RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 IGHV1OR15-1A0A075B7D0 117 aa11.3□□□□□ -0.6
SCN8A-214ENST00000637709 SMIM17P0DL12 118 aa11.3□□□□□ -0.6
SCN8A-214ENST00000637709 FCER1GP30273 86 aa11.3□□□□□ -0.6
SCN8A-214ENST00000637709 WFDC10AQ9H1F0 79 aa11.3□□□□□ -0.6
SCN8A-214ENST00000637709 IGHV3OR16-12A0A075B7B8 117 aa11.3□□□□□ -0.6
SCN8A-214ENST00000637709 HSBP1L1C9JCN9 74 aa11.3□□□□□ -0.6
SCN8A-214ENST00000637709 H3BMM0 161 aa11.3□□□□□ -0.6
SCN8A-214ENST00000637709 LY6G6DO95868 133 aa11.3□□□□□ -0.6
SCN8A-214ENST00000637709 NUDT3O95989 172 aa11.3□□□□□ -0.6
SCN8A-214ENST00000637709 SUMO2P61956 95 aaKnown RBP11.3□□□□□ -0.6
SCN8A-214ENST00000637709 C2orf88Q9BSF0 95 aa11.3□□□□□ -0.6
SCN8A-214ENST00000637709 LINC00315P59091 139 aa11.29□□□□□ -0.6
SCN8A-214ENST00000637709 LAGE3Q14657 143 aa11.29□□□□□ -0.6
SCN8A-214ENST00000637709 SAMD13Q5VXD3 122 aa11.29□□□□□ -0.6
SCN8A-214ENST00000637709 SMIM2Q9BVW6 85 aa11.29□□□□□ -0.6
SCN8A-214ENST00000637709 TRBV7-9A0A0J9YWB2 115 aa11.29□□□□□ -0.6
SCN8A-214ENST00000637709 SUMO4Q6EEV6 95 aa11.29□□□□□ -0.6
SCN8A-214ENST00000637709 LAMTOR2Q9Y2Q5 125 aa11.29□□□□□ -0.6
SCN8A-214ENST00000637709 KIF25-AS1Q9Y6Z4 181 aa11.29□□□□□ -0.6
SCN8A-214ENST00000637709 ZNF876PQ49A33 203 aa11.28□□□□□ -0.6
SCN8A-214ENST00000637709 TTTY13Q9BZ97 58 aa11.28□□□□□ -0.6
SCN8A-214ENST00000637709 XCL2Q9UBD3 114 aa11.28□□□□□ -0.6
SCN8A-214ENST00000637709 HLA-DRB4P13762 266 aa11.28□□□□□ -0.6
SCN8A-214ENST00000637709 PROK1P58294 105 aa11.28□□□□□ -0.6
SCN8A-214ENST00000637709 ZNF56Q15929 161 aa11.28□□□□□ -0.6
SCN8A-214ENST00000637709 MRAP2Q96G30 205 aa11.28□□□□□ -0.6
SCN8A-214ENST00000637709 CSTL1Q9H114 145 aa11.28□□□□□ -0.6
SCN8A-214ENST00000637709 ZNF256Q9Y2P7 627 aaPredicted RBP11.28□□□□□ -0.6
SCN8A-214ENST00000637709 HLA-DRB4X5D2U9 266 aa11.28□□□□□ -0.6
SCN8A-214ENST00000637709 DUSP14O95147 198 aaKnown RBP11.27□□□□□ -0.61
SCN8A-214ENST00000637709 RNASE1P07998 156 aaKnown RBP11.27□□□□□ -0.61
SCN8A-214ENST00000637709 G0S2P27469 103 aa11.27□□□□□ -0.61
SCN8A-214ENST00000637709 ODF3L2Q3SX64 289 aa11.27□□□□□ -0.61
SCN8A-214ENST00000637709 INAFM1C9JVW0 142 aa11.26□□□□□ -0.61
SCN8A-214ENST00000637709 C9orf85Q96MD7 179 aa11.26□□□□□ -0.61
SCN8A-214ENST00000637709 Q9UF83 564 aa11.26□□□□□ -0.61
SCN8A-214ENST00000637709 TEP1Q99973 2627 aaKnown RBP11.26□□□□□ -0.61
SCN8A-214ENST00000637709 SAP30O75446 220 aa11.26□□□□□ -0.61
SCN8A-214ENST00000637709 P0DMU3 169 aa11.26□□□□□ -0.61
SCN8A-214ENST00000637709 FAM231AP0DMU4 169 aa11.26□□□□□ -0.61
SCN8A-214ENST00000637709 FAM231CP0DMU5 169 aa11.26□□□□□ -0.61
SCN8A-214ENST00000637709 NMUP48645 174 aa11.26□□□□□ -0.61
SCN8A-214ENST00000637709 ZC2HC1BQ5TFG8 222 aa11.26□□□□□ -0.61
SCN8A-214ENST00000637709 ERASQ7Z444 233 aa11.26□□□□□ -0.61
SCN8A-214ENST00000637709 ZNF418Q8TF45 676 aaPredicted RBP11.25□□□□□ -0.61
SCN8A-214ENST00000637709 ST20Q9HBF5 79 aa11.25□□□□□ -0.61
SCN8A-214ENST00000637709 LINC01546A6NGU7 62 aa11.25□□□□□ -0.61
SCN8A-214ENST00000637709 NXPH4O95158 308 aa11.25□□□□□ -0.61
SCN8A-214ENST00000637709 MED14OSP0DP75 135 aa11.25□□□□□ -0.61
SCN8A-214ENST00000637709 NUTF2P61970 127 aaKnown RBP11.25□□□□□ -0.61
SCN8A-214ENST00000637709 FHL3Q13643 280 aa11.25□□□□□ -0.61
SCN8A-214ENST00000637709 ODF1Q14990 250 aa11.25□□□□□ -0.61
SCN8A-214ENST00000637709 MPV17L2Q567V2 206 aa11.25□□□□□ -0.61
SCN8A-214ENST00000637709 TEX29Q8N6K0 151 aa11.25□□□□□ -0.61
SCN8A-214ENST00000637709 TMEM160Q9NX00 188 aa11.25□□□□□ -0.61
SCN8A-214ENST00000637709 HILS1P60008 231 aa11.24□□□□□ -0.61
SCN8A-214ENST00000637709 KRTAP10-3P60369 221 aa11.24□□□□□ -0.61
SCN8A-214ENST00000637709 LGALS9BQ3B8N2 356 aa11.24□□□□□ -0.61
SCN8A-214ENST00000637709 LGALS9CQ6DKI2 356 aa11.24□□□□□ -0.61
SCN8A-214ENST00000637709 SLC25A34Q6PIV7 304 aa11.24□□□□□ -0.61
SCN8A-214ENST00000637709 PCP2Q8IVA1 136 aa11.24□□□□□ -0.61
SCN8A-214ENST00000637709 ODF3Q96PU9 254 aa11.24□□□□□ -0.61
SCN8A-214ENST00000637709 TSSC4Q9Y5U2 329 aaPredicted RBP11.24□□□□□ -0.61
SCN8A-214ENST00000637709 RPL39P62891 51 aaKnown RBP11.24□□□□□ -0.61
SCN8A-214ENST00000637709 IGKV2D-26A0A0A0MRZ7 120 aa11.23□□□□□ -0.61
SCN8A-214ENST00000637709 CRYGDP07320 174 aa11.23□□□□□ -0.61
SCN8A-214ENST00000637709 LINC01587Q99440 93 aa11.23□□□□□ -0.61
SCN8A-214ENST00000637709 MRPL35Q9NZE8 188 aaKnown RBP11.23□□□□□ -0.61
SCN8A-214ENST00000637709 EMP1P54849 157 aa11.23□□□□□ -0.61
SCN8A-214ENST00000637709 GTSCR1Q86UQ5 136 aa11.23□□□□□ -0.61
SCN8A-214ENST00000637709 AZU1P20160 251 aa11.22□□□□□ -0.61
SCN8A-214ENST00000637709 MORN3Q6PF18 240 aaPredicted RBP11.22□□□□□ -0.61
SCN8A-214ENST00000637709 SDHAF1A6NFY7 115 aa11.21□□□□□ -0.61
SCN8A-214ENST00000637709 ADARB2-AS1A8MUL3 147 aa11.21□□□□□ -0.61
SCN8A-214ENST00000637709 C2orf66Q6UXQ4 117 aa11.21□□□□□ -0.61
SCN8A-214ENST00000637709 SPATA3Q8NHX4 192 aa11.21□□□□□ -0.61
SCN8A-214ENST00000637709 SCGB3A1Q96QR1 104 aa11.21□□□□□ -0.61
SCN8A-214ENST00000637709 MRPL16Q9NX20 251 aaKnown RBP11.21□□□□□ -0.61
SCN8A-214ENST00000637709 F8P00451 2351 aa11.21□□□□□ -0.62
SCN8A-214ENST00000637709 LBHQ53QV2 105 aaPredicted RBP11.2□□□□□ -0.62
SCN8A-214ENST00000637709 TMEM208Q9BTX3 173 aa11.2□□□□□ -0.62
SCN8A-214ENST00000637709 PRSS47A8MTI9 375 aa11.2□□□□□ -0.62
SCN8A-214ENST00000637709 STHQ8IWL8 128 aa11.2□□□□□ -0.62
SCN8A-214ENST00000637709 SPAG8Q99932 426 aaPredicted RBP11.2□□□□□ -0.62
SCN8A-214ENST00000637709 SYT8Q8NBV8 401 aa11.19□□□□□ -0.62
SCN8A-214ENST00000637709 C20orf78Q9BR46 151 aa11.19□□□□□ -0.62
SCN8A-214ENST00000637709 HHLA3Q9XRX5 114 aa11.19□□□□□ -0.62
SCN8A-214ENST00000637709 COX8AP10176 69 aa11.19□□□□□ -0.62
SCN8A-214ENST00000637709 RPL35AP18077 110 aaKnown RBP11.19□□□□□ -0.62
SCN8A-214ENST00000637709 Q6ZSN1 163 aa11.19□□□□□ -0.62
SCN8A-214ENST00000637709 C2orf91Q6ZV80 131 aa11.19□□□□□ -0.62
SCN8A-214ENST00000637709 OR11H12B2RN74 326 aa11.18□□□□□ -0.62
SCN8A-214ENST00000637709 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.18□□□□□ -0.62
SCN8A-214ENST00000637709 M0QY20 66 aa11.18□□□□□ -0.62
SCN8A-214ENST00000637709 FGF6P10767 208 aa11.18□□□□□ -0.62
SCN8A-214ENST00000637709 ZNF25P17030 456 aaPredicted RBP11.18□□□□□ -0.62
SCN8A-214ENST00000637709 OPRPNQ99935 248 aaPredicted RBP11.18□□□□□ -0.62
SCN8A-214ENST00000637709 TP53TG1Q9Y2A0 90 aa11.18□□□□□ -0.62
SCN8A-214ENST00000637709 MRPS16Q9Y3D3 137 aaKnown RBP11.18□□□□□ -0.62
SCN8A-214ENST00000637709 IGKCP01834 107 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms