RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 TRBV7-3A0A075B6L6 115 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 TEX48A0A1B0GUV7 120 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 IGLV1-40P01703 118 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 ATP5G2Q06055 141 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 RRN3P1Q2M238 152 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 CD300EQ496F6 205 aaPredicted RBP13.3□□□□□ -0.28
PCF11-207ENST00000624931 MAPKAPK5-AS1Q8N8E1 139 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 SCGB3A1Q96QR1 104 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 TTTY13Q9BZ97 58 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 K7ERJ3 54 aa13.29□□□□□ -0.28
PCF11-207ENST00000624931 OVOL1O14753 267 aa13.29□□□□□ -0.28
PCF11-207ENST00000624931 CIDEAO60543 219 aa13.29□□□□□ -0.28
PCF11-207ENST00000624931 IGHV3-11P01762 117 aa13.29□□□□□ -0.28
PCF11-207ENST00000624931 SPANXB1Q9NS25 103 aaPredicted RBP13.29□□□□□ -0.28
PCF11-207ENST00000624931 TRAV21A0A0B4J279 112 aa13.28□□□□□ -0.28
PCF11-207ENST00000624931 TMEM238LA0A1B0GVL6 79 aa13.28□□□□□ -0.28
PCF11-207ENST00000624931 A6NJY4 79 aa13.28□□□□□ -0.28
PCF11-207ENST00000624931 TRBV12-3P01733 135 aa13.28□□□□□ -0.28
PCF11-207ENST00000624931 DPH3P1Q9H4G8 78 aa13.28□□□□□ -0.28
PCF11-207ENST00000624931 ZNF580Q9UK33 172 aa13.28□□□□□ -0.28
PCF11-207ENST00000624931 IGHV3OR16-8A0A075B7F1 116 aa13.27□□□□□ -0.28
PCF11-207ENST00000624931 TRBV7-9A0A0J9YWB2 115 aa13.27□□□□□ -0.28
PCF11-207ENST00000624931 FAM223BA6NKX1 122 aa13.27□□□□□ -0.28
PCF11-207ENST00000624931 SUMO2P61956 95 aaKnown RBP13.27□□□□□ -0.28
PCF11-207ENST00000624931 FAM223AQ8IWN6 122 aa13.27□□□□□ -0.28
PCF11-207ENST00000624931 C16orf92Q96LL3 132 aa13.27□□□□□ -0.28
PCF11-207ENST00000624931 H3BUA1 57 aa13.27□□□□□ -0.29
PCF11-207ENST00000624931 GAGE13Q4V321 117 aa13.27□□□□□ -0.29
PCF11-207ENST00000624931 PAPPA-AS1Q5QFB9 102 aa13.27□□□□□ -0.29
PCF11-207ENST00000624931 Q6ZSV7 163 aa13.27□□□□□ -0.29
PCF11-207ENST00000624931 Q8N2B8 174 aa13.27□□□□□ -0.29
PCF11-207ENST00000624931 NEXN-AS1Q8NBZ9 246 aa13.27□□□□□ -0.29
PCF11-207ENST00000624931 SETXQ7Z333 2677 aaKnown RBP13.25□□□□□ -0.29
PCF11-207ENST00000624931 PSMB8P28062 276 aa13.25□□□□□ -0.29
PCF11-207ENST00000624931 ASIPP42127 132 aa13.25□□□□□ -0.29
PCF11-207ENST00000624931 RPL32P62910 135 aaKnown RBP13.25□□□□□ -0.29
PCF11-207ENST00000624931 OR10J6PQ8NGY7 276 aa13.25□□□□□ -0.29
PCF11-207ENST00000624931 GLMPQ8WWB7 406 aa13.25□□□□□ -0.29
PCF11-207ENST00000624931 TRAV26-2A0A0B4J265 109 aa13.25□□□□□ -0.29
PCF11-207ENST00000624931 H3BVH4 76 aa13.25□□□□□ -0.29
PCF11-207ENST00000624931 LYRM7Q5U5X0 104 aa13.25□□□□□ -0.29
PCF11-207ENST00000624931 HIST2H2BDQ6DRA6 164 aa13.25□□□□□ -0.29
PCF11-207ENST00000624931 SPATA25Q9BR10 227 aa13.25□□□□□ -0.29
PCF11-207ENST00000624931 CUBNO60494 3623 aa13.24□□□□□ -0.29
PCF11-207ENST00000624931 BRI3O95415 125 aa13.24□□□□□ -0.29
PCF11-207ENST00000624931 ZNF418Q8TF45 676 aaPredicted RBP13.24□□□□□ -0.29
PCF11-207ENST00000624931 FN1P02751 2386 aaKnown RBP13.23□□□□□ -0.29
PCF11-207ENST00000624931 IGHV3-66A0A0C4DH42 116 aa13.23□□□□□ -0.29
PCF11-207ENST00000624931 GAGE12HA6NDE8 117 aa13.23□□□□□ -0.29
PCF11-207ENST00000624931 S100A4P26447 101 aaKnown RBP13.23□□□□□ -0.29
PCF11-207ENST00000624931 HILS1P60008 231 aa13.23□□□□□ -0.29
PCF11-207ENST00000624931 SCGB2A2Q13296 93 aa13.23□□□□□ -0.29
PCF11-207ENST00000624931 POM121L12Q8N7R1 296 aa13.23□□□□□ -0.29
PCF11-207ENST00000624931 ATP6V0E2Q8NHE4 81 aa13.23□□□□□ -0.29
PCF11-207ENST00000624931 RNASE1P07998 156 aaKnown RBP13.22□□□□□ -0.29
PCF11-207ENST00000624931 WFDC2Q14508 124 aa13.22□□□□□ -0.29
PCF11-207ENST00000624931 RASL10AQ92737 203 aa13.22□□□□□ -0.29
PCF11-207ENST00000624931 USMG5Q96IX5 58 aa13.22□□□□□ -0.29
PCF11-207ENST00000624931 NSD1Q96L73 2696 aaPredicted RBP13.22□□□□□ -0.29
PCF11-207ENST00000624931 ARL3P36405 182 aa13.22□□□□□ -0.29
PCF11-207ENST00000624931 PHLDA3Q9Y5J5 127 aa13.22□□□□□ -0.29
PCF11-207ENST00000624931 NDUFA4O00483 81 aa13.21□□□□□ -0.3
PCF11-207ENST00000624931 LGALS1P09382 135 aaKnown RBP13.21□□□□□ -0.3
PCF11-207ENST00000624931 AZU1P20160 251 aa13.21□□□□□ -0.3
PCF11-207ENST00000624931 HERVK_113P61574 105 aa13.21□□□□□ -0.3
PCF11-207ENST00000624931 C2orf66Q6UXQ4 117 aa13.21□□□□□ -0.3
PCF11-207ENST00000624931 APRG1Q8IVJ8 170 aa13.21□□□□□ -0.3
PCF11-207ENST00000624931 ZFAND2AQ8N6M9 145 aa13.21□□□□□ -0.3
PCF11-207ENST00000624931 SELENOKQ9Y6D0 94 aa13.21□□□□□ -0.3
PCF11-207ENST00000624931 H3BMG7 143 aa13.2□□□□□ -0.3
PCF11-207ENST00000624931 BAALCQ8WXS3 180 aa13.2□□□□□ -0.3
PCF11-207ENST00000624931 PRO0461Q9UI25 63 aa13.2□□□□□ -0.3
PCF11-207ENST00000624931 F8P00451 2351 aa13.19□□□□□ -0.3
PCF11-207ENST00000624931 C18orf65Q6ZTR6 163 aa13.19□□□□□ -0.3
PCF11-207ENST00000624931 VCX2Q9H322 139 aa13.19□□□□□ -0.3
PCF11-207ENST00000624931 TSSC4Q9Y5U2 329 aaPredicted RBP13.19□□□□□ -0.3
PCF11-207ENST00000624931 PRSS29PA6NIE9 313 aa13.19□□□□□ -0.3
PCF11-207ENST00000624931 FAM19A4Q96LR4 140 aa13.19□□□□□ -0.3
PCF11-207ENST00000624931 PRADC1Q9BSG0 188 aa13.19□□□□□ -0.3
PCF11-207ENST00000624931 IGHV4OR15-8A0A075B7B6 117 aa13.18□□□□□ -0.3
PCF11-207ENST00000624931 A0A087WW49 117 aa13.18□□□□□ -0.3
PCF11-207ENST00000624931 TMEM89A2RUT3 159 aa13.18□□□□□ -0.3
PCF11-207ENST00000624931 NXPH4O95158 308 aa13.18□□□□□ -0.3
PCF11-207ENST00000624931 TCTEX1D4Q5JR98 221 aa13.18□□□□□ -0.3
PCF11-207ENST00000624931 DLX4Q92988 240 aaPredicted RBP13.18□□□□□ -0.3
PCF11-207ENST00000624931 TMEM141Q96I45 108 aa13.18□□□□□ -0.3
PCF11-207ENST00000624931 SPAG8Q99932 426 aaPredicted RBP13.18□□□□□ -0.3
PCF11-207ENST00000624931 CYSLTR1Q9Y271 337 aa13.18□□□□□ -0.3
PCF11-207ENST00000624931 IGHV3OR16-13A0A075B7E8 117 aa13.17□□□□□ -0.3
PCF11-207ENST00000624931 IGHV3-49A0A0A0MS15 119 aa13.17□□□□□ -0.3
PCF11-207ENST00000624931 IGHV3-74A0A0B4J1X5 117 aa13.17□□□□□ -0.3
PCF11-207ENST00000624931 ELANEP08246 267 aa13.17□□□□□ -0.3
PCF11-207ENST00000624931 PRR9Q5T870 116 aa13.17□□□□□ -0.3
PCF11-207ENST00000624931 UNQ9165/PRO28630Q6UXU0 137 aa13.17□□□□□ -0.3
PCF11-207ENST00000624931 A0A1B0GV72 72 aa13.16□□□□□ -0.3
PCF11-207ENST00000624931 ZNF815PA8K554 130 aa13.16□□□□□ -0.3
PCF11-207ENST00000624931 SOCS3O14543 225 aa13.16□□□□□ -0.3
PCF11-207ENST00000624931 ETDBQ3ZM63 59 aa13.16□□□□□ -0.3
PCF11-207ENST00000624931 C20orf173Q96LM9 149 aa13.16□□□□□ -0.3
PCF11-207ENST00000624931 NF1P21359 2839 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms