RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ST20Q9HBF5 79 aa12.03□□□□□ -0.48
LDB3-208ENST00000623007 UQCR10Q9UDW1 63 aa12.03□□□□□ -0.48
LDB3-208ENST00000623007 SONP18583 2426 aaKnown RBP12.03□□□□□ -0.48
LDB3-208ENST00000623007 A8MWV9 139 aa12.03□□□□□ -0.48
LDB3-208ENST00000623007 TRPT1Q86TN4 253 aaKnown RBP12.03□□□□□ -0.48
LDB3-208ENST00000623007 EDA2RQ9HAV5 297 aa12.03□□□□□ -0.48
LDB3-208ENST00000623007 MDFICQ9P1T7 246 aa12.03□□□□□ -0.48
LDB3-208ENST00000623007 MYO9AB2RTY4 2548 aa12.02□□□□□ -0.48
LDB3-208ENST00000623007 TRBV6-5A0A0K0K1A5 114 aa12.02□□□□□ -0.49
LDB3-208ENST00000623007 M0R2P5 195 aa12.02□□□□□ -0.49
LDB3-208ENST00000623007 ZNF876PQ49A33 203 aa12.02□□□□□ -0.49
LDB3-208ENST00000623007 RASL10AQ92737 203 aa12.02□□□□□ -0.49
LDB3-208ENST00000623007 BEAN1Q3B7T3 259 aa12.01□□□□□ -0.49
LDB3-208ENST00000623007 MORN3Q6PF18 240 aaPredicted RBP12.01□□□□□ -0.49
LDB3-208ENST00000623007 LINC01587Q99440 93 aa12.01□□□□□ -0.49
LDB3-208ENST00000623007 TRAV26-2A0A0B4J265 109 aa12□□□□□ -0.49
LDB3-208ENST00000623007 RBMY1BA6NDE4 496 aaKnown RBP12□□□□□ -0.49
LDB3-208ENST00000623007 RBMY1EA6NEQ0 496 aaKnown RBP12□□□□□ -0.49
LDB3-208ENST00000623007 VCYO14598 125 aa12□□□□□ -0.49
LDB3-208ENST00000623007 RBMY1DP0C7P1 496 aaKnown RBP12□□□□□ -0.49
LDB3-208ENST00000623007 GATA1P15976 413 aaPredicted RBP12□□□□□ -0.49
LDB3-208ENST00000623007 LINC00315P59091 139 aa12□□□□□ -0.49
LDB3-208ENST00000623007 AKAP9Q99996 3911 aa12□□□□□ -0.49
LDB3-208ENST00000623007 F5H697 171 aa12□□□□□ -0.49
LDB3-208ENST00000623007 RHODO00212 210 aa12□□□□□ -0.49
LDB3-208ENST00000623007 KIR2DL4Q99706 377 aa12□□□□□ -0.49
LDB3-208ENST00000623007 GAS8-AS1O95177 125 aa11.99□□□□□ -0.49
LDB3-208ENST00000623007 NUDT3O95989 172 aa11.99□□□□□ -0.49
LDB3-208ENST00000623007 LINC00173Q6ZV60 143 aa11.99□□□□□ -0.49
LDB3-208ENST00000623007 TMEM158Q8WZ71 300 aa11.99□□□□□ -0.49
LDB3-208ENST00000623007 ZNF469Q96JG9 3925 aaPredicted RBP11.99□□□□□ -0.49
LDB3-208ENST00000623007 FXYD7P58549 80 aa11.98□□□□□ -0.49
LDB3-208ENST00000623007 LINC00482Q8N8I6 264 aa11.98□□□□□ -0.49
LDB3-208ENST00000623007 TMEM208Q9BTX3 173 aa11.98□□□□□ -0.49
LDB3-208ENST00000623007 GOLT1BQ9Y3E0 138 aa11.98□□□□□ -0.49
LDB3-208ENST00000623007 CRYGDP07320 174 aa11.97□□□□□ -0.49
LDB3-208ENST00000623007 IGLC3P0DOY3 106 aa11.97□□□□□ -0.49
LDB3-208ENST00000623007 ZNF56Q15929 161 aa11.97□□□□□ -0.49
LDB3-208ENST00000623007 SUMO4Q6EEV6 95 aa11.97□□□□□ -0.49
LDB3-208ENST00000623007 C14orf144Q96I85 54 aa11.97□□□□□ -0.49
LDB3-208ENST00000623007 MCRIP2Q9BUT9 160 aaKnown RBP11.97□□□□□ -0.49
LDB3-208ENST00000623007 RBMY1A1P0DJD3 496 aaKnown RBP11.97□□□□□ -0.49
LDB3-208ENST00000623007 RBMY1CP0DJD4 496 aa11.97□□□□□ -0.49
LDB3-208ENST00000623007 RBMY1FQ15415 496 aaKnown RBP11.97□□□□□ -0.49
LDB3-208ENST00000623007 C9orf66Q5T8R8 295 aa11.97□□□□□ -0.49
LDB3-208ENST00000623007 PMCHL2Q9BQD1 86 aa11.97□□□□□ -0.49
LDB3-208ENST00000623007 MUC4Q99102 2169 aa11.96□□□□□ -0.5
LDB3-208ENST00000623007 ACANP16112 2415 aa11.96□□□□□ -0.5
LDB3-208ENST00000623007 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.96□□□□□ -0.5
LDB3-208ENST00000623007 POLR2KP53803 58 aaKnown RBP11.96□□□□□ -0.5
LDB3-208ENST00000623007 ZNF124Q15973 351 aa11.96□□□□□ -0.5
LDB3-208ENST00000623007 TOMM6Q96B49 74 aa11.96□□□□□ -0.5
LDB3-208ENST00000623007 CSTL1Q9H114 145 aa11.96□□□□□ -0.5
LDB3-208ENST00000623007 A0A087WWL8 130 aa11.95□□□□□ -0.5
LDB3-208ENST00000623007 TRBV27A0A0K0K1C4 114 aa11.95□□□□□ -0.5
LDB3-208ENST00000623007 FAM74A4Q5TZK3 123 aa11.95□□□□□ -0.5
LDB3-208ENST00000623007 RPL39LQ96EH5 51 aaKnown RBP11.95□□□□□ -0.5
LDB3-208ENST00000623007 OTOGQ6ZRI0 2925 aa11.95□□□□□ -0.5
LDB3-208ENST00000623007 H0Y8G0 127 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 M0QY20 66 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 CIDEAO60543 219 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 PRSS1P07477 247 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 IGLL1P15814 213 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 RHOHQ15669 191 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 ATOH7Q8N100 152 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 AGRNO00468 2067 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 TRAV12-1A0A0B4J245 112 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 M0R143 59 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 HTN1P15515 57 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 CTAG1AP78358 180 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 ZFP2Q6ZN57 461 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 Q6ZN92 141 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 GTSCR1Q86UQ5 136 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 C11orf72Q8NBR9 251 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 TMEM263Q8WUH6 116 aaKnown RBP11.94□□□□□ -0.5
LDB3-208ENST00000623007 CYSLTR1Q9Y271 337 aa11.94□□□□□ -0.5
LDB3-208ENST00000623007 SPRY2O43597 315 aa11.93□□□□□ -0.5
LDB3-208ENST00000623007 HIST2H2BDQ6DRA6 164 aa11.93□□□□□ -0.5
LDB3-208ENST00000623007 XCL2Q9UBD3 114 aa11.93□□□□□ -0.5
LDB3-208ENST00000623007 MRPS16Q9Y3D3 137 aaKnown RBP11.93□□□□□ -0.5
LDB3-208ENST00000623007 SDHAF1A6NFY7 115 aa11.92□□□□□ -0.5
LDB3-208ENST00000623007 HNRNPA3P51991 378 aaKnown RBP11.92□□□□□ -0.5
LDB3-208ENST00000623007 KRTAP10-3P60369 221 aa11.92□□□□□ -0.5
LDB3-208ENST00000623007 DNAJC30Q96LL9 226 aa11.92□□□□□ -0.5
LDB3-208ENST00000623007 CITED1Q99966 193 aa11.92□□□□□ -0.5
LDB3-208ENST00000623007 C19orf73Q9NVV2 129 aa11.92□□□□□ -0.5
LDB3-208ENST00000623007 ERASQ7Z444 233 aa11.91□□□□□ -0.5
LDB3-208ENST00000623007 C16orf74Q96GX8 76 aa11.91□□□□□ -0.5
LDB3-208ENST00000623007 C18orf15Q96N68 181 aa11.91□□□□□ -0.5
LDB3-208ENST00000623007 SCGB3A1Q96QR1 104 aa11.91□□□□□ -0.5
LDB3-208ENST00000623007 JPT2Q9H910 190 aa11.91□□□□□ -0.5
LDB3-208ENST00000623007 I3L3M4 83 aa11.91□□□□□ -0.5
LDB3-208ENST00000623007 PLNP26678 52 aa11.91□□□□□ -0.5
LDB3-208ENST00000623007 RIPPLY3P57055 190 aa11.91□□□□□ -0.5
LDB3-208ENST00000623007 SLC25A34Q6PIV7 304 aa11.91□□□□□ -0.5
LDB3-208ENST00000623007 C2orf66Q6UXQ4 117 aa11.91□□□□□ -0.5
LDB3-208ENST00000623007 C1orf158Q8N1D5 194 aa11.91□□□□□ -0.5
LDB3-208ENST00000623007 TMEM141Q96I45 108 aa11.91□□□□□ -0.5
LDB3-208ENST00000623007 ZMAT4Q9H898 229 aa11.91□□□□□ -0.5
LDB3-208ENST00000623007 ODF1Q14990 250 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms