted RBP10.98□□□□□ -0.65
SMN2-216ENST00000638794 SNAI2O43623 268 aa10.97□□□□□ -0.65
SMN2-216ENST00000638794 KRTAP10-4P60372 401 aaPredicted RBP10.97□□□□□ -0.65
SMN2-216ENST00000638794 ZNF345Q14585 488 aa10.97□□□□□ -0.65
SMN2-216ENST00000638794 RGS21Q2M5E4 152 aa10.97□□□□□ -0.65
SMN2-216ENST00000638794 BAGE2Q86Y30 109 aa10.97□□□□□ -0.65
SMN2-216ENST00000638794 KCNRGQ8N5I3 272 aa10.97□□□□□ -0.65
SMN2-216ENST00000638794 PKHD1L1Q86WI1 4243 aa10.96□□□□□ -0.65
SMN2-216ENST00000638794 UMAD1C9J7I0 102 aa10.96□□□□□ -0.65
SMN2-216ENST00000638794 PFDN1O60925 122 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 1260.7 ms