RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 CCL8P80075 99 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 RHOHQ15669 191 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 ARL17AQ8IVW1 177 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 MGST2Q99735 147 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 C20orf78Q9BR46 151 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 ST20Q9HBF5 79 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 MRPL35Q9NZE8 188 aaKnown RBP1.98□□□□□ -2.09
BRCA1-229ENST00000621897 PTPRMP28827 1452 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 NLRP1Q9C000 1473 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 TET3O43151 1660 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 TRPM7Q96QT4 1865 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 CFAP74Q9C0B2 1584 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 MAGI3Q5TCQ9 1506 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 TANC1Q9C0D5 1861 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 MYO16Q9Y6X6 1858 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 HMSDA8MTL9 139 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 H3BRM9 83 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 PSCAO43653 123 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 SEC11AP67812 179 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 RBM3P98179 157 aaKnown RBP1.97□□□□□ -2.09
BRCA1-229ENST00000621897 DEFA5Q01523 94 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 KRTAP25-1Q3LHN0 102 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 SLC48A1Q6P1K1 146 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 LINC00304Q8N9R0 145 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 OR8B3Q8NGG8 313 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 TMEM254Q8TBM7 123 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 S100ZQ8WXG8 99 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 SDK2Q58EX2 2172 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 KDM6BO15054 1643 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 ANKARQ7Z5J8 1434 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 LAMB2P55268 1798 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 ABCA8O94911 1581 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 KNDC1Q76NI1 1749 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 MGAMO43451 1857 aa1.97□□□□□ -2.09
BRCA1-229ENST00000621897 PRR14LQ5THK1 2151 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 PATJQ8NI35 1801 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 CASP8AP2Q9UKL3 1982 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 SHANK2Q9UPX8 1470 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 ARHGAP32A7KAX9 2087 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 MYO18AQ92614 2054 aaKnown RBP1.96□□□□□ -2.1
BRCA1-229ENST00000621897 TRAV10A0A0B4J240 114 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 A0A0J9YX75 114 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 NAP1L6A6NFF2 107 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 ODF3BA8MYP8 253 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 ERC2-IT1O76042 136 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 ADIRFQ15847 76 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 C9orf116Q5BN46 136 aaPredicted RBP1.96□□□□□ -2.1
BRCA1-229ENST00000621897 SPINT4Q6UDR6 99 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 ZCCHC23Q6ZST2 131 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 PPDPFLQ8WWR9 84 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 TRGV9Q99603 122 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 CLTCQ00610 1675 aaKnown RBP1.96□□□□□ -2.1
BRCA1-229ENST00000621897 FREM3P0C091 2139 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 NUMA1Q14980 2115 aa1.96□□□□□ -2.1
BRCA1-229ENST00000621897 NINQ8N4C6 2090 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 MUC22E2RYF6 1773 aaPredicted RBP1.95□□□□□ -2.1
BRCA1-229ENST00000621897 LRP5O75197 1615 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 MROH1Q8NDA8 1641 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 MYO3AQ8NEV4 1616 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 GOLGA3Q08378 1498 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 NRXN1Q9ULB1 1477 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 IGKV3D-11A0A0A0MRZ8 115 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 TRBV10-3A0A0K0K1G6 114 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 TCRBV4S1A1TA0A5B7 111 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 NDUFC1O43677 76 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 IGLC2P0DOY2 106 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 IGLC3P0DOY3 106 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 FAUP35544 74 aaKnown RBP1.95□□□□□ -2.1
BRCA1-229ENST00000621897 KIAA2026Q5HYC2 2103 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 S100A7L2Q5SY68 101 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 KRTAP26-1Q6PEX3 210 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 C2orf82Q6UX34 121 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 SERP2Q8N6R1 65 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 HIGD2AQ9BW72 106 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 CYP4F30PQ9H0H9 118 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 CACFD1Q9UGQ2 172 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 PSORS1C2Q9UIG4 136 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 LHFPL6Q9Y693 200 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 SPCS1Q9Y6A9 102 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 ABCA10Q8WWZ4 1543 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 UGGT2Q9NYU1 1516 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 SCN11AQ9UI33 1791 aa1.95□□□□□ -2.1
BRCA1-229ENST00000621897 ATP10BO94823 1461 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 COL11A1P12107 1806 aaPredicted RBP1.94□□□□□ -2.1
BRCA1-229ENST00000621897 LTBP2Q14767 1821 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 KIF21AQ7Z4S6 1674 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 TRAV12-1A0A0B4J245 112 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 TRAV17A0A0B4J275 112 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 A0A1W2PPM0 123 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 CCL16O15467 120 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 CXCL8P10145 99 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 UBE2G1P62253 170 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 MIR22HGQ0VDD5 57 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 DEFB113Q30KQ7 82 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 ZNF791Q3KP31 576 aaPredicted RBP1.94□□□□□ -2.1
BRCA1-229ENST00000621897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.94□□□□□ -2.1
BRCA1-229ENST00000621897 ZNF833PQ6ZTB9 187 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 FAM213BQ8TBF2 198 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 LINC00474Q9P2X8 69 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 IQGAP3Q86VI3 1631 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms