RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 CAMLGP49069 296 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 RAB5CP51148 216 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 CAV2P51636 162 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 TAS2R19P59542 299 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 RANP62826 216 aaKnown RBP1.33□□□□□ -2.2
CPNE3-211ENST00000621526 SLC38A11Q08AI6 406 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 GAGE2BQ13066 116 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 SS18Q15532 418 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 KRTAP19-6Q3LI70 58 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 SCGB2B2Q4G0G5 96 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 FAM229BQ4G0N7 80 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 LINC00242Q5T6M2 205 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 PHF5AQ7RTV0 110 aaKnown RBP1.33□□□□□ -2.2
CPNE3-211ENST00000621526 LINC00304Q8N9R0 145 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 ISOC2Q96AB3 205 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 CARD19Q96LW7 228 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 AQP10Q96PS8 301 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 MGST2Q99735 147 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 KRTAP9-8Q9BYQ0 159 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 PSENENQ9NZ42 101 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 IL36BQ9NZH7 164 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 OR5AC2Q9NZP5 309 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 CCDC59Q9P031 241 aaKnown RBP1.33□□□□□ -2.2
CPNE3-211ENST00000621526 C11orf21Q9P2W6 132 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 EXTL2Q9UBQ6 330 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 FLVCR2Q9UPI3 526 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 PSG8Q9UQ74 426 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 PHLDA3Q9Y5J5 127 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 KMT2DO14686 5537 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 MUC12Q9UKN1 5478 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 FLGP20930 4061 aaPredicted RBP1.32□□□□□ -2.2
CPNE3-211ENST00000621526 IGLV4-69A0A075B6H9 119 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 IGHV1-24A0A0C4DH33 117 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 SERTM2A0A1B0GWG4 89 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 FABP5P3A8MUU1 101 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 DISC1C4P0D8 188 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 F8WDY8 70 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 ZNF561-AS1K7EIQ3 104 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 CTDSP2O14595 271 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 LCE2BO14633 110 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 NUPR1O60356 82 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 TSC22D2O75157 780 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 APOMO95445 188 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 KRTAP2-3P0C7H8 128 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 PYYP10082 97 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 ESDP10768 282 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 S100A4P26447 101 aaKnown RBP1.32□□□□□ -2.2
CPNE3-211ENST00000621526 SULT1A2P50226 295 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 GABARAPL2P60520 117 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 RPL18AQ02543 176 aaKnown RBP1.32□□□□□ -2.2
CPNE3-211ENST00000621526 GAGE6Q13070 117 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 TMEM241Q24JQ0 296 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 ZFP69Q49AA0 526 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 HIGD2BQ4VC39 106 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 TMEM128Q5BJH2 165 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 FAM74A1Q5RGS3 127 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 SAPCD1Q5SSQ6 148 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 NRARPQ7Z6K4 114 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 KRTAP11-1Q8IUC1 163 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 SAMD12Q8N8I0 201 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 NEXN-AS1Q8NBZ9 246 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 FXYD5Q96DB9 178 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 FAM167A-AS1Q96KT0 104 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 PRRT1Q99946 306 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 DERL1Q9BUN8 251 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 KRTAP2-4Q9BYR9 128 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 NMES1Q9C002 83 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 C11orf1Q9H5F2 150 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 JPT2Q9H910 190 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 RSL24D1Q9UHA3 163 aaKnown RBP1.32□□□□□ -2.2
CPNE3-211ENST00000621526 WDR83OSQ9Y284 106 aa1.32□□□□□ -2.2
CPNE3-211ENST00000621526 IGLV4-60A0A075B6I1 120 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 IGKV3D-20A0A0C4DH25 116 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 C19orf71A6NCJ1 209 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.31□□□□□ -2.2
CPNE3-211ENST00000621526 H3BP45 60 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 MBPP02686 304 aaPredicted RBP1.31□□□□□ -2.2
CPNE3-211ENST00000621526 ARMS2P0C7Q2 107 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 METTL15P1P0C7V9 234 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 S100A11P31949 105 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 RPS19P39019 145 aaKnown RBP1.31□□□□□ -2.2
CPNE3-211ENST00000621526 RPL28P46779 137 aaKnown RBP1.31□□□□□ -2.2
CPNE3-211ENST00000621526 ZNF80P51504 273 aaPredicted RBP1.31□□□□□ -2.2
CPNE3-211ENST00000621526 RRAS2P62070 204 aaPredicted RBP1.31□□□□□ -2.2
CPNE3-211ENST00000621526 MRPS10P82664 201 aaKnown RBP1.31□□□□□ -2.2
CPNE3-211ENST00000621526 MEF2BQ02080 365 aaPredicted RBP1.31□□□□□ -2.2
CPNE3-211ENST00000621526 ARL16Q0P5N6 197 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 FOXI1Q12951 378 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 IL18Q14116 193 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 ATP6V1FQ16864 119 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 IAH1Q2TAA2 248 aaPredicted RBP1.31□□□□□ -2.2
CPNE3-211ENST00000621526 KRTAP13-2Q52LG2 175 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 SMUG1Q53HV7 270 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 MIC13Q5XKP0 118 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 CLPSL2Q6UWE3 100 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 PRNTQ86SH4 94 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 SNX29P2Q8IUI4 249 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 CLVS1Q8IUQ0 354 aaPredicted RBP1.31□□□□□ -2.2
CPNE3-211ENST00000621526 DAND5Q8N907 189 aa1.31□□□□□ -2.2
CPNE3-211ENST00000621526 NUP35Q8NFH5 326 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms