RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 LINC00311Q8N616 119 aa12.52□□□□□ -0.4
CACNA1A-221ENST00000636012 PLA2G2CQ5R387 149 aa12.52□□□□□ -0.4
CACNA1A-221ENST00000636012 UBE2D4Q9Y2X8 147 aa12.52□□□□□ -0.4
CACNA1A-221ENST00000636012 HHLA3Q9XRX5 114 aa12.52□□□□□ -0.4
CACNA1A-221ENST00000636012 KLK5Q9Y337 293 aaPredicted RBP12.52□□□□□ -0.4
CACNA1A-221ENST00000636012 NTN5Q8WTR8 489 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-221ENST00000636012 MRPL36Q9P0J6 103 aaKnown RBP12.52□□□□□ -0.41
CACNA1A-221ENST00000636012 FAM215AQ9Y5M1 114 aa12.52□□□□□ -0.41
CACNA1A-221ENST00000636012 USP17L23D6RBM5 183 aa12.52□□□□□ -0.41
CACNA1A-221ENST00000636012 IGLV1-44P01699 117 aa12.52□□□□□ -0.41
CACNA1A-221ENST00000636012 DKK2Q9UBU2 259 aa12.52□□□□□ -0.41
CACNA1A-221ENST00000636012 FOXI1Q12951 378 aa12.51□□□□□ -0.41
CACNA1A-221ENST00000636012 ATP6V0E2Q8NHE4 81 aa12.51□□□□□ -0.41
CACNA1A-221ENST00000636012 IGLC1P0CG04 106 aa12.51□□□□□ -0.41
CACNA1A-221ENST00000636012 K7EQD1 137 aa12.51□□□□□ -0.41
CACNA1A-221ENST00000636012 V9GYV3 84 aa12.51□□□□□ -0.41
CACNA1A-221ENST00000636012 FAM208BQ5VWN6 2430 aa12.51□□□□□ -0.41
CACNA1A-221ENST00000636012 LYPD6BQ8NI32 183 aa12.51□□□□□ -0.41
CACNA1A-221ENST00000636012 BLCAPP62952 87 aa12.51□□□□□ -0.41
CACNA1A-221ENST00000636012 H3BUA1 57 aa12.5□□□□□ -0.41
CACNA1A-221ENST00000636012 RPL39LQ96EH5 51 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-221ENST00000636012 IGKV2D-26A0A0A0MRZ7 120 aa12.5□□□□□ -0.41
CACNA1A-221ENST00000636012 FAM236AA0A1B0GUQ0 79 aa12.5□□□□□ -0.41
CACNA1A-221ENST00000636012 FAM236BA0A1B0GV22 79 aa12.5□□□□□ -0.41
CACNA1A-221ENST00000636012 BVES-AS1Q5T3Y7 98 aa12.5□□□□□ -0.41
CACNA1A-221ENST00000636012 K7EM74 188 aa12.5□□□□□ -0.41
CACNA1A-221ENST00000636012 SPINK6Q6UWN8 80 aa12.5□□□□□ -0.41
CACNA1A-221ENST00000636012 TMEM61Q8N0U2 210 aa12.5□□□□□ -0.41
CACNA1A-221ENST00000636012 F8W1H4 67 aa12.49□□□□□ -0.41
CACNA1A-221ENST00000636012 C20orf78Q9BR46 151 aa12.49□□□□□ -0.41
CACNA1A-221ENST00000636012 DAZ2Q13117 558 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-221ENST00000636012 LGALS9BQ3B8N2 356 aa12.49□□□□□ -0.41
CACNA1A-221ENST00000636012 LGALS9CQ6DKI2 356 aa12.49□□□□□ -0.41
CACNA1A-221ENST00000636012 DAZ4Q86SG3 579 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-221ENST00000636012 ZNF491Q8N8L2 437 aa12.49□□□□□ -0.41
CACNA1A-221ENST00000636012 DAZ3Q9NR90 486 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-221ENST00000636012 CSPG4Q6UVK1 2322 aa12.49□□□□□ -0.41
CACNA1A-221ENST00000636012 IGHV2-70P01814 119 aa12.49□□□□□ -0.41
CACNA1A-221ENST00000636012 COX8AP10176 69 aa12.49□□□□□ -0.41
CACNA1A-221ENST00000636012 DEFB125Q8N687 156 aa12.49□□□□□ -0.41
CACNA1A-221ENST00000636012 RAI1Q7Z5J4 1906 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-221ENST00000636012 DEFB135Q30KP9 77 aa12.48□□□□□ -0.41
CACNA1A-221ENST00000636012 TRAV23DV6A0A075B6W5 121 aa12.48□□□□□ -0.41
CACNA1A-221ENST00000636012 TEX49A0A1B0GTD5 131 aa12.48□□□□□ -0.41
CACNA1A-221ENST00000636012 SPRNQ5BIV9 151 aa12.48□□□□□ -0.41
CACNA1A-221ENST00000636012 PRR15LQ9BU68 103 aa12.48□□□□□ -0.41
CACNA1A-221ENST00000636012 IGLC2P0DOY2 106 aa12.47□□□□□ -0.41
CACNA1A-221ENST00000636012 IGLC3P0DOY3 106 aa12.47□□□□□ -0.41
CACNA1A-221ENST00000636012 CENPVL3A0A0U1RRI6 287 aa12.47□□□□□ -0.41
CACNA1A-221ENST00000636012 CFPP27918 469 aa12.47□□□□□ -0.41
CACNA1A-221ENST00000636012 RITA1Q96K30 269 aa12.47□□□□□ -0.41
CACNA1A-221ENST00000636012 ADCYAP1P18509 176 aa12.47□□□□□ -0.41
CACNA1A-221ENST00000636012 LTAP01374 205 aa12.46□□□□□ -0.41
CACNA1A-221ENST00000636012 ZFP36P26651 326 aaKnown RBP12.46□□□□□ -0.41
CACNA1A-221ENST00000636012 ZNF726P1Q15940 193 aa12.46□□□□□ -0.41
CACNA1A-221ENST00000636012 ATP5G1P05496 136 aa12.46□□□□□ -0.41
CACNA1A-221ENST00000636012 SCXQ7RTU7 201 aa12.46□□□□□ -0.41
CACNA1A-221ENST00000636012 AJUBAQ96IF1 538 aa12.46□□□□□ -0.42
CACNA1A-221ENST00000636012 A0A1W2PPM0 123 aa12.46□□□□□ -0.42
CACNA1A-221ENST00000636012 C9JQL5 133 aa12.46□□□□□ -0.42
CACNA1A-221ENST00000636012 PIP4P1Q86T03 277 aa12.46□□□□□ -0.42
CACNA1A-221ENST00000636012 K7EP13 123 aa12.46□□□□□ -0.42
CACNA1A-221ENST00000636012 NPSP0C0P6 89 aa12.46□□□□□ -0.42
CACNA1A-221ENST00000636012 PRR20EP86478 221 aa12.46□□□□□ -0.42
CACNA1A-221ENST00000636012 PRR20CP86479 221 aa12.46□□□□□ -0.42
CACNA1A-221ENST00000636012 PRR20DP86480 221 aa12.46□□□□□ -0.42
CACNA1A-221ENST00000636012 PRR20BP86481 221 aa12.46□□□□□ -0.42
CACNA1A-221ENST00000636012 PRR20AP86496 221 aa12.46□□□□□ -0.42
CACNA1A-221ENST00000636012 B9D2Q9BPU9 175 aa12.45□□□□□ -0.42
CACNA1A-221ENST00000636012 PCP2Q8IVA1 136 aa12.45□□□□□ -0.42
CACNA1A-221ENST00000636012 CTSZQ9UBR2 303 aa12.45□□□□□ -0.42
CACNA1A-221ENST00000636012 IGF2-ASQ6U949 168 aa12.44□□□□□ -0.42
CACNA1A-221ENST00000636012 MUC6Q6W4X9 2439 aa12.44□□□□□ -0.42
CACNA1A-221ENST00000636012 SH2D6Q7Z4S9 175 aa12.44□□□□□ -0.42
CACNA1A-221ENST00000636012 PRSS47A8MTI9 375 aa12.44□□□□□ -0.42
CACNA1A-221ENST00000636012 PTPN13Q12923 2485 aa12.44□□□□□ -0.42
CACNA1A-221ENST00000636012 Q6ZWC4 215 aa12.44□□□□□ -0.42
CACNA1A-221ENST00000636012 ZNF493Q6ZR52 646 aa12.44□□□□□ -0.42
CACNA1A-221ENST00000636012 TRBV12-3P01733 135 aa12.44□□□□□ -0.42
CACNA1A-221ENST00000636012 GATA1P15976 413 aaPredicted RBP12.44□□□□□ -0.42
CACNA1A-221ENST00000636012 NAV3Q8IVL0 2385 aa12.44□□□□□ -0.42
CACNA1A-221ENST00000636012 SIRPDQ9H106 197 aa12.43□□□□□ -0.42
CACNA1A-221ENST00000636012 NCOR1P1Q9H4R4 102 aa12.43□□□□□ -0.42
CACNA1A-221ENST00000636012 HIGD2AQ9BW72 106 aa12.43□□□□□ -0.42
CACNA1A-221ENST00000636012 KAAG1Q9UBP8 84 aa12.43□□□□□ -0.42
CACNA1A-221ENST00000636012 AGPAT4-IT1Q9H0P7 198 aa12.43□□□□□ -0.42
CACNA1A-221ENST00000636012 WI2-2373I1.2A0A1W2PRP0 233 aa12.43□□□□□ -0.42
CACNA1A-221ENST00000636012 IGLL1P15814 213 aa12.43□□□□□ -0.42
CACNA1A-221ENST00000636012 UBE2D1P51668 147 aa12.43□□□□□ -0.42
CACNA1A-221ENST00000636012 SERP1Q9Y6X1 66 aa12.43□□□□□ -0.42
CACNA1A-221ENST00000636012 IGLC7A0M8Q6 106 aa12.42□□□□□ -0.42
CACNA1A-221ENST00000636012 SND1-IT1Q9HBX3 110 aa12.42□□□□□ -0.42
CACNA1A-221ENST00000636012 RBAKDNA6NC62 111 aa12.42□□□□□ -0.42
CACNA1A-221ENST00000636012 FHL1Q13642 323 aa12.42□□□□□ -0.42
CACNA1A-221ENST00000636012 SMAD5-AS1Q9Y6J3 95 aa12.42□□□□□ -0.42
CACNA1A-221ENST00000636012 C12orf74Q32Q52 190 aa12.41□□□□□ -0.42
CACNA1A-221ENST00000636012 TRBV10-2A0A0K0K1G8 114 aa12.41□□□□□ -0.42
CACNA1A-221ENST00000636012 KLK12Q9UKR0 248 aa12.41□□□□□ -0.42
CACNA1A-221ENST00000636012 A0A087WZ39 114 aa12.41□□□□□ -0.42
CACNA1A-221ENST00000636012 TRBV7-3A0A075B6L6 115 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms