RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	GAGE12J	A6NER3	117 aa		10.88	□□□□□ -0.67
SYNRG-231	ENST00000622045	GAGE7	O76087	117 aa		10.88	□□□□□ -0.67
SYNRG-231	ENST00000622045	GAGE12F	P0CL80	117 aa		10.88	□□□□□ -0.67
SYNRG-231	ENST00000622045	GAGE12G	P0CL81	117 aa		10.88	□□□□□ -0.67
SYNRG-231	ENST00000622045	GAGE12I	P0CL82	117 aa		10.88	□□□□□ -0.67
SYNRG-231	ENST00000622045	GAGE4	Q13068	117 aa		10.88	□□□□□ -0.67
SYNRG-231	ENST00000622045	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.88	□□□□□ -0.67	3e-6	■■■■□ 26.3
SYNRG-231	ENST00000622045	VCX2	Q9H322	139 aa		10.88	□□□□□ -0.67
SYNRG-231	ENST00000622045	CREBBP	Q92793	2442 aa		10.88	□□□□□ -0.67
SYNRG-231	ENST00000622045	TRBV7-9	A0A0J9YWB2	115 aa		10.87	□□□□□ -0.67
SYNRG-231	ENST00000622045	ELANE	P08246	267 aa		10.87	□□□□□ -0.67
SYNRG-231	ENST00000622045	MRPL53	Q96EL3	112 aa	Known RBP	10.87	□□□□□ -0.67
SYNRG-231	ENST00000622045	TEX49	A0A1B0GTD5	131 aa		10.87	□□□□□ -0.67
SYNRG-231	ENST00000622045	RHOD	O00212	210 aa		10.87	□□□□□ -0.67
SYNRG-231	ENST00000622045	GNRH2	O43555	120 aa		10.87	□□□□□ -0.67
SYNRG-231	ENST00000622045	UBE2E1	P51965	193 aa		10.87	□□□□□ -0.67
SYNRG-231	ENST00000622045	TCF15	Q12870	199 aa		10.87	□□□□□ -0.67
SYNRG-231	ENST00000622045	IGLV4-69	A0A075B6H9	119 aa		10.87	□□□□□ -0.67
SYNRG-231	ENST00000622045	TSHB	P01222	138 aa		10.87	□□□□□ -0.67
SYNRG-231	ENST00000622045	C9orf139	Q6ZV77	190 aa		10.87	□□□□□ -0.67
SYNRG-231	ENST00000622045		Q8N1Y9	231 aa		10.87	□□□□□ -0.67
SYNRG-231	ENST00000622045		F5H697	171 aa		10.86	□□□□□ -0.67
SYNRG-231	ENST00000622045	FAM159A	Q6UWV7	190 aa		10.86	□□□□□ -0.67
SYNRG-231	ENST00000622045	LINC00477	Q96M19	166 aa		10.86	□□□□□ -0.67
SYNRG-231	ENST00000622045	SBSPON	Q8IVN8	264 aa		10.86	□□□□□ -0.67
SYNRG-231	ENST00000622045	OPRPN	Q99935	248 aa	Predicted RBP	10.86	□□□□□ -0.67
SYNRG-231	ENST00000622045	IGHV4-4	A0A075B6R2	117 aa		10.86	□□□□□ -0.67
SYNRG-231	ENST00000622045	IFITM1	P13164	125 aa		10.86	□□□□□ -0.67
SYNRG-231	ENST00000622045	LGALS3	P17931	250 aa	Known RBP	10.86	□□□□□ -0.67
SYNRG-231	ENST00000622045	C20orf173	Q96LM9	149 aa		10.86	□□□□□ -0.67
SYNRG-231	ENST00000622045	SIRPD	Q9H106	197 aa		10.86	□□□□□ -0.67
SYNRG-231	ENST00000622045	JPT2	Q9H910	190 aa		10.86	□□□□□ -0.67
SYNRG-231	ENST00000622045		F6UB75	175 aa		10.85	□□□□□ -0.67
SYNRG-231	ENST00000622045	RNF223	E7ERA6	249 aa		10.85	□□□□□ -0.67
SYNRG-231	ENST00000622045	IGHV3-11	P01762	117 aa		10.85	□□□□□ -0.67
SYNRG-231	ENST00000622045	C15orf53	Q8NAA6	179 aa		10.85	□□□□□ -0.67
SYNRG-231	ENST00000622045	SLC25A29	Q8N8R3	303 aa		10.85	□□□□□ -0.67
SYNRG-231	ENST00000622045	TRAV41	A0A0B4J266	112 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045	CENPVL3	A0A0U1RRI6	287 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045	EIF4EBP3	O60516	100 aa	Predicted RBP	10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045	UBTD1	Q9HAC8	227 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045	BSN	Q9UPA5	3926 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045		J3QQQ9	107 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045	SRD5A1	P18405	259 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045	FBXL19-AS1	Q494R0	122 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045	ZNRF2	Q8NHG8	242 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045		A0A087WWL8	130 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045	ADARB2-AS1	A8MUL3	147 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045	SPG11	Q96JI7	2443 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045	TRAV8-4	A0A0B4J246	113 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045		K7ENP7	123 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045	PMVK	Q15126	192 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045	CFAP161	Q6P656	301 aa		10.84	□□□□□ -0.67
SYNRG-231	ENST00000622045	UNQ9165/PRO28630	Q6UXU0	137 aa		10.83	□□□□□ -0.68
SYNRG-231	ENST00000622045	OVOL1	O14753	267 aa		10.83	□□□□□ -0.68
SYNRG-231	ENST00000622045	IGHV3-33	P01772	117 aa		10.83	□□□□□ -0.68
SYNRG-231	ENST00000622045	RPL32	P62910	135 aa	Known RBP	10.83	□□□□□ -0.68
SYNRG-231	ENST00000622045	MUSTN1	Q8IVN3	82 aa		10.83	□□□□□ -0.68
SYNRG-231	ENST00000622045	ZFAND2A	Q8N6M9	145 aa		10.83	□□□□□ -0.68
SYNRG-231	ENST00000622045	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.83	□□□□□ -0.68
SYNRG-231	ENST00000622045	LENEP	Q9Y5L5	61 aa		10.83	□□□□□ -0.68
SYNRG-231	ENST00000622045	C11orf71	Q6IPW1	123 aa		10.83	□□□□□ -0.68
SYNRG-231	ENST00000622045	NPFF	O15130	113 aa		10.82	□□□□□ -0.68
SYNRG-231	ENST00000622045	TRBV12-3	P01733	135 aa		10.82	□□□□□ -0.68
SYNRG-231	ENST00000622045	PPP1R17	O96001	155 aa		10.82	□□□□□ -0.68
SYNRG-231	ENST00000622045	LINC01620	Q4KN68	170 aa		10.81	□□□□□ -0.68
SYNRG-231	ENST00000622045	GPHB5	Q86YW7	130 aa		10.81	□□□□□ -0.68
SYNRG-231	ENST00000622045	ZNF580	Q9UK33	172 aa		10.81	□□□□□ -0.68
SYNRG-231	ENST00000622045		U3KQE9	123 aa		10.81	□□□□□ -0.68
SYNRG-231	ENST00000622045	PRSS2	P07478	247 aa		10.81	□□□□□ -0.68
SYNRG-231	ENST00000622045	NPC2	P61916	151 aa		10.81	□□□□□ -0.68
SYNRG-231	ENST00000622045	ADORA2A-AS1	P86434	159 aa		10.81	□□□□□ -0.68
SYNRG-231	ENST00000622045	FAM74A4	Q5TZK3	123 aa		10.81	□□□□□ -0.68
SYNRG-231	ENST00000622045	BPESC1	Q9GZL8	116 aa		10.81	□□□□□ -0.68
SYNRG-231	ENST00000622045	C5orf56	Q8N8D9	126 aa		10.81	□□□□□ -0.68
SYNRG-231	ENST00000622045	LY6E	Q16553	131 aa		10.8	□□□□□ -0.68
SYNRG-231	ENST00000622045	ODF3	Q96PU9	254 aa		10.8	□□□□□ -0.68
SYNRG-231	ENST00000622045	PF4V1	P10720	104 aa		10.8	□□□□□ -0.68
SYNRG-231	ENST00000622045	IGIP	A6NJ69	53 aa		10.8	□□□□□ -0.68
SYNRG-231	ENST00000622045	BRD3OS	Q6XYD6	125 aa		10.8	□□□□□ -0.68
SYNRG-231	ENST00000622045	MEIG1	Q5JSS6	88 aa		10.79	□□□□□ -0.68
SYNRG-231	ENST00000622045	TMEM263	Q8WUH6	116 aa	Known RBP	10.79	□□□□□ -0.68
SYNRG-231	ENST00000622045	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.79	□□□□□ -0.68
SYNRG-231	ENST00000622045	MOB4	Q9Y3A3	225 aa		10.79	□□□□□ -0.68
SYNRG-231	ENST00000622045	AMELX	Q99217	191 aa		10.79	□□□□□ -0.68
SYNRG-231	ENST00000622045	SORL1	Q92673	2214 aa		10.78	□□□□□ -0.68
SYNRG-231	ENST00000622045	FAM223B	A6NKX1	122 aa		10.78	□□□□□ -0.68
SYNRG-231	ENST00000622045	ATXN8	Q156A1	80 aa		10.78	□□□□□ -0.68
SYNRG-231	ENST00000622045	PAPPA-AS1	Q5QFB9	102 aa		10.78	□□□□□ -0.68
SYNRG-231	ENST00000622045	FAM223A	Q8IWN6	122 aa		10.78	□□□□□ -0.68
SYNRG-231	ENST00000622045	ZNF56	Q15929	161 aa		10.78	□□□□□ -0.68
SYNRG-231	ENST00000622045	C2orf82	Q6UX34	121 aa		10.78	□□□□□ -0.68
SYNRG-231	ENST00000622045	DUX3	Q96PT4	197 aa		10.78	□□□□□ -0.68
SYNRG-231	ENST00000622045	SDHAF1	A6NFY7	115 aa		10.77	□□□□□ -0.68
SYNRG-231	ENST00000622045		Q6ZSV7	163 aa		10.77	□□□□□ -0.68
SYNRG-231	ENST00000622045	CHCHD5	Q9BSY4	110 aa		10.77	□□□□□ -0.68
SYNRG-231	ENST00000622045	RHPN1-AS1	Q9BWJ2	59 aa		10.77	□□□□□ -0.68
SYNRG-231	ENST00000622045	MAP1A	P78559	2803 aa	Predicted RBP	10.77	□□□□□ -0.68
SYNRG-231	ENST00000622045		H3BMM0	161 aa		10.77	□□□□□ -0.69
SYNRG-231	ENST00000622045	RNASE3	P12724	160 aa	Known RBP	10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms