RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 IGLV4-69A0A075B6H9 119 aa14.29□□□□□ -0.12
PTBP1-220ENST00000627714 A0A087WWL8 130 aa14.29□□□□□ -0.12
PTBP1-220ENST00000627714 ZNF688P0C7X2 276 aa14.29□□□□□ -0.12
PTBP1-220ENST00000627714 JPT2Q9H910 190 aa14.29□□□□□ -0.12
PTBP1-220ENST00000627714 K7EQG2 157 aa14.29□□□□□ -0.12
PTBP1-220ENST00000627714 HOXA3O43365 443 aaPredicted RBP14.29□□□□□ -0.12
PTBP1-220ENST00000627714 C11orf86A6NJI1 115 aa14.28□□□□□ -0.12
PTBP1-220ENST00000627714 RPL24P83731 157 aaKnown RBP14.28□□□□□ -0.12
PTBP1-220ENST00000627714 IGHV4-59P01825 116 aa14.27□□□□□ -0.12
PTBP1-220ENST00000627714 DEFB112Q30KQ8 113 aa14.27□□□□□ -0.12
PTBP1-220ENST00000627714 J3QLI3 93 aa14.27□□□□□ -0.13
PTBP1-220ENST00000627714 RHOHQ15669 191 aa14.27□□□□□ -0.13
PTBP1-220ENST00000627714 LINC01356Q8N9X3 169 aa14.27□□□□□ -0.13
PTBP1-220ENST00000627714 IGHV1OR15-1A0A075B7D0 117 aa14.26□□□□□ -0.13
PTBP1-220ENST00000627714 TEX48A0A1B0GUV7 120 aa14.26□□□□□ -0.13
PTBP1-220ENST00000627714 NSUN5P1Q3KNT7 163 aa14.26□□□□□ -0.13
PTBP1-220ENST00000627714 CD300EQ496F6 205 aaPredicted RBP14.26□□□□□ -0.13
PTBP1-220ENST00000627714 TRPT1Q86TN4 253 aaKnown RBP14.26□□□□□ -0.13
PTBP1-220ENST00000627714 RNF152Q8N8N0 203 aa14.26□□□□□ -0.13
PTBP1-220ENST00000627714 WFDC12Q8WWY7 111 aa14.26□□□□□ -0.13
PTBP1-220ENST00000627714 SRSF9Q13242 221 aaKnown RBP eCLIP14.25□□□□□ -0.13
PTBP1-220ENST00000627714 J3QR89 54 aa14.25□□□□□ -0.13
PTBP1-220ENST00000627714 M0QY20 66 aa14.25□□□□□ -0.13
PTBP1-220ENST00000627714 RPL39P62891 51 aaKnown RBP14.25□□□□□ -0.13
PTBP1-220ENST00000627714 ZNF56Q15929 161 aa14.25□□□□□ -0.13
PTBP1-220ENST00000627714 ZNF876PQ49A33 203 aa14.25□□□□□ -0.13
PTBP1-220ENST00000627714 FAM74A4Q5TZK3 123 aa14.25□□□□□ -0.13
PTBP1-220ENST00000627714 Q8N1Y9 231 aa14.25□□□□□ -0.13
PTBP1-220ENST00000627714 MDFICQ9P1T7 246 aa14.24□□□□□ -0.13
PTBP1-220ENST00000627714 ZFHX3Q15911 3703 aa14.24□□□□□ -0.13
PTBP1-220ENST00000627714 H3BMG7 143 aa14.23□□□□□ -0.13
PTBP1-220ENST00000627714 UBE2D1P51668 147 aa14.23□□□□□ -0.13
PTBP1-220ENST00000627714 MORN3Q6PF18 240 aaPredicted RBP14.23□□□□□ -0.13
PTBP1-220ENST00000627714 PLEKHB2Q96CS7 222 aa14.23□□□□□ -0.13
PTBP1-220ENST00000627714 TRGV11A0A075B6L2 103 aa14.23□□□□□ -0.13
PTBP1-220ENST00000627714 ELANEP08246 267 aa14.23□□□□□ -0.13
PTBP1-220ENST00000627714 GAGE13Q4V321 117 aa14.23□□□□□ -0.13
PTBP1-220ENST00000627714 SPANXB1Q9NS25 103 aaPredicted RBP14.23□□□□□ -0.13
PTBP1-220ENST00000627714 TRAV12-2A0A075B6T6 113 aa14.22□□□□□ -0.13
PTBP1-220ENST00000627714 PGPEP1Q9NXJ5 209 aa14.22□□□□□ -0.13
PTBP1-220ENST00000627714 MRPL16Q9NX20 251 aaKnown RBP14.22□□□□□ -0.13
PTBP1-220ENST00000627714 ZNF256Q9Y2P7 627 aaPredicted RBP14.22□□□□□ -0.13
PTBP1-220ENST00000627714 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.22□□□□□ -0.132e-8■■■■□ 21.4
PTBP1-220ENST00000627714 A0A0J9YY99 117 aa14.21□□□□□ -0.13
PTBP1-220ENST00000627714 IGKV3-20P01619 116 aa14.21□□□□□ -0.13
PTBP1-220ENST00000627714 WFDC2Q14508 124 aa14.21□□□□□ -0.13
PTBP1-220ENST00000627714 C10orf99Q6UWK7 81 aa14.21□□□□□ -0.13
PTBP1-220ENST00000627714 NFE4Q86UQ8 179 aa14.21□□□□□ -0.13
PTBP1-220ENST00000627714 KLHL30-AS1Q8NEE0 82 aa14.21□□□□□ -0.13
PTBP1-220ENST00000627714 CELSR1Q9NYQ6 3014 aa14.21□□□□□ -0.14
PTBP1-220ENST00000627714 SYNJ2BPP57105 145 aa14.21□□□□□ -0.14
PTBP1-220ENST00000627714 SPINK13Q1W4C9 94 aa14.21□□□□□ -0.14
PTBP1-220ENST00000627714 TMEM170BQ5T4T1 132 aa14.21□□□□□ -0.14
PTBP1-220ENST00000627714 LYRM7Q5U5X0 104 aa14.2□□□□□ -0.14
PTBP1-220ENST00000627714 UBE2E2Q96LR5 201 aa14.2□□□□□ -0.14
PTBP1-220ENST00000627714 VPREB3Q9UKI3 123 aa14.2□□□□□ -0.14
PTBP1-220ENST00000627714 EMP1P54849 157 aa14.19□□□□□ -0.14
PTBP1-220ENST00000627714 AMTNQ6UX39 209 aa14.19□□□□□ -0.14
PTBP1-220ENST00000627714 ZNRF2Q8NHG8 242 aa14.19□□□□□ -0.14
PTBP1-220ENST00000627714 EDA2RQ9HAV5 297 aa14.19□□□□□ -0.14
PTBP1-220ENST00000627714 PRO0461Q9UI25 63 aa14.19□□□□□ -0.14
PTBP1-220ENST00000627714 I3L3M4 83 aa14.18□□□□□ -0.14
PTBP1-220ENST00000627714 SLC25A29Q8N8R3 303 aa14.18□□□□□ -0.14
PTBP1-220ENST00000627714 DLX4Q92988 240 aaPredicted RBP14.18□□□□□ -0.14
PTBP1-220ENST00000627714 A0A096LNT2 108 aa14.17□□□□□ -0.14
PTBP1-220ENST00000627714 HOXD3P31249 432 aaPredicted RBP14.17□□□□□ -0.14
PTBP1-220ENST00000627714 C20orf203Q8NBC4 194 aa14.17□□□□□ -0.14
PTBP1-220ENST00000627714 DOPEY1Q5JWR5 2465 aa14.17□□□□□ -0.14
PTBP1-220ENST00000627714 J3QQQ9 107 aa14.17□□□□□ -0.14
PTBP1-220ENST00000627714 LGALS3P17931 250 aaKnown RBP14.16□□□□□ -0.14
PTBP1-220ENST00000627714 VPS13CQ709C8 3753 aa14.16□□□□□ -0.14
PTBP1-220ENST00000627714 TGFAP01135 160 aa14.15□□□□□ -0.14
PTBP1-220ENST00000627714 TSPEAR-AS2P59090 65 aa14.15□□□□□ -0.14
PTBP1-220ENST00000627714 DEFB104AQ8WTQ1 72 aa14.15□□□□□ -0.14
PTBP1-220ENST00000627714 PKD1L2Q7Z442 2459 aa14.15□□□□□ -0.14
PTBP1-220ENST00000627714 TSPAN13O95857 204 aa14.15□□□□□ -0.14
PTBP1-220ENST00000627714 IGHV3-30P01768 117 aa14.15□□□□□ -0.14
PTBP1-220ENST00000627714 IGHV3-30-5P0DP03 117 aa14.15□□□□□ -0.14
PTBP1-220ENST00000627714 ETDBQ3ZM63 59 aa14.15□□□□□ -0.14
PTBP1-220ENST00000627714 LEPROTO15243 131 aa14.14□□□□□ -0.15
PTBP1-220ENST00000627714 P0DMU3 169 aa14.14□□□□□ -0.15
PTBP1-220ENST00000627714 FAM231AP0DMU4 169 aa14.14□□□□□ -0.15
PTBP1-220ENST00000627714 FAM231CP0DMU5 169 aa14.14□□□□□ -0.15
PTBP1-220ENST00000627714 Q6YL49 198 aa14.14□□□□□ -0.15
PTBP1-220ENST00000627714 NDUFA11Q86Y39 141 aa14.14□□□□□ -0.15
PTBP1-220ENST00000627714 AMELXQ99217 191 aa14.14□□□□□ -0.15
PTBP1-220ENST00000627714 ZNF702PQ9H963 129 aa14.14□□□□□ -0.15
PTBP1-220ENST00000627714 TMEM223A0PJW6 202 aa14.14□□□□□ -0.15
PTBP1-220ENST00000627714 UBE2D3P61077 147 aa14.14□□□□□ -0.15
PTBP1-220ENST00000627714 UBE2D2P62837 147 aa14.14□□□□□ -0.15
PTBP1-220ENST00000627714 FSHBP01225 129 aa14.13□□□□□ -0.15
PTBP1-220ENST00000627714 A8MTW9 85 aa14.13□□□□□ -0.15
PTBP1-220ENST00000627714 TCTEX1D4Q5JR98 221 aa14.13□□□□□ -0.15
PTBP1-220ENST00000627714 NRGNQ92686 78 aa14.13□□□□□ -0.15
PTBP1-220ENST00000627714 TRAV2A0A0B4J234 112 aa14.12□□□□□ -0.15
PTBP1-220ENST00000627714 APOMO95445 188 aa14.12□□□□□ -0.15
PTBP1-220ENST00000627714 PIK3CD-AS1Q5SR53 167 aa14.12□□□□□ -0.15
PTBP1-220ENST00000627714 SH2D6Q7Z4S9 175 aa14.12□□□□□ -0.15
PTBP1-220ENST00000627714 ATP6V0E2Q8NHE4 81 aa14.12□□□□□ -0.15
PTBP1-220ENST00000627714 SPG11Q96JI7 2443 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms