RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 HIGD1BQ9P298 99 aa12.09□□□□□ -0.47
DKC1-213ENST00000620277 RNASE3P12724 160 aaKnown RBP12.09□□□□□ -0.47
DKC1-213ENST00000620277 FBXL19-AS1Q494R0 122 aa12.09□□□□□ -0.47
DKC1-213ENST00000620277 RAX2Q96IS3 184 aa12.09□□□□□ -0.47
DKC1-213ENST00000620277 PRRC2AP48634 2157 aaKnown RBP12.09□□□□□ -0.47
DKC1-213ENST00000620277 Q5PR19 223 aa12.09□□□□□ -0.47
DKC1-213ENST00000620277 FAM159AQ6UWV7 190 aa12.09□□□□□ -0.47
DKC1-213ENST00000620277 C1orf122Q6ZSJ8 110 aa12.09□□□□□ -0.47
DKC1-213ENST00000620277 GAGE12HA6NDE8 117 aa12.08□□□□□ -0.48
DKC1-213ENST00000620277 SPANXB1Q9NS25 103 aaPredicted RBP12.08□□□□□ -0.48
DKC1-213ENST00000620277 MOB4Q9Y3A3 225 aa12.08□□□□□ -0.48
DKC1-213ENST00000620277 ZNF56Q15929 161 aa12.08□□□□□ -0.48
DKC1-213ENST00000620277 RRN3P1Q2M238 152 aa12.08□□□□□ -0.48
DKC1-213ENST00000620277 ORMDL2Q53FV1 153 aa12.08□□□□□ -0.48
DKC1-213ENST00000620277 C9orf139Q6ZV77 190 aa12.08□□□□□ -0.48
DKC1-213ENST00000620277 IGHV4-39P01824 125 aa12.07□□□□□ -0.48
DKC1-213ENST00000620277 PSMG4Q5JS54 123 aa12.07□□□□□ -0.48
DKC1-213ENST00000620277 NEXN-AS1Q8NBZ9 246 aa12.07□□□□□ -0.48
DKC1-213ENST00000620277 PIFOQ8TCI5 191 aa12.07□□□□□ -0.48
DKC1-213ENST00000620277 MDFICQ9P1T7 246 aa12.07□□□□□ -0.48
DKC1-213ENST00000620277 SCGB1C2P0DMR2 95 aa12.07□□□□□ -0.48
DKC1-213ENST00000620277 GNLYP22749 145 aa12.07□□□□□ -0.48
DKC1-213ENST00000620277 NBL1P41271 181 aa12.07□□□□□ -0.48
DKC1-213ENST00000620277 BEX4Q9NWD9 120 aaPredicted RBP12.07□□□□□ -0.48
DKC1-213ENST00000620277 NPC2P61916 151 aa12.07□□□□□ -0.48
DKC1-213ENST00000620277 SIGMAR1Q99720 223 aa12.07□□□□□ -0.48
DKC1-213ENST00000620277 TOMM6Q96B49 74 aa12.06□□□□□ -0.48
DKC1-213ENST00000620277 ZNF580Q9UK33 172 aa12.06□□□□□ -0.48
DKC1-213ENST00000620277 TRBV7-3A0A075B6L6 115 aa12.06□□□□□ -0.48
DKC1-213ENST00000620277 SPINK13Q1W4C9 94 aa12.06□□□□□ -0.48
DKC1-213ENST00000620277 MORN3Q6PF18 240 aaPredicted RBP12.06□□□□□ -0.48
DKC1-213ENST00000620277 CLEC2AQ6UVW9 174 aa12.06□□□□□ -0.48
DKC1-213ENST00000620277 MTORP42345 2549 aa12.05□□□□□ -0.48
DKC1-213ENST00000620277 MRAP2Q96G30 205 aa12.05□□□□□ -0.48
DKC1-213ENST00000620277 KNCNA6PVL3 124 aa12.05□□□□□ -0.48
DKC1-213ENST00000620277 SRSF2Q01130 221 aaKnown RBP12.05□□□□□ -0.48
DKC1-213ENST00000620277 SUMO4Q6EEV6 95 aa12.05□□□□□ -0.48
DKC1-213ENST00000620277 ITLN2Q8WWU7 325 aaPredicted RBP12.05□□□□□ -0.48
DKC1-213ENST00000620277 SDHAF1A6NFY7 115 aa12.05□□□□□ -0.48
DKC1-213ENST00000620277 TSPEAR-AS2P59090 65 aa12.05□□□□□ -0.48
DKC1-213ENST00000620277 IGHV1-69DA0A0B4J2H0 117 aa12.04□□□□□ -0.48
DKC1-213ENST00000620277 TSHBP01222 138 aa12.04□□□□□ -0.48
DKC1-213ENST00000620277 IGHV1-69P01742 117 aa12.04□□□□□ -0.48
DKC1-213ENST00000620277 CRYGDP07320 174 aa12.04□□□□□ -0.48
DKC1-213ENST00000620277 CEMP1Q6PRD7 247 aaPredicted RBP12.04□□□□□ -0.48
DKC1-213ENST00000620277 U3KQE9 123 aa12.04□□□□□ -0.48
DKC1-213ENST00000620277 RNF223E7ERA6 249 aa12.03□□□□□ -0.48
DKC1-213ENST00000620277 P0DMU3 169 aa12.03□□□□□ -0.48
DKC1-213ENST00000620277 FAM231AP0DMU4 169 aa12.03□□□□□ -0.48
DKC1-213ENST00000620277 FAM231CP0DMU5 169 aa12.03□□□□□ -0.48
DKC1-213ENST00000620277 IGSF10Q6WRI0 2623 aa12.03□□□□□ -0.48
DKC1-213ENST00000620277 ZNF462Q96JM2 2506 aa12.03□□□□□ -0.48
DKC1-213ENST00000620277 LINC01546A6NGU7 62 aa12.02□□□□□ -0.49
DKC1-213ENST00000620277 AVPP01185 164 aa12.02□□□□□ -0.49
DKC1-213ENST00000620277 FN1P02751 2386 aaKnown RBP12.02□□□□□ -0.49
DKC1-213ENST00000620277 TRAV2A0A0B4J234 112 aa12.02□□□□□ -0.49
DKC1-213ENST00000620277 OVOL1O14753 267 aa12.02□□□□□ -0.49
DKC1-213ENST00000620277 SYT8Q8NBV8 401 aa12.02□□□□□ -0.49
DKC1-213ENST00000620277 KIR2DL4Q99706 377 aa12.02□□□□□ -0.49
DKC1-213ENST00000620277 F8W1H4 67 aa12.01□□□□□ -0.49
DKC1-213ENST00000620277 NDUFS8O00217 210 aa12.01□□□□□ -0.49
DKC1-213ENST00000620277 PROK1P58294 105 aa12.01□□□□□ -0.49
DKC1-213ENST00000620277 ATP5J2P56134 94 aa12.01□□□□□ -0.49
DKC1-213ENST00000620277 ACANP16112 2415 aa12.01□□□□□ -0.49
DKC1-213ENST00000620277 IGHV4-30-2A0A087WSY4 118 aa12□□□□□ -0.49
DKC1-213ENST00000620277 TSPAN13O95857 204 aa12□□□□□ -0.49
DKC1-213ENST00000620277 ZNRF2Q8NHG8 242 aa12□□□□□ -0.49
DKC1-213ENST00000620277 DUX3Q96PT4 197 aa12□□□□□ -0.49
DKC1-213ENST00000620277 DOPEY1Q5JWR5 2465 aa12□□□□□ -0.49
DKC1-213ENST00000620277 Q9UF83 564 aa12□□□□□ -0.49
DKC1-213ENST00000620277 J3QR89 54 aa12□□□□□ -0.49
DKC1-213ENST00000620277 NDUFA4O00483 81 aa12□□□□□ -0.49
DKC1-213ENST00000620277 PRSS2P07478 247 aa12□□□□□ -0.49
DKC1-213ENST00000620277 NFE4Q86UQ8 179 aa12□□□□□ -0.49
DKC1-213ENST00000620277 SYNJ2BPP57105 145 aa11.99□□□□□ -0.49
DKC1-213ENST00000620277 FAM223BA6NKX1 122 aa11.99□□□□□ -0.49
DKC1-213ENST00000620277 A8MZ25 164 aa11.99□□□□□ -0.49
DKC1-213ENST00000620277 SMCPP49901 116 aaPredicted RBP11.99□□□□□ -0.49
DKC1-213ENST00000620277 Q1RN00 199 aa11.99□□□□□ -0.49
DKC1-213ENST00000620277 FAM223AQ8IWN6 122 aa11.99□□□□□ -0.49
DKC1-213ENST00000620277 DAZ1Q9NQZ3 744 aaKnown RBP11.99□□□□□ -0.49
DKC1-213ENST00000620277 IGHV4-4A0A075B6R2 117 aa11.98□□□□□ -0.49
DKC1-213ENST00000620277 SOCS3O14543 225 aa11.98□□□□□ -0.49
DKC1-213ENST00000620277 SPXQ9BT56 116 aa11.98□□□□□ -0.49
DKC1-213ENST00000620277 IGLV4-69A0A075B6H9 119 aa11.98□□□□□ -0.49
DKC1-213ENST00000620277 Q8N1Y9 231 aa11.98□□□□□ -0.49
DKC1-213ENST00000620277 TRAV12-1A0A0B4J245 112 aa11.97□□□□□ -0.49
DKC1-213ENST00000620277 IGHV4-59P01825 116 aa11.97□□□□□ -0.49
DKC1-213ENST00000620277 DEFB136Q30KP8 78 aa11.97□□□□□ -0.49
DKC1-213ENST00000620277 TRPT1Q86TN4 253 aaKnown RBP11.97□□□□□ -0.49
DKC1-213ENST00000620277 TMEM190Q8WZ59 177 aa11.97□□□□□ -0.49
DKC1-213ENST00000620277 A0A0J9YXV3 536 aa11.97□□□□□ -0.49
DKC1-213ENST00000620277 A0A0U1RRA0 63 aa11.97□□□□□ -0.49
DKC1-213ENST00000620277 MRPL53Q96EL3 112 aaKnown RBP11.97□□□□□ -0.49
DKC1-213ENST00000620277 TCL1BO95988 128 aa11.96□□□□□ -0.49
DKC1-213ENST00000620277 LGALS3P17931 250 aaKnown RBP11.96□□□□□ -0.49
DKC1-213ENST00000620277 LINC00315P59091 139 aa11.96□□□□□ -0.49
DKC1-213ENST00000620277 ZNF876PQ49A33 203 aa11.96□□□□□ -0.49
DKC1-213ENST00000620277 PMVKQ15126 192 aa11.96□□□□□ -0.5
DKC1-213ENST00000620277 DLX4Q92988 240 aaPredicted RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms