RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 TSKUQ8WUA8 353 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 PPDPFLQ8WWR9 84 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 SCGB3A1Q96QR1 104 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 CHCHD7Q9BUK0 85 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 NDUFB11Q9NX14 153 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 LCTP09848 1927 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 URB1O60287 2271 aaKnown RBP3.35□□□□□ -1.87
SDCBP-213ENST00000630925 A0A1B0GVX0 72 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 K7EM74 188 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 NUPR1O60356 82 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 INSL4Q14641 139 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 ETDBQ3ZM63 59 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 C5orf38Q86SI9 138 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 AMN1Q8IY45 258 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 TMEM256Q8N2U0 113 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 CLEC2BQ92478 149 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 LY96Q9Y6Y9 160 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 SVILO95425 2214 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 F8P00451 2351 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 TDRD6O60522 2096 aaKnown RBP3.35□□□□□ -1.87
SDCBP-213ENST00000630925 IGHV5-51A0A0C4DH38 117 aa3.34□□□□□ -1.87
SDCBP-213ENST00000630925 TMEM235A6NFC5 223 aa3.34□□□□□ -1.87
SDCBP-213ENST00000630925 CFC1BP0CG36 223 aa3.34□□□□□ -1.87
SDCBP-213ENST00000630925 WFDC2Q14508 124 aa3.34□□□□□ -1.87
SDCBP-213ENST00000630925 SPATA45Q537H7 98 aa3.34□□□□□ -1.87
SDCBP-213ENST00000630925 Q6P435 159 aa3.34□□□□□ -1.87
SDCBP-213ENST00000630925 SMIM29Q86T20 159 aa3.34□□□□□ -1.87
SDCBP-213ENST00000630925 C8orf49Q96NF6 230 aa3.34□□□□□ -1.87
SDCBP-213ENST00000630925 C7orf77A4D0Y5 90 aa3.34□□□□□ -1.88
SDCBP-213ENST00000630925 A8MWP4 228 aa3.34□□□□□ -1.88
SDCBP-213ENST00000630925 BPY2O14599 106 aa3.34□□□□□ -1.88
SDCBP-213ENST00000630925 APCSP02743 223 aa3.34□□□□□ -1.88
SDCBP-213ENST00000630925 IGHV1-8P0DP01 117 aa3.34□□□□□ -1.88
SDCBP-213ENST00000630925 FXYD7P58549 80 aa3.34□□□□□ -1.88
SDCBP-213ENST00000630925 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.34□□□□□ -1.88
SDCBP-213ENST00000630925 IGFL4Q6B9Z1 124 aa3.34□□□□□ -1.88
SDCBP-213ENST00000630925 C15orf56Q8N910 161 aa3.34□□□□□ -1.88
SDCBP-213ENST00000630925 FAM213BQ8TBF2 198 aa3.34□□□□□ -1.88
SDCBP-213ENST00000630925 RPS10P5Q9NQ39 176 aa3.34□□□□□ -1.88
SDCBP-213ENST00000630925 PRO0461Q9UI25 63 aa3.34□□□□□ -1.88
SDCBP-213ENST00000630925 BOD1L1Q8NFC6 3051 aa3.34□□□□□ -1.88
SDCBP-213ENST00000630925 IL5P05113 134 aa3.33□□□□□ -1.88
SDCBP-213ENST00000630925 SAA1P0DJI8 122 aaPredicted RBP3.33□□□□□ -1.88
SDCBP-213ENST00000630925 FAUP35544 74 aaKnown RBP3.33□□□□□ -1.88
SDCBP-213ENST00000630925 ATP5EP56381 51 aaPredicted RBP3.33□□□□□ -1.88
SDCBP-213ENST00000630925 FUT5Q11128 374 aa3.33□□□□□ -1.88
SDCBP-213ENST00000630925 ASB16-AS1Q495Z4 193 aa3.33□□□□□ -1.88
SDCBP-213ENST00000630925 Q6ZQT7 251 aa3.33□□□□□ -1.88
SDCBP-213ENST00000630925 Q8N1X5 172 aa3.33□□□□□ -1.88
SDCBP-213ENST00000630925 CNEP1R1Q8N9A8 125 aa3.33□□□□□ -1.88
SDCBP-213ENST00000630925 CXCL16Q9H2A7 254 aa3.33□□□□□ -1.88
SDCBP-213ENST00000630925 RPP21Q9H633 154 aaKnown RBP3.33□□□□□ -1.88
SDCBP-213ENST00000630925 HIVEP1P15822 2718 aa3.33□□□□□ -1.88
SDCBP-213ENST00000630925 CACNA1EQ15878 2313 aa3.33□□□□□ -1.88
SDCBP-213ENST00000630925 COL4A2P08572 1712 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 IGLV3-12A0A075B6K2 115 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 MUC21A0A140T8X8 626 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 C19orf71A6NCJ1 209 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 IBA57-AS1B1ANH7 110 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 CREBL2O60519 120 aaPredicted RBP3.32□□□□□ -1.88
SDCBP-213ENST00000630925 NMSQ5H8A3 153 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 C12orf73Q69YU5 71 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 MUCL1Q96DR8 90 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 LINC00479Q96M42 142 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 GABARAPL1Q9H0R8 117 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 ZNF407Q9C0G0 2248 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 A0A087WWC5 75 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 SYS1-DBNDD2H3BUS1 97 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 K7ERS5 55 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 ATOX1O00244 68 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 HSPB1P04792 205 aaKnown RBP3.32□□□□□ -1.88
SDCBP-213ENST00000630925 TLX1NBP0CAT3 122 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 PEBP1P30086 187 aaKnown RBP3.32□□□□□ -1.88
SDCBP-213ENST00000630925 CKS2P33552 79 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 SH2D6Q7Z4S9 175 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 CIRBP-AS1Q8TBR5 109 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 SPTSSAQ969W0 71 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 CHCHD1Q96BP2 118 aaKnown RBP3.32□□□□□ -1.88
SDCBP-213ENST00000630925 FGFBP2Q9BYJ0 223 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 CYTL1Q9NRR1 136 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 ARID1AO14497 2285 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 CELSR2Q9HCU4 2923 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 BSNQ9UPA5 3926 aa3.32□□□□□ -1.88
SDCBP-213ENST00000630925 MDFIC2A0A1B0GVS7 189 aa3.31□□□□□ -1.88
SDCBP-213ENST00000630925 LECT2O14960 151 aa3.31□□□□□ -1.88
SDCBP-213ENST00000630925 IGKV1D-33P01593 117 aa3.31□□□□□ -1.88
SDCBP-213ENST00000630925 IGKV1-33P01594 117 aa3.31□□□□□ -1.88
SDCBP-213ENST00000630925 IGHV1-69P01742 117 aa3.31□□□□□ -1.88
SDCBP-213ENST00000630925 PTHLHP12272 177 aa3.31□□□□□ -1.88
SDCBP-213ENST00000630925 SUPT4H1P63272 117 aaKnown RBP3.31□□□□□ -1.88
SDCBP-213ENST00000630925 ZNF322Q6U7Q0 402 aaPredicted RBP3.31□□□□□ -1.88
SDCBP-213ENST00000630925 NTM-AS1Q6ZSK4 140 aa3.31□□□□□ -1.88
SDCBP-213ENST00000630925 SMCR5Q8TEV8 140 aa3.31□□□□□ -1.88
SDCBP-213ENST00000630925 AQP3Q92482 292 aa3.31□□□□□ -1.88
SDCBP-213ENST00000630925 SDF2L1Q9HCN8 221 aa3.31□□□□□ -1.88
SDCBP-213ENST00000630925 ASCC3Q8N3C0 2202 aaKnown RBP3.31□□□□□ -1.88
SDCBP-213ENST00000630925 TRAV14DV4A0A0A6YYC5 116 aa3.31□□□□□ -1.88
SDCBP-213ENST00000630925 C17orf51A8MQB3 221 aa3.31□□□□□ -1.88
SDCBP-213ENST00000630925 SOCS2O14508 198 aa3.31□□□□□ -1.88
SDCBP-213ENST00000630925 TRGV3P03979 118 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms