RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 G3V4G9 280 aa11.09□□□□□ -0.63
CLN6-219ENST00000637329 ESDP10768 282 aa11.09□□□□□ -0.63
CLN6-219ENST00000637329 DAZ2Q13117 558 aaKnown RBP11.09□□□□□ -0.63
CLN6-219ENST00000637329 BAGE3Q86Y29 109 aa11.09□□□□□ -0.63
CLN6-219ENST00000637329 PRELID3AQ96N28 172 aa11.09□□□□□ -0.63
CLN6-219ENST00000637329 KIF25-AS1Q9Y6Z4 181 aa11.09□□□□□ -0.63
CLN6-219ENST00000637329 LOC105371267A0A1B0GV96 52 aa11.08□□□□□ -0.64
CLN6-219ENST00000637329 AZU1P20160 251 aa11.08□□□□□ -0.64
CLN6-219ENST00000637329 LGALS9BQ3B8N2 356 aa11.08□□□□□ -0.64
CLN6-219ENST00000637329 C14orf178Q8N769 122 aaPredicted RBP11.08□□□□□ -0.64
CLN6-219ENST00000637329 RHODO00212 210 aa11.07□□□□□ -0.64
CLN6-219ENST00000637329 SPRY2O43597 315 aa11.07□□□□□ -0.64
CLN6-219ENST00000637329 PPP1R17O96001 155 aa11.07□□□□□ -0.64
CLN6-219ENST00000637329 Q6ZWC4 215 aa11.07□□□□□ -0.64
CLN6-219ENST00000637329 HIST3H2BBQ8N257 126 aa11.07□□□□□ -0.64
CLN6-219ENST00000637329 RASL10AQ92737 203 aa11.07□□□□□ -0.64
CLN6-219ENST00000637329 NOTCH3Q9UM47 2321 aa11.07□□□□□ -0.64
CLN6-219ENST00000637329 PRKDCP78527 4128 aaKnown RBP11.06□□□□□ -0.64
CLN6-219ENST00000637329 SERF1AO75920 110 aa11.06□□□□□ -0.64
CLN6-219ENST00000637329 MGPP08493 103 aa11.06□□□□□ -0.64
CLN6-219ENST00000637329 LINC00315P59091 139 aa11.06□□□□□ -0.64
CLN6-219ENST00000637329 KPRPQ5T749 579 aaPredicted RBP11.06□□□□□ -0.64
CLN6-219ENST00000637329 EDA2RQ9HAV5 297 aa11.06□□□□□ -0.64
CLN6-219ENST00000637329 MUC4Q99102 2169 aa11.06□□□□□ -0.64
CLN6-219ENST00000637329 PLAC8L1A1L4L8 177 aa11.05□□□□□ -0.64
CLN6-219ENST00000637329 NCR2O95944 276 aa11.05□□□□□ -0.64
CLN6-219ENST00000637329 PRM2P04554 102 aa11.05□□□□□ -0.64
CLN6-219ENST00000637329 CRYGDP07320 174 aa11.05□□□□□ -0.64
CLN6-219ENST00000637329 S100A2P29034 98 aa11.05□□□□□ -0.64
CLN6-219ENST00000637329 LINC00310P59036 64 aa11.05□□□□□ -0.64
CLN6-219ENST00000637329 IQCJQ1A5X6 159 aa11.05□□□□□ -0.64
CLN6-219ENST00000637329 CHCHD1Q96BP2 118 aaKnown RBP11.05□□□□□ -0.64
CLN6-219ENST00000637329 OVOL2Q9BRP0 275 aa11.05□□□□□ -0.64
CLN6-219ENST00000637329 MAP1LC3AQ9H492 121 aa11.05□□□□□ -0.64
CLN6-219ENST00000637329 SMKR1H3BMG3 65 aa11.04□□□□□ -0.64
CLN6-219ENST00000637329 TNFRSF6BO95407 300 aa11.04□□□□□ -0.64
CLN6-219ENST00000637329 NPYP01303 97 aa11.04□□□□□ -0.64
CLN6-219ENST00000637329 DEFB135Q30KP9 77 aa11.04□□□□□ -0.64
CLN6-219ENST00000637329 ZFP2Q6ZN57 461 aa11.04□□□□□ -0.64
CLN6-219ENST00000637329 NRACQ8N912 160 aa11.04□□□□□ -0.64
CLN6-219ENST00000637329 PACRGQ96M98 296 aaPredicted RBP11.04□□□□□ -0.64
CLN6-219ENST00000637329 JPT2Q9H910 190 aa11.04□□□□□ -0.64
CLN6-219ENST00000637329 MRPL16Q9NX20 251 aaKnown RBP11.04□□□□□ -0.64
CLN6-219ENST00000637329 TP53TG1Q9Y2A0 90 aa11.04□□□□□ -0.64
CLN6-219ENST00000637329 X6R8D5 127 aa11.04□□□□□ -0.64
CLN6-219ENST00000637329 A0A087WWL8 130 aa11.03□□□□□ -0.64
CLN6-219ENST00000637329 PRSS47A8MTI9 375 aa11.03□□□□□ -0.64
CLN6-219ENST00000637329 RS1O15537 224 aa11.03□□□□□ -0.64
CLN6-219ENST00000637329 ZNF56Q15929 161 aa11.03□□□□□ -0.64
CLN6-219ENST00000637329 FAM74A4Q5TZK3 123 aa11.03□□□□□ -0.64
CLN6-219ENST00000637329 CFAP126Q5VTH2 177 aa11.03□□□□□ -0.64
CLN6-219ENST00000637329 UFSP1Q6NVU6 142 aa11.03□□□□□ -0.64
CLN6-219ENST00000637329 RNF183Q96D59 192 aa11.03□□□□□ -0.64
CLN6-219ENST00000637329 TRGV1A0A0A0MS02 117 aa11.02□□□□□ -0.65
CLN6-219ENST00000637329 TRAV26-2A0A0B4J265 109 aa11.02□□□□□ -0.65
CLN6-219ENST00000637329 H7C1H1 209 aa11.02□□□□□ -0.65
CLN6-219ENST00000637329 CIDEAO60543 219 aa11.02□□□□□ -0.65
CLN6-219ENST00000637329 MIFP14174 115 aa11.02□□□□□ -0.65
CLN6-219ENST00000637329 SUMO4Q6EEV6 95 aa11.02□□□□□ -0.65
CLN6-219ENST00000637329 RNASEKQ6P5S7 137 aaKnown RBP11.02□□□□□ -0.65
CLN6-219ENST00000637329 TMEM18Q96B42 140 aa11.02□□□□□ -0.65
CLN6-219ENST00000637329 C20orf78Q9BR46 151 aa11.02□□□□□ -0.65
CLN6-219ENST00000637329 NXT2Q9NPJ8 142 aaKnown RBP11.02□□□□□ -0.65
CLN6-219ENST00000637329 TRAV4A0A0B4J268 109 aa11.01□□□□□ -0.65
CLN6-219ENST00000637329 LINC00614P0C842 121 aa11.01□□□□□ -0.65
CLN6-219ENST00000637329 PMCHP20382 165 aa11.01□□□□□ -0.65
CLN6-219ENST00000637329 RPL32P62910 135 aaKnown RBP11.01□□□□□ -0.65
CLN6-219ENST00000637329 PDZD11Q5EBL8 140 aa11.01□□□□□ -0.65
CLN6-219ENST00000637329 FA2HQ7L5A8 372 aa11.01□□□□□ -0.65
CLN6-219ENST00000637329 NIT1Q86X76 327 aa11.01□□□□□ -0.65
CLN6-219ENST00000637329 HIST1H2BLQ99880 126 aa11.01□□□□□ -0.65
CLN6-219ENST00000637329 SAMD10Q9BYL1 202 aa11.01□□□□□ -0.65
CLN6-219ENST00000637329 NOP10Q9NPE3 64 aaKnown RBP11.01□□□□□ -0.65
CLN6-219ENST00000637329 TRBV6-5A0A0K0K1A5 114 aa11□□□□□ -0.65
CLN6-219ENST00000637329 IFITM10A6NMD0 228 aa11□□□□□ -0.65
CLN6-219ENST00000637329 F5H697 171 aa11□□□□□ -0.65
CLN6-219ENST00000637329 HSBP1O75506 76 aa11□□□□□ -0.65
CLN6-219ENST00000637329 PRSS3P2Q8NHM4 247 aa11□□□□□ -0.65
CLN6-219ENST00000637329 URB1-AS1Q96HZ7 61 aa11□□□□□ -0.65
CLN6-219ENST00000637329 C18orf15Q96N68 181 aa11□□□□□ -0.65
CLN6-219ENST00000637329 AP5S1Q9NUS5 200 aa11□□□□□ -0.65
CLN6-219ENST00000637329 LINC01546A6NGU7 62 aa10.99□□□□□ -0.65
CLN6-219ENST00000637329 LYRM9A8MSI8 78 aa10.99□□□□□ -0.65
CLN6-219ENST00000637329 GAS8-AS1O95177 125 aa10.99□□□□□ -0.65
CLN6-219ENST00000637329 GATA1P15976 413 aaPredicted RBP10.99□□□□□ -0.65
CLN6-219ENST00000637329 SUMO2P61956 95 aaKnown RBP10.99□□□□□ -0.65
CLN6-219ENST00000637329 Q6ZTI0 123 aa10.99□□□□□ -0.65
CLN6-219ENST00000637329 LINC00612Q8N6U2 182 aa10.99□□□□□ -0.65
CLN6-219ENST00000637329 OR11H2Q8NH07 326 aa10.99□□□□□ -0.65
CLN6-219ENST00000637329 SMIM2Q9BVW6 85 aa10.99□□□□□ -0.65
CLN6-219ENST00000637329 K7EMI3 77 aa10.98□□□□□ -0.65
CLN6-219ENST00000637329 M0QY20 66 aa10.98□□□□□ -0.65
CLN6-219ENST00000637329 NUPR1O60356 82 aa10.98□□□□□ -0.65
CLN6-219ENST00000637329 FABP4P15090 132 aa10.98□□□□□ -0.65
CLN6-219ENST00000637329 Q8N8P6 123 aa10.98□□□□□ -0.65
CLN6-219ENST00000637329 Q8NAQ8 132 aa10.98□□□□□ -0.65
CLN6-219ENST00000637329 OR4C5Q8NGB2 326 aa10.98□□□□□ -0.65
CLN6-219ENST00000637329 TEX48A0A1B0GUV7 120 aa10.97□□□□□ -0.65
CLN6-219ENST00000637329 IGHV3-53P01767 116 aa10.97□□□□□ -0.65
CLN6-219ENST00000637329 IFI27P40305 119 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms