RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 Q8N3U1 123 aa12.79□□□□□ -0.36
ATG4B-226ENST00000625810 Q9UF83 564 aa12.79□□□□□ -0.36
ATG4B-226ENST00000625810 SRRM2Q9UQ35 2752 aaKnown RBP12.78□□□□□ -0.36
ATG4B-226ENST00000625810 TRAV8-3A0A0A6YYJ7 113 aa12.78□□□□□ -0.36
ATG4B-226ENST00000625810 AKR1C3P42330 323 aa12.78□□□□□ -0.36
ATG4B-226ENST00000625810 TOR2AQ5JU69 321 aa12.78□□□□□ -0.36
ATG4B-226ENST00000625810 TMEM70Q9BUB7 260 aa12.78□□□□□ -0.36
ATG4B-226ENST00000625810 A0A087WWL8 130 aa12.77□□□□□ -0.37
ATG4B-226ENST00000625810 M0R381 172 aa12.77□□□□□ -0.37
ATG4B-226ENST00000625810 FHITP49789 147 aa12.77□□□□□ -0.37
ATG4B-226ENST00000625810 HAMPP81172 84 aa12.77□□□□□ -0.37
ATG4B-226ENST00000625810 ZNF674Q2M3X9 581 aa12.77□□□□□ -0.37
ATG4B-226ENST00000625810 DAZ4Q86SG3 579 aaKnown RBP12.77□□□□□ -0.37
ATG4B-226ENST00000625810 TCEAL7Q9BRU2 100 aa12.77□□□□□ -0.37
ATG4B-226ENST00000625810 DAZ3Q9NR90 486 aaKnown RBP12.77□□□□□ -0.37
ATG4B-226ENST00000625810 TRBV6-1A0A0K0K1D8 114 aa12.76□□□□□ -0.37
ATG4B-226ENST00000625810 FAM229AH3BQW9 127 aa12.76□□□□□ -0.37
ATG4B-226ENST00000625810 SFRP2Q96HF1 295 aa12.76□□□□□ -0.37
ATG4B-226ENST00000625810 URGCP-MRPS24S4R325 110 aa12.76□□□□□ -0.37
ATG4B-226ENST00000625810 SMLR1H3BR10 107 aa12.75□□□□□ -0.37
ATG4B-226ENST00000625810 PAGE4O60829 102 aa12.75□□□□□ -0.37
ATG4B-226ENST00000625810 LTAP01374 205 aa12.75□□□□□ -0.37
ATG4B-226ENST00000625810 LINC01559Q495D7 138 aa12.75□□□□□ -0.37
ATG4B-226ENST00000625810 ZFP82Q8N141 532 aa12.75□□□□□ -0.37
ATG4B-226ENST00000625810 SFT2D1Q8WV19 159 aa12.74□□□□□ -0.37
ATG4B-226ENST00000625810 DNAH8Q96JB1 4490 aa12.73□□□□□ -0.37
ATG4B-226ENST00000625810 LECT2O14960 151 aa12.73□□□□□ -0.37
ATG4B-226ENST00000625810 SEC11BP0C7V7 166 aa12.73□□□□□ -0.37
ATG4B-226ENST00000625810 WFDC2Q14508 124 aa12.73□□□□□ -0.37
ATG4B-226ENST00000625810 FAM213BQ8TBF2 198 aa12.73□□□□□ -0.37
ATG4B-226ENST00000625810 COX11Q9Y6N1 276 aa12.73□□□□□ -0.37
ATG4B-226ENST00000625810 FLG2Q5D862 2391 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-226ENST00000625810 A0A1B0GV50 99 aa12.72□□□□□ -0.37
ATG4B-226ENST00000625810 RPL36AP83881 106 aaKnown RBP12.72□□□□□ -0.37
ATG4B-226ENST00000625810 KCNRGQ8N5I3 272 aa12.72□□□□□ -0.37
ATG4B-226ENST00000625810 RPL36ALQ969Q0 106 aaKnown RBP12.72□□□□□ -0.37
ATG4B-226ENST00000625810 RMI2Q96E14 147 aa12.72□□□□□ -0.37
ATG4B-226ENST00000625810 PFDN1O60925 122 aa12.71□□□□□ -0.37
ATG4B-226ENST00000625810 S100A9P06702 114 aaKnown RBP12.71□□□□□ -0.37
ATG4B-226ENST00000625810 ZNF345Q14585 488 aa12.71□□□□□ -0.37
ATG4B-226ENST00000625810 KCNIP4Q6PIL6 250 aa12.71□□□□□ -0.37
ATG4B-226ENST00000625810 NIT1Q86X76 327 aa12.71□□□□□ -0.37
ATG4B-226ENST00000625810 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-226ENST00000625810 A0A087WX48 190 aa12.7□□□□□ -0.38
ATG4B-226ENST00000625810 TRBV10-1A0A0K0K1A3 114 aa12.7□□□□□ -0.38
ATG4B-226ENST00000625810 UMAD1C9J7I0 102 aa12.7□□□□□ -0.38
ATG4B-226ENST00000625810 MBD3L1Q8WWY6 194 aa12.7□□□□□ -0.38
ATG4B-226ENST00000625810 BAALCQ8WXS3 180 aa12.7□□□□□ -0.38
ATG4B-226ENST00000625810 FAM30AQ9NZY2 134 aa12.7□□□□□ -0.38
ATG4B-226ENST00000625810 KLK12Q9UKR0 248 aa12.7□□□□□ -0.38
ATG4B-226ENST00000625810 IGKV2D-24A0A075B6R9 120 aa12.69□□□□□ -0.38
ATG4B-226ENST00000625810 C1QBP02746 253 aa12.69□□□□□ -0.38
ATG4B-226ENST00000625810 BAGE2Q86Y30 109 aa12.69□□□□□ -0.38
ATG4B-226ENST00000625810 ZNF471Q9BX82 626 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-226ENST00000625810 TRBV7-3A0A075B6L6 115 aa12.68□□□□□ -0.38
ATG4B-226ENST00000625810 A0A0D9SG52 128 aa12.68□□□□□ -0.38
ATG4B-226ENST00000625810 SCO2A0A1W2PP80 73 aa12.68□□□□□ -0.38
ATG4B-226ENST00000625810 KANTRA0A1W2PQU2 76 aa12.68□□□□□ -0.38
ATG4B-226ENST00000625810 RPL19P84098 196 aaKnown RBP12.68□□□□□ -0.38
ATG4B-226ENST00000625810 ELOBQ15370 118 aa12.68□□□□□ -0.38
ATG4B-226ENST00000625810 UBE2WQ96B02 151 aa12.68□□□□□ -0.38
ATG4B-226ENST00000625810 UBE2D3P61077 147 aa12.67□□□□□ -0.38
ATG4B-226ENST00000625810 UBE2D2P62837 147 aa12.67□□□□□ -0.38
ATG4B-226ENST00000625810 ZNF56Q15929 161 aa12.67□□□□□ -0.38
ATG4B-226ENST00000625810 CHCHD7Q9BUK0 85 aa12.67□□□□□ -0.38
ATG4B-226ENST00000625810 HMSDA8MTL9 139 aa12.66□□□□□ -0.38
ATG4B-226ENST00000625810 TMEM262E9PQX1 116 aa12.66□□□□□ -0.38
ATG4B-226ENST00000625810 H2AFB1P0C5Y9 115 aa12.66□□□□□ -0.38
ATG4B-226ENST00000625810 RAB4BP61018 213 aa12.66□□□□□ -0.38
ATG4B-226ENST00000625810 EIF5AP63241 154 aaKnown RBP12.66□□□□□ -0.38
ATG4B-226ENST00000625810 PRR27Q6MZM9 219 aa12.66□□□□□ -0.38
ATG4B-226ENST00000625810 OR10AG1Q8NH19 301 aa12.66□□□□□ -0.38
ATG4B-226ENST00000625810 RBFOX3A6NFN3 312 aa12.65□□□□□ -0.38
ATG4B-226ENST00000625810 BCL2L11O43521 198 aa12.65□□□□□ -0.38
ATG4B-226ENST00000625810 CXCL1P09341 107 aa12.65□□□□□ -0.38
ATG4B-226ENST00000625810 SPANXN1Q5VSR9 72 aa12.65□□□□□ -0.38
ATG4B-226ENST00000625810 Q8N976 141 aa12.65□□□□□ -0.38
ATG4B-226ENST00000625810 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-226ENST00000625810 DNAJC30Q96LL9 226 aa12.65□□□□□ -0.38
ATG4B-226ENST00000625810 MLST8Q9BVC4 326 aa12.65□□□□□ -0.38
ATG4B-226ENST00000625810 MUC21A0A0G2JKD1 596 aa12.64□□□□□ -0.39
ATG4B-226ENST00000625810 MUC21A0A140T8X8 626 aa12.64□□□□□ -0.39
ATG4B-226ENST00000625810 SSTP61278 116 aa12.64□□□□□ -0.39
ATG4B-226ENST00000625810 TMUB2Q71RG4 321 aa12.64□□□□□ -0.39
ATG4B-226ENST00000625810 OR10G8Q8NGN5 311 aa12.64□□□□□ -0.39
ATG4B-226ENST00000625810 F5H697 171 aa12.63□□□□□ -0.39
ATG4B-226ENST00000625810 Q0VG73 95 aa12.63□□□□□ -0.39
ATG4B-226ENST00000625810 NEXN-AS1Q8NBZ9 246 aa12.63□□□□□ -0.39
ATG4B-226ENST00000625810 TRBV6-8A0A0A6YYG3 113 aa12.62□□□□□ -0.39
ATG4B-226ENST00000625810 SNAI2O43623 268 aa12.62□□□□□ -0.39
ATG4B-226ENST00000625810 SSBP4Q9BWG4 385 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-226ENST00000625810 OR5AL1P0C617 328 aa12.61□□□□□ -0.39
ATG4B-226ENST00000625810 SMIM17P0DL12 118 aa12.61□□□□□ -0.39
ATG4B-226ENST00000625810 LINC01620Q4KN68 170 aa12.61□□□□□ -0.39
ATG4B-226ENST00000625810 Q6ZSA8 131 aa12.61□□□□□ -0.39
ATG4B-226ENST00000625810 CRPP02741 224 aa12.6□□□□□ -0.39
ATG4B-226ENST00000625810 PLA2G1BP04054 148 aaKnown RBP12.6□□□□□ -0.39
ATG4B-226ENST00000625810 RPL35P42766 123 aaKnown RBP12.6□□□□□ -0.39
ATG4B-226ENST00000625810 C15orf54Q8N8G6 183 aa12.6□□□□□ -0.39
ATG4B-226ENST00000625810 CHCHD5Q9BSY4 110 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms