RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 KLK9Q2XQG4 91 aa6.56□□□□□ -1.36
C9orf72-206ENST00000619707 KLK9Q9UKQ9 250 aa6.56□□□□□ -1.36
C9orf72-206ENST00000619707 CACNA1HO95180 2353 aa6.56□□□□□ -1.36
C9orf72-206ENST00000619707 ABCA4P78363 2273 aa6.56□□□□□ -1.36
C9orf72-206ENST00000619707 TMEM89A2RUT3 159 aa6.56□□□□□ -1.36
C9orf72-206ENST00000619707 RPL39P62891 51 aaKnown RBP6.56□□□□□ -1.36
C9orf72-206ENST00000619707 Q8NA96 180 aa6.56□□□□□ -1.36
C9orf72-206ENST00000619707 RETNQ9HD89 108 aa6.56□□□□□ -1.36
C9orf72-206ENST00000619707 ACACAQ13085 2346 aa6.55□□□□□ -1.36
C9orf72-206ENST00000619707 CSMD1Q96PZ7 3565 aa6.55□□□□□ -1.36
C9orf72-206ENST00000619707 H7C2G1 150 aa6.55□□□□□ -1.36
C9orf72-206ENST00000619707 SNCGO76070 127 aa6.55□□□□□ -1.36
C9orf72-206ENST00000619707 TIMM17AQ99595 171 aa6.55□□□□□ -1.36
C9orf72-206ENST00000619707 CACNA1BQ00975 2339 aa6.55□□□□□ -1.36
C9orf72-206ENST00000619707 VCYO14598 125 aa6.55□□□□□ -1.36
C9orf72-206ENST00000619707 GAGE2BQ13066 116 aa6.55□□□□□ -1.36
C9orf72-206ENST00000619707 GAGE2EQ4V326 116 aa6.55□□□□□ -1.36
C9orf72-206ENST00000619707 TRPT1Q86TN4 253 aaKnown RBP6.55□□□□□ -1.36
C9orf72-206ENST00000619707 GAGE2DQ9UEU5 116 aa6.55□□□□□ -1.36
C9orf72-206ENST00000619707 OTOGLQ3ZCN5 2332 aa6.55□□□□□ -1.36
C9orf72-206ENST00000619707 RNASE3P12724 160 aaKnown RBP6.55□□□□□ -1.36
C9orf72-206ENST00000619707 DEFB1P60022 68 aa6.55□□□□□ -1.36
C9orf72-206ENST00000619707 Q1RN00 199 aa6.55□□□□□ -1.36
C9orf72-206ENST00000619707 PRR30Q53SZ7 412 aaPredicted RBP6.55□□□□□ -1.36
C9orf72-206ENST00000619707 ZNRF2Q8NHG8 242 aa6.55□□□□□ -1.36
C9orf72-206ENST00000619707 IGHV4OR15-8A0A075B7B6 117 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 A0A087WW49 117 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 F5H697 171 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 SRD5A1P18405 259 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 KIR2DL5BQ8NHK3 375 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 GVINP1Q7Z2Y8 2422 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 TRAV2A0A0B4J234 112 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 LOC107984640A0A0U1RRK4 108 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 IGHV3-33P01772 117 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 CRIP2P52943 208 aaPredicted RBP6.54□□□□□ -1.36
C9orf72-206ENST00000619707 POLR2KP53803 58 aaKnown RBP6.54□□□□□ -1.36
C9orf72-206ENST00000619707 RPL11P62913 178 aaKnown RBP6.54□□□□□ -1.36
C9orf72-206ENST00000619707 ZNF876PQ49A33 203 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 HIST2H2BCQ6DN03 193 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 HIST2H2BDQ6DRA6 164 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 POM121L12Q8N7R1 296 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 C3orf56Q8N813 242 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 AJUBAQ96IF1 538 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 PIEZO2Q9H5I5 2752 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 LAMA5O15230 3695 aa6.54□□□□□ -1.36
C9orf72-206ENST00000619707 ANKHD1Q8IWZ3 2542 aaKnown RBP6.53□□□□□ -1.36
C9orf72-206ENST00000619707 RHODO00212 210 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 SUMO4Q6EEV6 95 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 AMELXQ99217 191 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 SDHAF1A6NFY7 115 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 ZFP36P26651 326 aaKnown RBP6.53□□□□□ -1.36
C9orf72-206ENST00000619707 GRNP28799 593 aaKnown RBP6.53□□□□□ -1.36
C9orf72-206ENST00000619707 IL17DQ8TAD2 202 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 MRAPQ8TCY5 172 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 NTN5Q8WTR8 489 aaPredicted RBP6.53□□□□□ -1.36
C9orf72-206ENST00000619707 TMEM263Q8WUH6 116 aaKnown RBP6.53□□□□□ -1.36
C9orf72-206ENST00000619707 KIF25-AS1Q9Y6Z4 181 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 A0A0B4J2C4 111 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 TINCRA0A1B0GVN0 87 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 F6UB75 175 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 NXPH4O95158 308 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 P0DMU3 169 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 FAM231AP0DMU4 169 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 FAM231CP0DMU5 169 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 LINC00315P59091 139 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 ZNF415Q09FC8 603 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 ATXN8Q156A1 80 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 TTC32Q5I0X7 151 aa6.53□□□□□ -1.36
C9orf72-206ENST00000619707 ANKRD11Q6UB99 2663 aaPredicted RBP6.52□□□□□ -1.36
C9orf72-206ENST00000619707 A0A087WWL8 130 aa6.52□□□□□ -1.37
C9orf72-206ENST00000619707 LEPROTO15243 131 aa6.52□□□□□ -1.37
C9orf72-206ENST00000619707 RPL35AP18077 110 aaKnown RBP6.52□□□□□ -1.37
C9orf72-206ENST00000619707 SAA4P35542 130 aa6.52□□□□□ -1.37
C9orf72-206ENST00000619707 NDUFV3P56181 108 aaKnown RBP6.52□□□□□ -1.37
C9orf72-206ENST00000619707 DMXL1Q9Y485 3027 aa6.52□□□□□ -1.37
C9orf72-206ENST00000619707 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.52□□□□□ -1.37
C9orf72-206ENST00000619707 UBE2E1P51965 193 aa6.52□□□□□ -1.37
C9orf72-206ENST00000619707 FAM159AQ6UWV7 190 aa6.52□□□□□ -1.37
C9orf72-206ENST00000619707 Q8N1Y9 231 aa6.52□□□□□ -1.37
C9orf72-206ENST00000619707 JPT2Q9H910 190 aa6.52□□□□□ -1.37
C9orf72-206ENST00000619707 IGKV3-7A0A075B6H7 116 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 TRAV4A0A0B4J268 109 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 FAM223BA6NKX1 122 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 SOCS3O14543 225 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 IGHV4-39P01824 125 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 NHLRC4P0CG21 123 aaPredicted RBP6.51□□□□□ -1.37
C9orf72-206ENST00000619707 LINC01620Q4KN68 170 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 UNQ9165/PRO28630Q6UXU0 137 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 MUSTN1Q8IVN3 82 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 FAM223AQ8IWN6 122 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 FAM19A4Q96LR4 140 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 ZNF256Q9Y2P7 627 aaPredicted RBP6.51□□□□□ -1.37
C9orf72-206ENST00000619707 IGHV3-64A0A075B6Q5 118 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 TRAV8-4A0A0B4J246 113 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 TRAV41A0A0B4J266 112 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 GAGE12JA6NER3 117 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 GAGE7O76087 117 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 GAGE12FP0CL80 117 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 GAGE12GP0CL81 117 aa6.51□□□□□ -1.37
C9orf72-206ENST00000619707 GAGE12IP0CL82 117 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms