RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	FAM223B	A6NKX1	122 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644	SLC25A16	P16260	332 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644	FAM223A	Q8IWN6	122 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644	PRSS29P	A6NIE9	313 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644	KLHL30-AS1	Q8NEE0	82 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644	TOMM6	Q96B49	74 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644		U3KQE9	123 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644	NOTCH3	Q9UM47	2321 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644	TRAV12-3	A0A0B4J271	114 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644	IGHV1-69D	A0A0B4J2H0	117 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644	OVOL1	O14753	267 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644	IGHV1-69	P01742	117 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644	IGHV4-39	P01824	125 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644	TMEM95	Q3KNT9	176 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644	GPHB5	Q86YW7	130 aa		10.92	□□□□□ -0.66
SMTN-223	ENST00000619644	IGHV4-61	A0A0C4DH41	118 aa		10.91	□□□□□ -0.66
SMTN-223	ENST00000619644	TCL1B	O95988	128 aa		10.91	□□□□□ -0.66
SMTN-223	ENST00000619644	TGFA	P01135	160 aa		10.91	□□□□□ -0.66
SMTN-223	ENST00000619644	FAM159A	Q6UWV7	190 aa		10.91	□□□□□ -0.66
SMTN-223	ENST00000619644	BAALC	Q8WXS3	180 aa		10.91	□□□□□ -0.66
SMTN-223	ENST00000619644	POLQ	O75417	2590 aa		10.91	□□□□□ -0.66
SMTN-223	ENST00000619644	DUSP14	O95147	198 aa	Known RBP	10.91	□□□□□ -0.66
SMTN-223	ENST00000619644	CD7	P09564	240 aa		10.91	□□□□□ -0.66
SMTN-223	ENST00000619644	GNLY	P22749	145 aa		10.9	□□□□□ -0.66
SMTN-223	ENST00000619644	KIR2DL4	Q99706	377 aa		10.9	□□□□□ -0.66
SMTN-223	ENST00000619644	ANAPC13	Q9BS18	74 aa		10.9	□□□□□ -0.66
SMTN-223	ENST00000619644	SS18L2	Q9UHA2	77 aa		10.9	□□□□□ -0.66
SMTN-223	ENST00000619644	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.9	□□□□□ -0.66
SMTN-223	ENST00000619644	HTN1	P15515	57 aa		10.9	□□□□□ -0.66
SMTN-223	ENST00000619644	LYRM7	Q5U5X0	104 aa		10.9	□□□□□ -0.66
SMTN-223	ENST00000619644	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.9	□□□□□ -0.66
SMTN-223	ENST00000619644	CACNA1A	O00555	2505 aa		10.9	□□□□□ -0.67
SMTN-223	ENST00000619644	COX6B1	P14854	86 aa		10.9	□□□□□ -0.67
SMTN-223	ENST00000619644	NDUFA4	O00483	81 aa		10.89	□□□□□ -0.67
SMTN-223	ENST00000619644	RPL39	P62891	51 aa	Known RBP	10.89	□□□□□ -0.67
SMTN-223	ENST00000619644	NDUFA11	Q86Y39	141 aa		10.89	□□□□□ -0.67
SMTN-223	ENST00000619644	TRAV12-2	A0A075B6T6	113 aa		10.89	□□□□□ -0.67
SMTN-223	ENST00000619644		A8MWV9	139 aa		10.89	□□□□□ -0.67
SMTN-223	ENST00000619644	ZNF688	P0C7X2	276 aa		10.89	□□□□□ -0.67
SMTN-223	ENST00000619644	TMEM170B	Q5T4T1	132 aa		10.89	□□□□□ -0.67
SMTN-223	ENST00000619644	TP53TG1	Q9Y2A0	90 aa		10.89	□□□□□ -0.67
SMTN-223	ENST00000619644	IGHV4-4	A0A075B6R2	117 aa		10.88	□□□□□ -0.67
SMTN-223	ENST00000619644	FAM208B	Q5VWN6	2430 aa		10.88	□□□□□ -0.67
SMTN-223	ENST00000619644	UTP20	O75691	2785 aa	Known RBP	10.88	□□□□□ -0.67
SMTN-223	ENST00000619644	ITPR1	Q14643	2758 aa		10.88	□□□□□ -0.67
SMTN-223	ENST00000619644	ANKRD29	Q8N6D5	301 aa		10.88	□□□□□ -0.67
SMTN-223	ENST00000619644	MYO18B	Q8IUG5	2567 aa		10.88	□□□□□ -0.67
SMTN-223	ENST00000619644	MUC4	Q99102	2169 aa		10.88	□□□□□ -0.67
SMTN-223	ENST00000619644	RNASE3	P12724	160 aa	Known RBP	10.88	□□□□□ -0.67
SMTN-223	ENST00000619644	VCX2	Q9H322	139 aa		10.88	□□□□□ -0.67
SMTN-223	ENST00000619644	CUBN	O60494	3623 aa		10.88	□□□□□ -0.67
SMTN-223	ENST00000619644	ZFAND6	Q6FIF0	208 aa		10.87	□□□□□ -0.67
SMTN-223	ENST00000619644	LENEP	Q9Y5L5	61 aa		10.87	□□□□□ -0.67
SMTN-223	ENST00000619644	FLNC	Q14315	2725 aa		10.87	□□□□□ -0.67
SMTN-223	ENST00000619644	ACACB	O00763	2458 aa		10.87	□□□□□ -0.67
SMTN-223	ENST00000619644	ATP5J2	P56134	94 aa		10.86	□□□□□ -0.67
SMTN-223	ENST00000619644	SBSPON	Q8IVN8	264 aa		10.86	□□□□□ -0.67
SMTN-223	ENST00000619644	PIMREG	Q9BSJ6	248 aa		10.86	□□□□□ -0.67
SMTN-223	ENST00000619644	TRBV20-1	A0A075B6N2	111 aa		10.86	□□□□□ -0.67
SMTN-223	ENST00000619644	IGHV3-64	A0A075B6Q5	118 aa		10.86	□□□□□ -0.67
SMTN-223	ENST00000619644	ZNF56	Q15929	161 aa		10.86	□□□□□ -0.67
SMTN-223	ENST00000619644	TEX29	Q8N6K0	151 aa		10.86	□□□□□ -0.67
SMTN-223	ENST00000619644	DUX5	Q96PT3	197 aa		10.86	□□□□□ -0.67
SMTN-223	ENST00000619644	CCL19	Q99731	98 aa		10.86	□□□□□ -0.67
SMTN-223	ENST00000619644	DAZ1	Q9NQZ3	744 aa	Known RBP	10.86	□□□□□ -0.67
SMTN-223	ENST00000619644		A0A0J9YY99	117 aa		10.85	□□□□□ -0.67
SMTN-223	ENST00000619644	CSMD2	Q7Z408	3487 aa		10.85	□□□□□ -0.67
SMTN-223	ENST00000619644	CFC1B	P0CG36	223 aa		10.85	□□□□□ -0.67
SMTN-223	ENST00000619644	CFC1	P0CG37	223 aa		10.85	□□□□□ -0.67
SMTN-223	ENST00000619644	SCGB1C2	P0DMR2	95 aa		10.85	□□□□□ -0.67
SMTN-223	ENST00000619644	USP9X	Q93008	2570 aa	Predicted RBP	10.84	□□□□□ -0.67
SMTN-223	ENST00000619644	GAGE5	Q13069	117 aa		10.84	□□□□□ -0.67
SMTN-223	ENST00000619644	GAGE6	Q13070	117 aa		10.84	□□□□□ -0.67
SMTN-223	ENST00000619644	C10orf99	Q6UWK7	81 aa		10.84	□□□□□ -0.67
SMTN-223	ENST00000619644	KLK9	Q9UKQ9	250 aa		10.84	□□□□□ -0.67
SMTN-223	ENST00000619644	C11orf86	A6NJI1	115 aa		10.84	□□□□□ -0.67
SMTN-223	ENST00000619644	USMG5	Q96IX5	58 aa		10.84	□□□□□ -0.67
SMTN-223	ENST00000619644	RNF223	E7ERA6	249 aa		10.84	□□□□□ -0.67
SMTN-223	ENST00000619644	SOCS3	O14543	225 aa		10.84	□□□□□ -0.67
SMTN-223	ENST00000619644	SUMO4	Q6EEV6	95 aa		10.84	□□□□□ -0.67
SMTN-223	ENST00000619644	C10orf126	Q8N4M7	172 aa		10.84	□□□□□ -0.67
SMTN-223	ENST00000619644	ZAN	Q9Y493	2812 aa		10.83	□□□□□ -0.68
SMTN-223	ENST00000619644	SDHAF1	A6NFY7	115 aa		10.83	□□□□□ -0.68
SMTN-223	ENST00000619644		B5MCH6	92 aa		10.83	□□□□□ -0.68
SMTN-223	ENST00000619644	TMEM262	E9PQX1	116 aa		10.83	□□□□□ -0.68
SMTN-223	ENST00000619644	CRYGD	P07320	174 aa		10.83	□□□□□ -0.68
SMTN-223	ENST00000619644	PKD1L2	Q7Z442	2459 aa		10.83	□□□□□ -0.68
SMTN-223	ENST00000619644	ID1	P41134	155 aa		10.83	□□□□□ -0.68
SMTN-223	ENST00000619644	OPRPN	Q99935	248 aa	Predicted RBP	10.83	□□□□□ -0.68
SMTN-223	ENST00000619644	CITED1	Q99966	193 aa		10.83	□□□□□ -0.68
SMTN-223	ENST00000619644	MYO9A	B2RTY4	2548 aa		10.83	□□□□□ -0.68
SMTN-223	ENST00000619644	IGHV4-30-2	A0A087WSY4	118 aa		10.82	□□□□□ -0.68
SMTN-223	ENST00000619644	IGHV3-30	P01768	117 aa		10.82	□□□□□ -0.68
SMTN-223	ENST00000619644	IGHV3-30-5	P0DP03	117 aa		10.82	□□□□□ -0.68
SMTN-223	ENST00000619644	IGLV4-69	A0A075B6H9	119 aa		10.82	□□□□□ -0.68
SMTN-223	ENST00000619644		H7C2G1	150 aa		10.82	□□□□□ -0.68
SMTN-223	ENST00000619644	IGHG2	P01859	326 aa		10.82	□□□□□ -0.68
SMTN-223	ENST00000619644	HERVK_113	P61574	105 aa		10.82	□□□□□ -0.68
SMTN-223	ENST00000619644	NACA	E9PAV3	2078 aa		10.82	□□□□□ -0.68
SMTN-223	ENST00000619644	TSPEAR-AS2	P59090	65 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms