RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 SNRPGP15A8MWD9 76 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 RGS5O15539 181 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 PSCAO43653 123 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 IGHV3-30P01768 117 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 IGHV3-33P01772 117 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 IGHV3-30-3P0DP02 117 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 IGHV3-30-5P0DP03 117 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 EVI2AP22794 236 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 RCVRNP35243 200 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 CBX5P45973 191 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 TAS2R46P59540 309 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 RHOBP62745 196 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 SSBP1Q04837 148 aaKnown RBP1.81□□□□□ -2.12
CDKL5-208ENST00000624953 ERCC8Q13216 396 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 BTN1A1Q13410 526 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 RAB31Q13636 194 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 IDNKQ5T6J7 187 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 OR13C8Q8NGS7 320 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 MCFD2Q8NI22 146 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 BLNKQ8WV28 456 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 RPUSD4Q96CM3 377 aaKnown RBP1.81□□□□□ -2.12
CDKL5-208ENST00000624953 S100A16Q96FQ6 103 aaKnown RBP1.81□□□□□ -2.12
CDKL5-208ENST00000624953 RNF185Q96GF1 192 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 RTBDNQ9BSG5 229 aaPredicted RBP1.81□□□□□ -2.12
CDKL5-208ENST00000624953 SHANK2-AS3Q9BTD1 123 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 TMEM222Q9H0R3 208 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 DIABLOQ9NR28 239 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 MCUBQ9NWR8 336 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 HHLA3Q9XRX5 114 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 C7orf71A4D174 169 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 NAP1L6A6NFF2 107 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 CEBPZOSA8MTT3 80 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 H3BQ15 152 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 M0R3E3 92 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 PITX3O75364 302 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 GCGP01275 180 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 CD3DP04234 171 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 LINC00694P0DN24 101 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 IGLC2P0DOY2 106 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 ORM2P19652 201 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 TBPP20226 339 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 S100GP29377 79 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 SRIP30626 198 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 CIRBPQ14011 172 aaKnown RBP1.8□□□□□ -2.12
CDKL5-208ENST00000624953 UBE2NLQ5JXB2 153 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 IBA57Q5T440 356 aaKnown RBP1.8□□□□□ -2.12
CDKL5-208ENST00000624953 TRIQKQ629K1 86 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 LPCAT3Q6P1A2 487 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 LINC00173Q6ZV60 143 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 DAZ4Q86SG3 579 aaKnown RBP1.8□□□□□ -2.12
CDKL5-208ENST00000624953 MTURNQ8N3F0 131 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 C10orf126Q8N4M7 172 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 ZFAND2AQ8N6M9 145 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 OR10P1Q8NGE3 313 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 OR10G4Q8NGN3 311 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 DTD1Q8TEA8 209 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 ASB13Q8WXK3 278 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 RBPMSQ93062 196 aaKnown RBP1.8□□□□□ -2.12
CDKL5-208ENST00000624953 LINC00477Q96M19 166 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 PACRGQ96M98 296 aaPredicted RBP1.8□□□□□ -2.12
CDKL5-208ENST00000624953 PDCD10Q9BUL8 212 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 ENY2Q9NPA8 101 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.8□□□□□ -2.12
CDKL5-208ENST00000624953 CACFD1Q9UGQ2 172 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 U3KQ87 197 aa1.8□□□□□ -2.12
CDKL5-208ENST00000624953 TRAV5A0A0B4J249 113 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 A0A0J9YXV3 536 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 RBFOX3A6NFN3 312 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 CRYM-AS1A6NIL9 109 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 FAM25AB3EWG3 89 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 FAM25CB3EWG5 89 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 FAM25GB3EWG6 89 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 RAB3DO95716 219 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 ORM1P02763 201 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 CHTF8P0CG12 524 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 IAPPP10997 89 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 PRSS3P35030 304 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 CAV2P51636 162 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 FGF8P55075 233 aaPredicted RBP1.79□□□□□ -2.12
CDKL5-208ENST00000624953 VBP1P61758 197 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 CACNG7P62955 275 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 RPL18AQ02543 176 aaKnown RBP1.79□□□□□ -2.12
CDKL5-208ENST00000624953 ZNF266Q14584 549 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 C4orf26Q17RF5 130 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 COX19Q49B96 90 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 SAMD13Q5VXD3 122 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 DPPA3Q6W0C5 159 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 SDIM1Q6ZPB5 146 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 LYZL2Q7Z4W2 148 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 S100A7AQ86SG5 101 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 SNX29P2Q8IUI4 249 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 LGI3Q8N145 548 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 EIF4E3Q8N5X7 224 aaKnown RBP1.79□□□□□ -2.12
CDKL5-208ENST00000624953 Q8N9L7 120 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 ZNF680Q8NEM1 530 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 DYNC2LI1Q8TCX1 351 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 DIRAS2Q96HU8 199 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 GPR82Q96P67 336 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 ODF3Q96PU9 254 aa1.79□□□□□ -2.12
CDKL5-208ENST00000624953 AGPAT4-IT1Q9H0P7 198 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms