RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 SFRP2Q96HF1 295 aa12.36□□□□□ -0.43
SCAMP4-213ENST00000621748 TPPP3Q9BW30 176 aa12.36□□□□□ -0.43
SCAMP4-213ENST00000621748 ICOSQ9Y6W8 199 aa12.36□□□□□ -0.43
SCAMP4-213ENST00000621748 M0R2P5 195 aa12.35□□□□□ -0.43
SCAMP4-213ENST00000621748 MT-ND4LP03901 98 aa12.35□□□□□ -0.43
SCAMP4-213ENST00000621748 ARMS2P0C7Q2 107 aa12.35□□□□□ -0.43
SCAMP4-213ENST00000621748 RPL19P84098 196 aaKnown RBP12.35□□□□□ -0.43
SCAMP4-213ENST00000621748 TRGV4A0A0C4DH28 118 aa12.34□□□□□ -0.43
SCAMP4-213ENST00000621748 A0A1W2PPQ1 181 aa12.34□□□□□ -0.43
SCAMP4-213ENST00000621748 H3BVH4 76 aa12.34□□□□□ -0.43
SCAMP4-213ENST00000621748 IL36BQ9NZH7 164 aa12.34□□□□□ -0.43
SCAMP4-213ENST00000621748 F2Z2F3 143 aa12.33□□□□□ -0.44
SCAMP4-213ENST00000621748 MED14OSP0DP75 135 aa12.33□□□□□ -0.44
SCAMP4-213ENST00000621748 ZNF876PQ49A33 203 aa12.33□□□□□ -0.44
SCAMP4-213ENST00000621748 DNLZQ5SXM8 178 aa12.33□□□□□ -0.44
SCAMP4-213ENST00000621748 SPANXN1Q5VSR9 72 aa12.33□□□□□ -0.44
SCAMP4-213ENST00000621748 FER1L6-AS1Q8NA97 138 aa12.33□□□□□ -0.44
SCAMP4-213ENST00000621748 LRP1BQ9NZR2 4599 aa12.32□□□□□ -0.44
SCAMP4-213ENST00000621748 MRPL23Q16540 153 aaKnown RBP12.32□□□□□ -0.44
SCAMP4-213ENST00000621748 CT83Q5H943 113 aa12.32□□□□□ -0.44
SCAMP4-213ENST00000621748 TTC32Q5I0X7 151 aa12.32□□□□□ -0.44
SCAMP4-213ENST00000621748 ZFP82Q8N141 532 aa12.32□□□□□ -0.44
SCAMP4-213ENST00000621748 TRAV4A0A0B4J268 109 aa12.31□□□□□ -0.44
SCAMP4-213ENST00000621748 LYPD5Q6UWN5 251 aa12.31□□□□□ -0.44
SCAMP4-213ENST00000621748 ZNF575Q86XF7 245 aa12.31□□□□□ -0.44
SCAMP4-213ENST00000621748 SLC7A5P1Q8MH63 180 aa12.31□□□□□ -0.44
SCAMP4-213ENST00000621748 ANAPC16Q96DE5 110 aa12.31□□□□□ -0.44
SCAMP4-213ENST00000621748 RYR1P21817 5038 aa12.31□□□□□ -0.44
SCAMP4-213ENST00000621748 K7EQD1 137 aa12.3□□□□□ -0.44
SCAMP4-213ENST00000621748 M0R381 172 aa12.3□□□□□ -0.44
SCAMP4-213ENST00000621748 GZMBP10144 247 aa12.3□□□□□ -0.44
SCAMP4-213ENST00000621748 RNASE3P12724 160 aaKnown RBP12.3□□□□□ -0.44
SCAMP4-213ENST00000621748 CACNG7P62955 275 aa12.3□□□□□ -0.44
SCAMP4-213ENST00000621748 OR4C5Q8NGB2 326 aa12.3□□□□□ -0.44
SCAMP4-213ENST00000621748 C9orf85Q96MD7 179 aa12.3□□□□□ -0.44
SCAMP4-213ENST00000621748 SIVA1O15304 175 aa12.29□□□□□ -0.44
SCAMP4-213ENST00000621748 NXPH4O95158 308 aa12.29□□□□□ -0.44
SCAMP4-213ENST00000621748 APOC3P02656 99 aa12.29□□□□□ -0.44
SCAMP4-213ENST00000621748 OR5AL1P0C617 328 aa12.29□□□□□ -0.44
SCAMP4-213ENST00000621748 GYPEP15421 78 aa12.29□□□□□ -0.44
SCAMP4-213ENST00000621748 SSTP61278 116 aa12.29□□□□□ -0.44
SCAMP4-213ENST00000621748 SMIM15Q7Z3B0 74 aa12.29□□□□□ -0.44
SCAMP4-213ENST00000621748 NEGR1Q7Z3B1 354 aa12.29□□□□□ -0.44
SCAMP4-213ENST00000621748 TSKUQ8WUA8 353 aa12.29□□□□□ -0.44
SCAMP4-213ENST00000621748 PTH2Q96A98 100 aa12.29□□□□□ -0.44
SCAMP4-213ENST00000621748 GFRA4Q9GZZ7 299 aa12.29□□□□□ -0.44
SCAMP4-213ENST00000621748 FAM231BA6NCW3 169 aa12.28□□□□□ -0.44
SCAMP4-213ENST00000621748 SMIM17P0DL12 118 aa12.28□□□□□ -0.44
SCAMP4-213ENST00000621748 SVBPQ8N300 66 aa12.28□□□□□ -0.44
SCAMP4-213ENST00000621748 CARHSP1Q9Y2V2 147 aaKnown RBP12.28□□□□□ -0.44
SCAMP4-213ENST00000621748 A8MWV9 139 aa12.27□□□□□ -0.45
SCAMP4-213ENST00000621748 SNAPINO95295 136 aa12.27□□□□□ -0.45
SCAMP4-213ENST00000621748 ADCYAP1P18509 176 aa12.27□□□□□ -0.45
SCAMP4-213ENST00000621748 PIK3CD-AS1Q5SR53 167 aa12.27□□□□□ -0.45
SCAMP4-213ENST00000621748 LYZL1Q6UWQ5 148 aa12.27□□□□□ -0.45
SCAMP4-213ENST00000621748 PGLYRP4Q96LB8 373 aa12.27□□□□□ -0.45
SCAMP4-213ENST00000621748 CTDSP1Q9GZU7 261 aa12.27□□□□□ -0.45
SCAMP4-213ENST00000621748 NAT8BQ9UHF3 227 aa12.27□□□□□ -0.45
SCAMP4-213ENST00000621748 V9GYV3 84 aa12.27□□□□□ -0.45
SCAMP4-213ENST00000621748 DNAH5Q8TE73 4624 aa12.27□□□□□ -0.45
SCAMP4-213ENST00000621748 HSPG2P98160 4391 aa12.26□□□□□ -0.45
SCAMP4-213ENST00000621748 LOC100131303A0A0U1RQF7 123 aa12.26□□□□□ -0.45
SCAMP4-213ENST00000621748 CIDEAO60543 219 aa12.26□□□□□ -0.45
SCAMP4-213ENST00000621748 SRIP30626 198 aa12.26□□□□□ -0.45
SCAMP4-213ENST00000621748 C10orf91Q5T1B1 145 aa12.26□□□□□ -0.45
SCAMP4-213ENST00000621748 SNAI2O43623 268 aa12.25□□□□□ -0.45
SCAMP4-213ENST00000621748 IGLC6P0CF74 106 aa12.25□□□□□ -0.45
SCAMP4-213ENST00000621748 GATA1P15976 413 aaPredicted RBP12.25□□□□□ -0.45
SCAMP4-213ENST00000621748 BTF3P20290 206 aaKnown RBP12.25□□□□□ -0.45
SCAMP4-213ENST00000621748 LINC00315P59091 139 aa12.25□□□□□ -0.45
SCAMP4-213ENST00000621748 RHEBQ15382 184 aa12.25□□□□□ -0.45
SCAMP4-213ENST00000621748 TWIST1Q15672 202 aa12.25□□□□□ -0.45
SCAMP4-213ENST00000621748 WDR73Q6P4I2 378 aa12.25□□□□□ -0.45
SCAMP4-213ENST00000621748 KCNIP4Q6PIL6 250 aa12.25□□□□□ -0.45
SCAMP4-213ENST00000621748 SSBP4Q9BWG4 385 aaPredicted RBP12.25□□□□□ -0.45
SCAMP4-213ENST00000621748 SCRT2Q9NQ03 307 aa12.25□□□□□ -0.45
SCAMP4-213ENST00000621748 PCLOQ9Y6V0 5065 aa12.25□□□□□ -0.45
SCAMP4-213ENST00000621748 MUC21A0A0G2JKD1 596 aa12.24□□□□□ -0.45
SCAMP4-213ENST00000621748 MUC21A0A140T8X8 626 aa12.24□□□□□ -0.45
SCAMP4-213ENST00000621748 HIGD1CA8MV81 97 aa12.24□□□□□ -0.45
SCAMP4-213ENST00000621748 RS1O15537 224 aa12.24□□□□□ -0.45
SCAMP4-213ENST00000621748 TRGC1P0CF51 173 aa12.24□□□□□ -0.45
SCAMP4-213ENST00000621748 S100PP25815 95 aa12.24□□□□□ -0.45
SCAMP4-213ENST00000621748 RIGQ13278 110 aa12.24□□□□□ -0.45
SCAMP4-213ENST00000621748 CFAP126Q5VTH2 177 aa12.24□□□□□ -0.45
SCAMP4-213ENST00000621748 CLRN3Q8NCR9 226 aa12.24□□□□□ -0.45
SCAMP4-213ENST00000621748 OR10AG1Q8NH19 301 aa12.24□□□□□ -0.45
SCAMP4-213ENST00000621748 AP1S3Q96PC3 154 aa12.24□□□□□ -0.45
SCAMP4-213ENST00000621748 KRTAP17-1Q9BYP8 105 aa12.24□□□□□ -0.45
SCAMP4-213ENST00000621748 RPS10P5Q9NQ39 176 aa12.24□□□□□ -0.45
SCAMP4-213ENST00000621748 RHODO00212 210 aa12.23□□□□□ -0.45
SCAMP4-213ENST00000621748 DMRTA1Q5VZB9 504 aa12.23□□□□□ -0.45
SCAMP4-213ENST00000621748 TNFRSF18Q9Y5U5 241 aa12.23□□□□□ -0.45
SCAMP4-213ENST00000621748 A0A1B0GUT8 65 aa12.22□□□□□ -0.45
SCAMP4-213ENST00000621748 C16orf90A8MZG2 172 aa12.22□□□□□ -0.45
SCAMP4-213ENST00000621748 CTRLP40313 264 aa12.22□□□□□ -0.45
SCAMP4-213ENST00000621748 FOXA3P55318 350 aaPredicted RBP12.22□□□□□ -0.45
SCAMP4-213ENST00000621748 Q6ZRN7 208 aaPredicted RBP12.22□□□□□ -0.45
SCAMP4-213ENST00000621748 WFDC10BQ8IUB3 73 aa12.22□□□□□ -0.45
SCAMP4-213ENST00000621748 SLC25A29Q8N8R3 303 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms