RNA–Protein interactions for RNA: ENST00000621104.4

CCDC144B-209, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2

Gene CCDC144B, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-209ENST00000621104 C9orf116Q5BN46 136 aaPredicted RBP0.73□□□□□ -2.29
CCDC144B-209ENST00000621104 PPP1R1CQ8WVI7 109 aa0.73□□□□□ -2.29
CCDC144B-209ENST00000621104 SNRNP25Q9BV90 132 aaKnown RBP0.73□□□□□ -2.29
CCDC144B-209ENST00000621104 RERGLQ9H628 205 aa0.73□□□□□ -2.29
CCDC144B-209ENST00000621104 RPRMQ9NS64 109 aa0.73□□□□□ -2.29
CCDC144B-209ENST00000621104 CDK12Q9NYV4 1490 aaPredicted RBP0.73□□□□□ -2.29
CCDC144B-209ENST00000621104 NAIPQ13075 1403 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 NOTCH1P46531 2555 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 AKAP11Q9UKA4 1901 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 PLXNA2O75051 1894 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 TRAV12-3A0A0B4J271 114 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 LOC100130705A0A1B0GUX0 176 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 TCRBV3S1A0A5B6 114 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 FXYD1O00168 92 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 BTG2P78543 158 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 C10orf99Q6UWK7 81 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 CYP2G1PQ6ZSU1 146 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 C2orf88Q9BSF0 95 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 COA4Q9NYJ1 87 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 PTPRMP28827 1452 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 MYH7P12883 1935 aa0.72□□□□□ -2.29
CCDC144B-209ENST00000621104 TENM3Q9P273 2699 aa0.71□□□□□ -2.29
CCDC144B-209ENST00000621104 ESPL1Q14674 2120 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 KNTC1P50748 2209 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 FBN2P35556 2912 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 LINC00587B1AMM8 73 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 IFNA17P01571 189 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 AKAIN1P0CW23 69 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 CBLN1P23435 193 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 NPC2P61916 151 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 KLKP1Q107X0 134 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 S100A7L2Q5SY68 101 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 PLAC4Q8WY50 150 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 NAA60Q9H7X0 242 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 BET1LQ9NYM9 111 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 SERP1Q9Y6X1 66 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 NCOA3Q9Y6Q9 1424 aa0.71□□□□□ -2.3
CCDC144B-209ENST00000621104 DLEC1Q9Y238 1755 aa0.7□□□□□ -2.3
CCDC144B-209ENST00000621104 PP6455Q8WZ26 134 aa0.7□□□□□ -2.3
CCDC144B-209ENST00000621104 LSM10Q969L4 123 aaKnown RBP0.7□□□□□ -2.3
CCDC144B-209ENST00000621104 TMEM203Q969S6 136 aa0.7□□□□□ -2.3
CCDC144B-209ENST00000621104 SCN3BQ9NY72 215 aa0.7□□□□□ -2.3
CCDC144B-209ENST00000621104 DAPK1P53355 1430 aa0.7□□□□□ -2.3
CCDC144B-209ENST00000621104 BLMP54132 1417 aaPredicted RBP0.7□□□□□ -2.3
CCDC144B-209ENST00000621104 GPR98Q8WXG9 6306 aa0.7□□□□□ -2.3
CCDC144B-209ENST00000621104 AFDNP55196 1824 aaKnown RBP0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 FOCADQ5VW36 1801 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 CFTRP13569 1480 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 ZNF518AQ6AHZ1 1483 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 MBD5Q9P267 1494 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 PIGBOS1A0A0B4J2F0 54 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 RBAKDNA6NC62 111 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 MCRIP1C9JLW8 97 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 K7EIL1 84 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 ELOF1P60002 83 aaKnown RBP0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 SSBP1Q04837 148 aaKnown RBP0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 SPINK13Q1W4C9 94 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 Q56UQ5 140 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 Q6AWC8 147 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 C20orf197Q8N268 126 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 SPTSSBQ8NFR3 76 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 C10orf82Q8WW14 230 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 TMEM14BQ9NUH8 114 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 GNG8Q9UK08 70 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 SMG6Q86US8 1419 aaKnown RBP0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 PHLPP1O60346 1717 aa0.69□□□□□ -2.3
CCDC144B-209ENST00000621104 ABCA1O95477 2261 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 WDR7Q9Y4E6 1490 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 TRBV10-3A0A0K0K1G6 114 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 SPAARA0A1B0GVQ0 90 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 F6UZH7 168 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 APOC4-APOC2K7ER74 178 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 CORTO00230 105 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 LY6G6CO95867 125 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 IFNGP01579 166 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 APOC2P02655 101 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 CCL3L1P16619 93 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 FXYD6P3P58550 94 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 FAM74A4Q5TZK3 123 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 C12orf73Q69YU5 71 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 C4orf33Q8N1A6 199 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 LAMA4Q16363 1823 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 RREB1Q92766 1687 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 MED13LQ71F56 2210 aa0.68□□□□□ -2.3
CCDC144B-209ENST00000621104 SPEF2Q9C093 1822 aa0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 MIF4GDA9UHW6 222 aaKnown RBP0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 SNAPC5O75971 98 aa0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 SPINT3P49223 89 aa0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 UBE2D1P51668 147 aa0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 CCL8P80075 99 aa0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 MRPS10P82664 201 aaKnown RBP0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 RBM3P98179 157 aaKnown RBP0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 CATR1Q13166 79 aa0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 WHAMMP3Q1A5X7 153 aa0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 SPINK9Q5DT21 86 aa0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 ZNF818PQ6ZRF7 136 aa0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 Q8N8P6 123 aa0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 COX7B2Q8TF08 81 aa0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 DSCR8Q96T75 97 aa0.67□□□□□ -2.3
CCDC144B-209ENST00000621104 BCL9LQ86UU0 1499 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms