RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 IGKV3-20P01619 116 aa6.2□□□□□ -1.42
SND1-IT1-201ENST00000623342 DUX5Q96PT3 197 aa6.2□□□□□ -1.42
SND1-IT1-201ENST00000623342 CSTL1Q9H114 145 aa6.2□□□□□ -1.42
SND1-IT1-201ENST00000623342 HIGD1BQ9P298 99 aa6.2□□□□□ -1.42
SND1-IT1-201ENST00000623342 F8VRH5 84 aa6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 CDKN1BP46527 198 aa6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 RPL32P62910 135 aaKnown RBP6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 C2orf66Q6UXQ4 117 aa6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 OR4C5Q8NGB2 326 aa6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 C9orf85Q96MD7 179 aa6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 MUC4Q99102 2169 aa6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 TRAV12-2A0A075B6T6 113 aa6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 IGHV3-16A0A0C4DH30 117 aa6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 H3BRM9 83 aa6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 FOSL1P15407 271 aa6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 LCE2DQ5TA82 110 aaPredicted RBP6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 AMMECR1LQ6DCA0 310 aa6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 SUMO4Q6EEV6 95 aa6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 NEXN-AS1Q8NBZ9 246 aa6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 JPT2Q9H910 190 aa6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 CHTOPQ9Y3Y2 248 aaKnown RBP6.19□□□□□ -1.42
SND1-IT1-201ENST00000623342 SPINK13Q1W4C9 94 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 FOXI2Q6ZQN5 318 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 Q8N2B8 174 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 SYT8Q8NBV8 401 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 TTTY13Q9BZ97 58 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 SORL1Q92673 2214 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 IGHV1OR15-1A0A075B7D0 117 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 A0A087WWL8 130 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 TRAV8-6A0A0B4J262 113 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 F5H697 171 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 TCTEX1D4Q5JR98 221 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 BAALCQ8WXS3 180 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 Q96MF0 132 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 CHAC1Q9BUX1 264 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 MDFICQ9P1T7 246 aa6.18□□□□□ -1.42
SND1-IT1-201ENST00000623342 SETXQ7Z333 2677 aaKnown RBP6.17□□□□□ -1.42
SND1-IT1-201ENST00000623342 TRBV25-1A0A075B6N4 114 aa6.17□□□□□ -1.42
SND1-IT1-201ENST00000623342 C9orf118A6NHY6 69 aa6.17□□□□□ -1.42
SND1-IT1-201ENST00000623342 POLR2KP53803 58 aaKnown RBP6.17□□□□□ -1.42
SND1-IT1-201ENST00000623342 Q8N1Y9 231 aa6.17□□□□□ -1.42
SND1-IT1-201ENST00000623342 FLNBO75369 2602 aaKnown RBP6.17□□□□□ -1.42
SND1-IT1-201ENST00000623342 LINC01549A6NIU2 74 aa6.17□□□□□ -1.42
SND1-IT1-201ENST00000623342 VCYO14598 125 aa6.17□□□□□ -1.42
SND1-IT1-201ENST00000623342 SLURP1P55000 103 aa6.17□□□□□ -1.42
SND1-IT1-201ENST00000623342 AMTNQ6UX39 209 aa6.17□□□□□ -1.42
SND1-IT1-201ENST00000623342 NEGR1Q7Z3B1 354 aa6.17□□□□□ -1.42
SND1-IT1-201ENST00000623342 CYSLTR1Q9Y271 337 aa6.17□□□□□ -1.42
SND1-IT1-201ENST00000623342 WNK1Q9H4A3 2382 aa6.16□□□□□ -1.42
SND1-IT1-201ENST00000623342 K7EP13 123 aa6.16□□□□□ -1.42
SND1-IT1-201ENST00000623342 DEFB136Q30KP8 78 aa6.16□□□□□ -1.42
SND1-IT1-201ENST00000623342 C18orf65Q6ZTR6 163 aa6.16□□□□□ -1.42
SND1-IT1-201ENST00000623342 KIR2DL4Q99706 377 aa6.16□□□□□ -1.42
SND1-IT1-201ENST00000623342 TRBV6-5A0A0K0K1A5 114 aa6.16□□□□□ -1.42
SND1-IT1-201ENST00000623342 PRSS29PA6NIE9 313 aa6.16□□□□□ -1.42
SND1-IT1-201ENST00000623342 LINC01619G3V211 115 aa6.16□□□□□ -1.42
SND1-IT1-201ENST00000623342 GCSHP23434 173 aa6.16□□□□□ -1.42
SND1-IT1-201ENST00000623342 FAM74A4Q5TZK3 123 aa6.16□□□□□ -1.42
SND1-IT1-201ENST00000623342 ZFP2Q6ZN57 461 aa6.16□□□□□ -1.42
SND1-IT1-201ENST00000623342 MAPKAPK5-AS1Q8N8E1 139 aa6.16□□□□□ -1.42
SND1-IT1-201ENST00000623342 VWFP04275 2813 aa6.15□□□□□ -1.42
SND1-IT1-201ENST00000623342 TRGV11A0A075B6L2 103 aa6.15□□□□□ -1.42
SND1-IT1-201ENST00000623342 SDHAF1A6NFY7 115 aa6.15□□□□□ -1.42
SND1-IT1-201ENST00000623342 HIST2H2BDQ6DRA6 164 aa6.15□□□□□ -1.42
SND1-IT1-201ENST00000623342 KRTAP1-3Q8IUG1 177 aa6.15□□□□□ -1.42
SND1-IT1-201ENST00000623342 PEMTQ9UBM1 199 aa6.15□□□□□ -1.42
SND1-IT1-201ENST00000623342 TP53TG1Q9Y2A0 90 aa6.15□□□□□ -1.42
SND1-IT1-201ENST00000623342 TRBV27A0A0K0K1C4 114 aa6.15□□□□□ -1.43
SND1-IT1-201ENST00000623342 OR11H12B2RN74 326 aa6.15□□□□□ -1.43
SND1-IT1-201ENST00000623342 H3BUT2 72 aa6.15□□□□□ -1.43
SND1-IT1-201ENST00000623342 CRYGDP07320 174 aa6.15□□□□□ -1.43
SND1-IT1-201ENST00000623342 SMIM13P0DJ93 91 aa6.15□□□□□ -1.43
SND1-IT1-201ENST00000623342 FXYD2P54710 66 aa6.15□□□□□ -1.43
SND1-IT1-201ENST00000623342 ZNF56Q15929 161 aa6.15□□□□□ -1.43
SND1-IT1-201ENST00000623342 OR11H1Q8NG94 326 aa6.15□□□□□ -1.43
SND1-IT1-201ENST00000623342 OR11H2Q8NH07 326 aa6.15□□□□□ -1.43
SND1-IT1-201ENST00000623342 C4orf3Q8WVX3 66 aa6.15□□□□□ -1.43
SND1-IT1-201ENST00000623342 RAB37Q96AX2 223 aa6.15□□□□□ -1.43
SND1-IT1-201ENST00000623342 TM2D2Q9BX73 214 aa6.15□□□□□ -1.43
SND1-IT1-201ENST00000623342 TENM1Q9UKZ4 2725 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 TRAV2A0A0B4J234 112 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 GAGE10A6NGK3 116 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 IGIPA6NJ69 53 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 KNCNA6PVL3 124 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 M0QY20 66 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 DEFB131AP59861 70 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 TAL2Q16559 108 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 CEND1Q8N111 149 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 TMEM141Q96I45 108 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 TSHBP01222 138 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 RIPPLY3P57055 190 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 ZNF876PQ49A33 203 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 GTF2H5Q6ZYL4 71 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 TRPT1Q86TN4 253 aaKnown RBP6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 TMEM86BQ8N661 226 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 JMJD8Q96S16 334 aa6.14□□□□□ -1.43
SND1-IT1-201ENST00000623342 MYMXA0A1B0GTQ4 84 aa6.13□□□□□ -1.43
SND1-IT1-201ENST00000623342 A8MTW9 85 aa6.13□□□□□ -1.43
SND1-IT1-201ENST00000623342 E9PLD3 99 aa6.13□□□□□ -1.43
SND1-IT1-201ENST00000623342 RBMY1A1P0DJD3 496 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms