RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 SPATA12Q7Z6I5 190 aa14.24□□□□□ -0.13
SCARB2-213ENST00000638680 C16orf74Q96GX8 76 aa14.24□□□□□ -0.13
SCARB2-213ENST00000638680 LOXL1Q08397 574 aaPredicted RBP14.23□□□□□ -0.13
SCARB2-213ENST00000638680 C5orf56Q8N8D9 126 aa14.23□□□□□ -0.13
SCARB2-213ENST00000638680 IGHV4-28A0A0C4DH34 117 aa14.23□□□□□ -0.13
SCARB2-213ENST00000638680 PTH2Q96A98 100 aa14.23□□□□□ -0.13
SCARB2-213ENST00000638680 IGHV4-61A0A0C4DH41 118 aa14.23□□□□□ -0.13
SCARB2-213ENST00000638680 NOTCH4Q99466 2003 aa14.23□□□□□ -0.13
SCARB2-213ENST00000638680 CHD3Q12873 2000 aaKnown RBP14.23□□□□□ -0.13
SCARB2-213ENST00000638680 IGFL2Q6UWQ7 119 aa14.23□□□□□ -0.13
SCARB2-213ENST00000638680 PIP4P1Q86T03 277 aa14.22□□□□□ -0.13
SCARB2-213ENST00000638680 ATP6V0E2Q8NHE4 81 aa14.22□□□□□ -0.13
SCARB2-213ENST00000638680 OPRPNQ99935 248 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-213ENST00000638680 PSMB8P28062 276 aa14.21□□□□□ -0.13
SCARB2-213ENST00000638680 RPL18AQ02543 176 aaKnown RBP14.21□□□□□ -0.13
SCARB2-213ENST00000638680 COX7A2LO14548 114 aa14.21□□□□□ -0.13
SCARB2-213ENST00000638680 UBE2BP63146 152 aa14.21□□□□□ -0.13
SCARB2-213ENST00000638680 Q9HAA7 133 aa14.21□□□□□ -0.13
SCARB2-213ENST00000638680 FUSP35637 526 aaKnown RBP eCLIP14.21□□□□□ -0.14
SCARB2-213ENST00000638680 NCR3O14931 201 aa14.2□□□□□ -0.14
SCARB2-213ENST00000638680 MED14OSP0DP75 135 aa14.2□□□□□ -0.14
SCARB2-213ENST00000638680 A0A1B0GXF2 115 aa14.2□□□□□ -0.14
SCARB2-213ENST00000638680 TMEM61Q8N0U2 210 aa14.2□□□□□ -0.14
SCARB2-213ENST00000638680 COL4A3Q01955 1670 aa14.2□□□□□ -0.14
SCARB2-213ENST00000638680 NCKAP5O14513 1909 aa14.2□□□□□ -0.14
SCARB2-213ENST00000638680 CAMK2N2Q96S95 79 aa14.2□□□□□ -0.14
SCARB2-213ENST00000638680 IGLV2-8P01709 118 aa14.19□□□□□ -0.14
SCARB2-213ENST00000638680 LECT2O14960 151 aa14.19□□□□□ -0.14
SCARB2-213ENST00000638680 C5orf47Q569G3 176 aa14.19□□□□□ -0.14
SCARB2-213ENST00000638680 CACNA1BQ00975 2339 aa14.19□□□□□ -0.14
SCARB2-213ENST00000638680 IGHV4OR15-8A0A075B7B6 117 aa14.19□□□□□ -0.14
SCARB2-213ENST00000638680 A0A087WW49 117 aa14.19□□□□□ -0.14
SCARB2-213ENST00000638680 GDF5OSQ5U4N7 250 aa14.19□□□□□ -0.14
SCARB2-213ENST00000638680 VSIG2Q96IQ7 327 aa14.19□□□□□ -0.14
SCARB2-213ENST00000638680 IGLV1-47P01700 117 aa14.19□□□□□ -0.14
SCARB2-213ENST00000638680 NUP210Q8TEM1 1887 aaPredicted RBP14.19□□□□□ -0.14
SCARB2-213ENST00000638680 IGKV1D-37A0A075B6S9 117 aa14.19□□□□□ -0.14
SCARB2-213ENST00000638680 ETDCA0A1B0GVM5 59 aa14.19□□□□□ -0.14
SCARB2-213ENST00000638680 LINC00322Q6ZN03 302 aaPredicted RBP14.19□□□□□ -0.14
SCARB2-213ENST00000638680 NDUFA11Q86Y39 141 aa14.19□□□□□ -0.14
SCARB2-213ENST00000638680 Q8N7P7 452 aa14.18□□□□□ -0.14
SCARB2-213ENST00000638680 MALRD1Q5VYJ5 2156 aa14.18□□□□□ -0.14
SCARB2-213ENST00000638680 TNRC6AQ8NDV7 1962 aaKnown RBP14.18□□□□□ -0.14
SCARB2-213ENST00000638680 TRBV7-3A0A075B6L6 115 aa14.18□□□□□ -0.14
SCARB2-213ENST00000638680 P0C879 139 aa14.18□□□□□ -0.14
SCARB2-213ENST00000638680 SHANK1Q9Y566 2161 aa14.18□□□□□ -0.14
SCARB2-213ENST00000638680 J3KT08 172 aa14.18□□□□□ -0.14
SCARB2-213ENST00000638680 PRB2P02812 416 aaPredicted RBP14.18□□□□□ -0.14
SCARB2-213ENST00000638680 CGB7P0DN87 165 aa14.18□□□□□ -0.14
SCARB2-213ENST00000638680 IGHV4-30-2A0A087WSY4 118 aa14.18□□□□□ -0.14
SCARB2-213ENST00000638680 C1orf43Q9BWL3 253 aa14.18□□□□□ -0.14
SCARB2-213ENST00000638680 PIFOQ8TCI5 191 aa14.17□□□□□ -0.14
SCARB2-213ENST00000638680 H3BT86 120 aa14.17□□□□□ -0.14
SCARB2-213ENST00000638680 GPR179Q6PRD1 2367 aa14.17□□□□□ -0.14
SCARB2-213ENST00000638680 IGHV1-58A0A0C4DH39 117 aa14.17□□□□□ -0.14
SCARB2-213ENST00000638680 TCL1BO95988 128 aa14.17□□□□□ -0.14
SCARB2-213ENST00000638680 IGHV3-30P01768 117 aa14.17□□□□□ -0.14
SCARB2-213ENST00000638680 IGHV3-33P01772 117 aa14.17□□□□□ -0.14
SCARB2-213ENST00000638680 IGHV3-30-3P0DP02 117 aa14.17□□□□□ -0.14
SCARB2-213ENST00000638680 IGHV3-30-5P0DP03 117 aa14.17□□□□□ -0.14
SCARB2-213ENST00000638680 CACNA1GO43497 2377 aa14.16□□□□□ -0.14
SCARB2-213ENST00000638680 TRAV26-1A0A087WT03 109 aa14.16□□□□□ -0.14
SCARB2-213ENST00000638680 DENND4AQ7Z401 1863 aa14.16□□□□□ -0.14
SCARB2-213ENST00000638680 NFE4Q86UQ8 179 aa14.15□□□□□ -0.14
SCARB2-213ENST00000638680 ESM1Q9NQ30 184 aa14.15□□□□□ -0.14
SCARB2-213ENST00000638680 MDFICQ9P1T7 246 aa14.15□□□□□ -0.14
SCARB2-213ENST00000638680 OBSL1O75147 1896 aa14.15□□□□□ -0.14
SCARB2-213ENST00000638680 ZNF80P51504 273 aaPredicted RBP14.15□□□□□ -0.14
SCARB2-213ENST00000638680 SPTAN1Q13813 2472 aaKnown RBP14.15□□□□□ -0.14
SCARB2-213ENST00000638680 ZFP36P26651 326 aaKnown RBP14.15□□□□□ -0.14
SCARB2-213ENST00000638680 Q6ZPA2 131 aa14.15□□□□□ -0.14
SCARB2-213ENST00000638680 TP73-AS1Q9UF72 201 aa14.15□□□□□ -0.14
SCARB2-213ENST00000638680 CRYGBP07316 175 aa14.15□□□□□ -0.14
SCARB2-213ENST00000638680 NREPQ16612 68 aa14.14□□□□□ -0.15
SCARB2-213ENST00000638680 MSMPQ1L6U9 139 aa14.14□□□□□ -0.15
SCARB2-213ENST00000638680 SEM1Q6ZVN7 128 aa14.14□□□□□ -0.15
SCARB2-213ENST00000638680 ZNF295-AS1Q8N0V1 137 aa14.14□□□□□ -0.15
SCARB2-213ENST00000638680 K7EMT4 169 aa14.13□□□□□ -0.15
SCARB2-213ENST00000638680 MRPL23Q16540 153 aaKnown RBP14.13□□□□□ -0.15
SCARB2-213ENST00000638680 C20orf203Q8NBC4 194 aa14.13□□□□□ -0.15
SCARB2-213ENST00000638680 DYSFO75923 2080 aa14.13□□□□□ -0.15
SCARB2-213ENST00000638680 MIR7-3HGQ8N6C7 128 aa14.13□□□□□ -0.15
SCARB2-213ENST00000638680 MED13Q9UHV7 2174 aa14.13□□□□□ -0.15
SCARB2-213ENST00000638680 WFDC9Q8NEX5 89 aa14.13□□□□□ -0.15
SCARB2-213ENST00000638680 FANCD2OSQ96PS1 177 aa14.13□□□□□ -0.15
SCARB2-213ENST00000638680 BRWD1-AS2P59051 145 aa14.13□□□□□ -0.15
SCARB2-213ENST00000638680 UNQ9165/PRO28630Q6UXU0 137 aa14.13□□□□□ -0.15
SCARB2-213ENST00000638680 JMJD7-PLA2G4BH0Y9G9 81 aa14.12□□□□□ -0.15
SCARB2-213ENST00000638680 CEMP1Q6PRD7 247 aaPredicted RBP14.12□□□□□ -0.15
SCARB2-213ENST00000638680 TRBV12-3P01733 135 aa14.12□□□□□ -0.15
SCARB2-213ENST00000638680 GTF3C1Q12789 2109 aa14.12□□□□□ -0.15
SCARB2-213ENST00000638680 NOTCH3Q9UM47 2321 aa14.11□□□□□ -0.15
SCARB2-213ENST00000638680 ATP5G1P05496 136 aa14.11□□□□□ -0.15
SCARB2-213ENST00000638680 ARHGAP21Q5T5U3 1957 aa14.11□□□□□ -0.15
SCARB2-213ENST00000638680 HHLA3Q9XRX5 114 aa14.11□□□□□ -0.15
SCARB2-213ENST00000638680 GPHB5Q86YW7 130 aa14.1□□□□□ -0.15
SCARB2-213ENST00000638680 Q6ZUT4 128 aa14.1□□□□□ -0.15
SCARB2-213ENST00000638680 MIAQ16674 131 aa14.09□□□□□ -0.15
SCARB2-213ENST00000638680 TNRC6BQ9UPQ9 1833 aaKnown RBP14.09□□□□□ -0.15
SCARB2-213ENST00000638680 RNF183Q96D59 192 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms