RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 A0A087WWL8 130 aa12.53□□□□□ -0.4
SPTAN1-217ENST00000629089 RS1O15537 224 aa12.53□□□□□ -0.4
SPTAN1-217ENST00000629089 S100A8P05109 93 aa12.53□□□□□ -0.4
SPTAN1-217ENST00000629089 EVI2AP22794 236 aa12.53□□□□□ -0.4
SPTAN1-217ENST00000629089 NANOS2P60321 138 aaKnown RBP12.53□□□□□ -0.4
SPTAN1-217ENST00000629089 C18orf15Q96N68 181 aa12.53□□□□□ -0.4
SPTAN1-217ENST00000629089 FBN3Q75N90 2809 aa12.53□□□□□ -0.4
SPTAN1-217ENST00000629089 A0A1B0GXF2 115 aa12.52□□□□□ -0.4
SPTAN1-217ENST00000629089 POM121L12Q8N7R1 296 aa12.52□□□□□ -0.4
SPTAN1-217ENST00000629089 ZNF479Q96JC4 524 aa12.52□□□□□ -0.4
SPTAN1-217ENST00000629089 SAMD10Q9BYL1 202 aa12.52□□□□□ -0.4
SPTAN1-217ENST00000629089 EDA2RQ9HAV5 297 aa12.52□□□□□ -0.4
SPTAN1-217ENST00000629089 TGIF2-C20orf24A0A0A6YYL0 155 aa12.52□□□□□ -0.41
SPTAN1-217ENST00000629089 IGHV3-73A0A0B4J1V6 119 aa12.52□□□□□ -0.41
SPTAN1-217ENST00000629089 DPH3P1Q9H4G8 78 aa12.52□□□□□ -0.41
SPTAN1-217ENST00000629089 ATP5G1P05496 136 aa12.51□□□□□ -0.41
SPTAN1-217ENST00000629089 CRYGDP07320 174 aa12.51□□□□□ -0.41
SPTAN1-217ENST00000629089 RAB4BP61018 213 aa12.51□□□□□ -0.41
SPTAN1-217ENST00000629089 Q6ZTC4 211 aa12.51□□□□□ -0.41
SPTAN1-217ENST00000629089 COL7A1Q02388 2944 aa12.5□□□□□ -0.41
SPTAN1-217ENST00000629089 RHODO00212 210 aa12.5□□□□□ -0.41
SPTAN1-217ENST00000629089 MGPP08493 103 aa12.5□□□□□ -0.41
SPTAN1-217ENST00000629089 HTN3P15516 51 aa12.5□□□□□ -0.41
SPTAN1-217ENST00000629089 RASL11AQ6T310 242 aa12.5□□□□□ -0.41
SPTAN1-217ENST00000629089 TMEM191AQ9H0A3 160 aa12.5□□□□□ -0.41
SPTAN1-217ENST00000629089 TRBV24-1A0A075B6N3 115 aa12.49□□□□□ -0.41
SPTAN1-217ENST00000629089 TRGV4A0A0C4DH28 118 aa12.49□□□□□ -0.41
SPTAN1-217ENST00000629089 CIDEAO60543 219 aa12.49□□□□□ -0.41
SPTAN1-217ENST00000629089 ZNF56Q15929 161 aa12.49□□□□□ -0.41
SPTAN1-217ENST00000629089 ZFP2Q6ZN57 461 aa12.49□□□□□ -0.41
SPTAN1-217ENST00000629089 F5H697 171 aa12.48□□□□□ -0.41
SPTAN1-217ENST00000629089 FAM210BQ96KR6 192 aa12.48□□□□□ -0.41
SPTAN1-217ENST00000629089 YPEL4Q96NS1 127 aa12.48□□□□□ -0.41
SPTAN1-217ENST00000629089 KIF25-AS1Q9Y6Z4 181 aa12.48□□□□□ -0.41
SPTAN1-217ENST00000629089 F5H768 121 aa12.47□□□□□ -0.41
SPTAN1-217ENST00000629089 UFSP1Q6NVU6 142 aa12.47□□□□□ -0.41
SPTAN1-217ENST00000629089 AMN1Q8IY45 258 aa12.47□□□□□ -0.41
SPTAN1-217ENST00000629089 NACAE9PAV3 2078 aa12.47□□□□□ -0.41
SPTAN1-217ENST00000629089 COX19Q49B96 90 aa12.47□□□□□ -0.41
SPTAN1-217ENST00000629089 GATD1Q8NB37 220 aa12.47□□□□□ -0.41
SPTAN1-217ENST00000629089 HOXA5P20719 270 aa12.46□□□□□ -0.42
SPTAN1-217ENST00000629089 FHL2Q14192 279 aa12.46□□□□□ -0.42
SPTAN1-217ENST00000629089 DEFB131BA0A096LNP1 70 aa12.45□□□□□ -0.42
SPTAN1-217ENST00000629089 TRAV10A0A0B4J240 114 aa12.45□□□□□ -0.42
SPTAN1-217ENST00000629089 LINC00315P59091 139 aa12.45□□□□□ -0.42
SPTAN1-217ENST00000629089 FAM104BQ5XKR9 115 aa12.45□□□□□ -0.42
SPTAN1-217ENST00000629089 TMEM136Q6ZRR5 245 aa12.45□□□□□ -0.42
SPTAN1-217ENST00000629089 GNB1LQ9BYB4 327 aa12.45□□□□□ -0.42
SPTAN1-217ENST00000629089 HLA-DQA1P01909 254 aa12.44□□□□□ -0.42
SPTAN1-217ENST00000629089 RAB4AP20338 218 aa12.44□□□□□ -0.42
SPTAN1-217ENST00000629089 RNF185Q96GF1 192 aa12.44□□□□□ -0.42
SPTAN1-217ENST00000629089 HHLA3Q9XRX5 114 aa12.44□□□□□ -0.42
SPTAN1-217ENST00000629089 GATA1P15976 413 aaPredicted RBP12.43□□□□□ -0.42
SPTAN1-217ENST00000629089 SLAQ13239 276 aa12.43□□□□□ -0.42
SPTAN1-217ENST00000629089 PRO0255Q9UI72 69 aa12.43□□□□□ -0.42
SPTAN1-217ENST00000629089 COLCA2A8K830 154 aa12.42□□□□□ -0.42
SPTAN1-217ENST00000629089 MT-ND6P03923 174 aa12.42□□□□□ -0.42
SPTAN1-217ENST00000629089 SUMO4Q6EEV6 95 aa12.42□□□□□ -0.42
SPTAN1-217ENST00000629089 Q6ZSN1 163 aa12.42□□□□□ -0.42
SPTAN1-217ENST00000629089 PHLDA1Q8WV24 401 aaPredicted RBP12.42□□□□□ -0.42
SPTAN1-217ENST00000629089 FRZBQ92765 325 aa12.42□□□□□ -0.42
SPTAN1-217ENST00000629089 TRAV26-2A0A0B4J265 109 aa12.42□□□□□ -0.42
SPTAN1-217ENST00000629089 TRBV6-4A0A1B0GX49 114 aa12.42□□□□□ -0.42
SPTAN1-217ENST00000629089 K7EQD1 137 aa12.42□□□□□ -0.42
SPTAN1-217ENST00000629089 MRPL51Q4U2R6 128 aaKnown RBP12.42□□□□□ -0.42
SPTAN1-217ENST00000629089 SLC25A29Q8N8R3 303 aa12.42□□□□□ -0.42
SPTAN1-217ENST00000629089 TRAPPC1Q9Y5R8 145 aa12.42□□□□□ -0.42
SPTAN1-217ENST00000629089 A0A0J9YY99 117 aa12.41□□□□□ -0.42
SPTAN1-217ENST00000629089 H7C1H1 209 aa12.41□□□□□ -0.42
SPTAN1-217ENST00000629089 APCSP02743 223 aa12.41□□□□□ -0.42
SPTAN1-217ENST00000629089 CRYBA4P53673 196 aa12.41□□□□□ -0.42
SPTAN1-217ENST00000629089 RHOHQ15669 191 aa12.41□□□□□ -0.42
SPTAN1-217ENST00000629089 MRAP2Q96G30 205 aa12.41□□□□□ -0.42
SPTAN1-217ENST00000629089 PRADC1Q9BSG0 188 aa12.41□□□□□ -0.42
SPTAN1-217ENST00000629089 MRPL18Q9H0U6 180 aaKnown RBP12.41□□□□□ -0.42
SPTAN1-217ENST00000629089 TRAV26-1A0A087WT03 109 aa12.4□□□□□ -0.42
SPTAN1-217ENST00000629089 PAX4O43316 350 aa12.4□□□□□ -0.42
SPTAN1-217ENST00000629089 RPS10P46783 165 aaKnown RBP12.4□□□□□ -0.42
SPTAN1-217ENST00000629089 NCR2O95944 276 aa12.39□□□□□ -0.43
SPTAN1-217ENST00000629089 RAB5AP20339 215 aa12.39□□□□□ -0.43
SPTAN1-217ENST00000629089 CKS2P33552 79 aa12.39□□□□□ -0.43
SPTAN1-217ENST00000629089 FABP9Q0Z7S8 132 aa12.39□□□□□ -0.43
SPTAN1-217ENST00000629089 D6R8Y8 96 aa12.38□□□□□ -0.43
SPTAN1-217ENST00000629089 SMKR1H3BMG3 65 aa12.38□□□□□ -0.43
SPTAN1-217ENST00000629089 M0QY20 66 aa12.38□□□□□ -0.43
SPTAN1-217ENST00000629089 P0DMU3 169 aa12.38□□□□□ -0.43
SPTAN1-217ENST00000629089 FAM231AP0DMU4 169 aa12.38□□□□□ -0.43
SPTAN1-217ENST00000629089 FAM231CP0DMU5 169 aa12.38□□□□□ -0.43
SPTAN1-217ENST00000629089 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.38□□□□□ -0.43
SPTAN1-217ENST00000629089 WWC2-AS2Q96NR7 200 aa12.38□□□□□ -0.43
SPTAN1-217ENST00000629089 STAB2Q8WWQ8 2551 aa12.38□□□□□ -0.43
SPTAN1-217ENST00000629089 KIAA1644Q3SXP7 199 aa12.37□□□□□ -0.43
SPTAN1-217ENST00000629089 ORMDL3Q8N138 153 aa12.37□□□□□ -0.43
SPTAN1-217ENST00000629089 TRBV10-1A0A0K0K1A3 114 aa12.37□□□□□ -0.43
SPTAN1-217ENST00000629089 GAS8-AS1O95177 125 aa12.37□□□□□ -0.43
SPTAN1-217ENST00000629089 PPBPP02775 128 aa12.37□□□□□ -0.43
SPTAN1-217ENST00000629089 GYPEP15421 78 aa12.37□□□□□ -0.43
SPTAN1-217ENST00000629089 VSIG2Q96IQ7 327 aa12.37□□□□□ -0.43
SPTAN1-217ENST00000629089 LOC100131303A0A0U1RQF7 123 aa12.36□□□□□ -0.43
SPTAN1-217ENST00000629089 OR10J3Q5JRS4 329 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms