RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 LOC100131303A0A0U1RQF7 123 aa9.53□□□□□ -0.88
NEK3-210ENST00000620675 NUPR2A6NF83 97 aa9.53□□□□□ -0.88
NEK3-210ENST00000620675 F2Z2F3 143 aa9.53□□□□□ -0.88
NEK3-210ENST00000620675 C3orf84H3BNL1 204 aa9.53□□□□□ -0.88
NEK3-210ENST00000620675 EVI2AP22794 236 aa9.53□□□□□ -0.88
NEK3-210ENST00000620675 PIK3CD-AS1Q5SR53 167 aa9.53□□□□□ -0.88
NEK3-210ENST00000620675 GFRA4Q9GZZ7 299 aa9.53□□□□□ -0.88
NEK3-210ENST00000620675 KIF25-AS1Q9Y6Z4 181 aa9.53□□□□□ -0.88
NEK3-210ENST00000620675 A8MWV9 139 aa9.52□□□□□ -0.88
NEK3-210ENST00000620675 FAM3BP58499 235 aaPredicted RBP9.52□□□□□ -0.88
NEK3-210ENST00000620675 LINC00315P59091 139 aa9.52□□□□□ -0.88
NEK3-210ENST00000620675 TWIST1Q15672 202 aa9.52□□□□□ -0.88
NEK3-210ENST00000620675 CLRN3Q8NCR9 226 aa9.52□□□□□ -0.88
NEK3-210ENST00000620675 HYDINQ4G0P3 5121 aa9.52□□□□□ -0.89
NEK3-210ENST00000620675 MT-ND4LP03901 98 aa9.52□□□□□ -0.89
NEK3-210ENST00000620675 P0DMU3 169 aa9.52□□□□□ -0.89
NEK3-210ENST00000620675 FAM231AP0DMU4 169 aa9.52□□□□□ -0.89
NEK3-210ENST00000620675 FAM231CP0DMU5 169 aa9.52□□□□□ -0.89
NEK3-210ENST00000620675 GATA1P15976 413 aaPredicted RBP9.52□□□□□ -0.89
NEK3-210ENST00000620675 CRYBA4P53673 196 aa9.52□□□□□ -0.89
NEK3-210ENST00000620675 HHLA3Q9XRX5 114 aa9.52□□□□□ -0.89
NEK3-210ENST00000620675 C7orf77A4D0Y5 90 aa9.51□□□□□ -0.89
NEK3-210ENST00000620675 CACNG7P62955 275 aa9.51□□□□□ -0.89
NEK3-210ENST00000620675 SLC25A29Q8N8R3 303 aa9.51□□□□□ -0.89
NEK3-210ENST00000620675 NDUFAF3Q9BU61 184 aa9.51□□□□□ -0.89
NEK3-210ENST00000620675 APLNQ9ULZ1 77 aa9.51□□□□□ -0.89
NEK3-210ENST00000620675 FAM231BA6NCW3 169 aa9.51□□□□□ -0.89
NEK3-210ENST00000620675 ATRAIDQ6UW56 229 aa9.51□□□□□ -0.89
NEK3-210ENST00000620675 ANAPC16Q96DE5 110 aa9.51□□□□□ -0.89
NEK3-210ENST00000620675 NAT8BQ9UHF3 227 aa9.51□□□□□ -0.89
NEK3-210ENST00000620675 A0A1B0GUT8 65 aa9.5□□□□□ -0.89
NEK3-210ENST00000620675 PPP1R2P9O14990 202 aa9.5□□□□□ -0.89
NEK3-210ENST00000620675 AP1S3Q96PC3 154 aa9.5□□□□□ -0.89
NEK3-210ENST00000620675 PRO0255Q9UI72 69 aa9.5□□□□□ -0.89
NEK3-210ENST00000620675 PAX4O43316 350 aa9.49□□□□□ -0.89
NEK3-210ENST00000620675 MRPL54Q6P161 138 aaKnown RBP9.49□□□□□ -0.89
NEK3-210ENST00000620675 WDR73Q6P4I2 378 aa9.49□□□□□ -0.89
NEK3-210ENST00000620675 KLK5Q9Y337 293 aaPredicted RBP9.49□□□□□ -0.89
NEK3-210ENST00000620675 A0A096LPF7 62 aa9.49□□□□□ -0.89
NEK3-210ENST00000620675 NUDT3O95989 172 aa9.49□□□□□ -0.89
NEK3-210ENST00000620675 NDUFA5Q16718 116 aa9.49□□□□□ -0.89
NEK3-210ENST00000620675 ZFP2Q6ZN57 461 aa9.49□□□□□ -0.89
NEK3-210ENST00000620675 RPS10P5Q9NQ39 176 aa9.49□□□□□ -0.89
NEK3-210ENST00000620675 MGPP08493 103 aa9.48□□□□□ -0.89
NEK3-210ENST00000620675 ZNF56Q15929 161 aa9.48□□□□□ -0.89
NEK3-210ENST00000620675 GYPEP15421 78 aa9.47□□□□□ -0.89
NEK3-210ENST00000620675 URGCP-MRPS24S4R325 110 aa9.47□□□□□ -0.89
NEK3-210ENST00000620675 TRAV26-2A0A0B4J265 109 aa9.47□□□□□ -0.89
NEK3-210ENST00000620675 GAS8-AS1O95177 125 aa9.47□□□□□ -0.89
NEK3-210ENST00000620675 CAMPP49913 170 aa9.47□□□□□ -0.89
NEK3-210ENST00000620675 F5H697 171 aa9.46□□□□□ -0.89
NEK3-210ENST00000620675 K7EQD1 137 aa9.46□□□□□ -0.89
NEK3-210ENST00000620675 RHODO00212 210 aa9.46□□□□□ -0.89
NEK3-210ENST00000620675 RHEBQ15382 184 aa9.46□□□□□ -0.89
NEK3-210ENST00000620675 SVBPQ8N300 66 aa9.46□□□□□ -0.89
NEK3-210ENST00000620675 TRBV6-4A0A1B0GX49 114 aa9.46□□□□□ -0.9
NEK3-210ENST00000620675 A0A1B0GXF2 115 aa9.46□□□□□ -0.9
NEK3-210ENST00000620675 TRGC1P0CF51 173 aa9.46□□□□□ -0.9
NEK3-210ENST00000620675 SMIM17P0DL12 118 aa9.46□□□□□ -0.9
NEK3-210ENST00000620675 BORCS7Q96B45 105 aa9.46□□□□□ -0.9
NEK3-210ENST00000620675 CTDSP1Q9GZU7 261 aa9.46□□□□□ -0.9
NEK3-210ENST00000620675 DPH3P1Q9H4G8 78 aa9.46□□□□□ -0.9
NEK3-210ENST00000620675 RIGQ13278 110 aa9.45□□□□□ -0.9
NEK3-210ENST00000620675 SUMO4Q6EEV6 95 aa9.45□□□□□ -0.9
NEK3-210ENST00000620675 AMN1Q8IY45 258 aa9.45□□□□□ -0.9
NEK3-210ENST00000620675 RNF185Q96GF1 192 aa9.45□□□□□ -0.9
NEK3-210ENST00000620675 FAM210BQ96KR6 192 aa9.45□□□□□ -0.9
NEK3-210ENST00000620675 A0A087WWC5 75 aa9.44□□□□□ -0.9
NEK3-210ENST00000620675 SNAPINO95295 136 aa9.44□□□□□ -0.9
NEK3-210ENST00000620675 SLAQ13239 276 aa9.44□□□□□ -0.9
NEK3-210ENST00000620675 DNAH6Q9C0G6 4158 aa9.44□□□□□ -0.9
NEK3-210ENST00000620675 GAGE12JA6NER3 117 aa9.44□□□□□ -0.9
NEK3-210ENST00000620675 CIDEAO60543 219 aa9.44□□□□□ -0.9
NEK3-210ENST00000620675 RAB4BP61018 213 aa9.44□□□□□ -0.9
NEK3-210ENST00000620675 GAGE1Q13065 139 aa9.44□□□□□ -0.9
NEK3-210ENST00000620675 GAGE4Q13068 117 aa9.44□□□□□ -0.9
NEK3-210ENST00000620675 GAGE5Q13069 117 aa9.44□□□□□ -0.9
NEK3-210ENST00000620675 RHOHQ15669 191 aa9.44□□□□□ -0.9
NEK3-210ENST00000620675 GAGE13Q4V321 117 aa9.44□□□□□ -0.9
NEK3-210ENST00000620675 TMEM191AQ9H0A3 160 aa9.44□□□□□ -0.9
NEK3-210ENST00000620675 H3BNG1 76 aa9.43□□□□□ -0.9
NEK3-210ENST00000620675 M0QY20 66 aa9.43□□□□□ -0.9
NEK3-210ENST00000620675 C15orf53Q8NAA6 179 aa9.43□□□□□ -0.9
NEK3-210ENST00000620675 GATD1Q8NB37 220 aa9.43□□□□□ -0.9
NEK3-210ENST00000620675 NEXN-AS1Q8NBZ9 246 aa9.43□□□□□ -0.9
NEK3-210ENST00000620675 SMKR1H3BMG3 65 aa9.43□□□□□ -0.9
NEK3-210ENST00000620675 HBBP68871 147 aa9.43□□□□□ -0.9
NEK3-210ENST00000620675 ESRGQ1W209 222 aa9.43□□□□□ -0.9
NEK3-210ENST00000620675 TMEM242Q9NWH2 141 aa9.43□□□□□ -0.9
NEK3-210ENST00000620675 ICOSQ9Y6W8 199 aa9.43□□□□□ -0.9
NEK3-210ENST00000620675 LINC00694P0DN24 101 aa9.42□□□□□ -0.9
NEK3-210ENST00000620675 RAB4AP20338 218 aa9.42□□□□□ -0.9
NEK3-210ENST00000620675 RPL39LQ96EH5 51 aaKnown RBP9.42□□□□□ -0.9
NEK3-210ENST00000620675 IMMP2LQ96T52 175 aa9.42□□□□□ -0.9
NEK3-210ENST00000620675 PRADC1Q9BSG0 188 aa9.42□□□□□ -0.9
NEK3-210ENST00000620675 RYR2Q92736 4967 aa9.42□□□□□ -0.9
NEK3-210ENST00000620675 NCR2O95944 276 aa9.41□□□□□ -0.9
NEK3-210ENST00000620675 ZNRF2Q8NHG8 242 aa9.41□□□□□ -0.9
NEK3-210ENST00000620675 DEFB104AQ8WTQ1 72 aa9.41□□□□□ -0.9
NEK3-210ENST00000620675 SRIP30626 198 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms