RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 PHLDA2Q53GA4 152 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 PSMG4Q5JS54 123 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 RASL11AQ6T310 242 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 BAGE3Q86Y29 109 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 BAGE2Q86Y30 109 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 PLEKHB2Q96CS7 222 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 C20orf78Q9BR46 151 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 TMEM191AQ9H0A3 160 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 S4R3C0 116 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 VPS13DQ5THJ4 4388 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 DNAH6Q9C0G6 4158 aa6.29□□□□□ -1.4
GPC6-202ENST00000617456 C3orf85A0A1B0GTC6 90 aa6.29□□□□□ -1.4
GPC6-202ENST00000617456 E9PLD3 99 aa6.29□□□□□ -1.4
GPC6-202ENST00000617456 ATP5G1P05496 136 aa6.29□□□□□ -1.4
GPC6-202ENST00000617456 IGLC6P0CF74 106 aa6.29□□□□□ -1.4
GPC6-202ENST00000617456 RPL35AP18077 110 aaKnown RBP6.29□□□□□ -1.4
GPC6-202ENST00000617456 ATP5G3P48201 142 aa6.29□□□□□ -1.4
GPC6-202ENST00000617456 WFDC2Q14508 124 aa6.29□□□□□ -1.4
GPC6-202ENST00000617456 KIR3DS1Q14943 382 aa6.29□□□□□ -1.4
GPC6-202ENST00000617456 TAL2Q16559 108 aa6.29□□□□□ -1.4
GPC6-202ENST00000617456 C4orf26Q17RF5 130 aa6.29□□□□□ -1.4
GPC6-202ENST00000617456 Q56UQ5 140 aa6.29□□□□□ -1.4
GPC6-202ENST00000617456 C2orf91Q6ZV80 131 aa6.29□□□□□ -1.4
GPC6-202ENST00000617456 OR10G8Q8NGN5 311 aa6.29□□□□□ -1.4
GPC6-202ENST00000617456 GNB1LQ9BYB4 327 aa6.29□□□□□ -1.4
GPC6-202ENST00000617456 IGHV7-4-1A0A0J9YVY3 117 aa6.28□□□□□ -1.4
GPC6-202ENST00000617456 M0R2P5 195 aa6.28□□□□□ -1.4
GPC6-202ENST00000617456 NMUP48645 174 aa6.28□□□□□ -1.4
GPC6-202ENST00000617456 NANOS2P60321 138 aaKnown RBP6.28□□□□□ -1.4
GPC6-202ENST00000617456 Q5XG85 94 aa6.28□□□□□ -1.4
GPC6-202ENST00000617456 MORN3Q6PF18 240 aaPredicted RBP6.28□□□□□ -1.4
GPC6-202ENST00000617456 TEPPQ6URK8 271 aa6.28□□□□□ -1.4
GPC6-202ENST00000617456 C1orf158Q8N1D5 194 aa6.28□□□□□ -1.4
GPC6-202ENST00000617456 STPG3Q8N7X2 389 aa6.28□□□□□ -1.4
GPC6-202ENST00000617456 PPDPFLQ8WWR9 84 aa6.28□□□□□ -1.4
GPC6-202ENST00000617456 KIR2DL4Q99706 377 aa6.28□□□□□ -1.4
GPC6-202ENST00000617456 NAA38Q9BRA0 125 aaKnown RBP6.28□□□□□ -1.4
GPC6-202ENST00000617456 TMEM222Q9H0R3 208 aa6.28□□□□□ -1.4
GPC6-202ENST00000617456 MUC4Q99102 2169 aa6.28□□□□□ -1.4
GPC6-202ENST00000617456 IGHV3-35A0A0C4DH35 117 aa6.27□□□□□ -1.41
GPC6-202ENST00000617456 M0QYG6 137 aa6.27□□□□□ -1.41
GPC6-202ENST00000617456 CHEK1O14757 476 aa6.27□□□□□ -1.41
GPC6-202ENST00000617456 DUSP14O95147 198 aaKnown RBP6.27□□□□□ -1.41
GPC6-202ENST00000617456 IGKV1-5P01602 117 aa6.27□□□□□ -1.41
GPC6-202ENST00000617456 OPRK1P41145 380 aa6.27□□□□□ -1.41
GPC6-202ENST00000617456 UBE2G1P62253 170 aa6.27□□□□□ -1.41
GPC6-202ENST00000617456 GAGE13Q4V321 117 aa6.27□□□□□ -1.41
GPC6-202ENST00000617456 DGAT2L7PQ6IED9 249 aa6.27□□□□□ -1.41
GPC6-202ENST00000617456 FAM19A1Q7Z5A9 133 aa6.27□□□□□ -1.41
GPC6-202ENST00000617456 BPIFA4PQ86YQ2 179 aa6.27□□□□□ -1.41
GPC6-202ENST00000617456 LINC00526Q96FQ7 95 aa6.27□□□□□ -1.41
GPC6-202ENST00000617456 PRELID3AQ96N28 172 aa6.27□□□□□ -1.41
GPC6-202ENST00000617456 RHPN1-AS1Q9BWJ2 59 aa6.27□□□□□ -1.41
GPC6-202ENST00000617456 VSIRQ9H7M9 311 aa6.27□□□□□ -1.41
GPC6-202ENST00000617456 TRAV5A0A0B4J249 113 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 LOC107984640A0A0U1RRK4 108 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 UQCRQO14949 82 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 SMIM13P0DJ93 91 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 ODF3L2Q3SX64 289 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 ETDBQ3ZM63 59 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 LINC01620Q4KN68 170 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 NMSQ5H8A3 153 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 IBA57Q5T440 356 aaKnown RBP6.26□□□□□ -1.41
GPC6-202ENST00000617456 C1orf195Q5TG92 126 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 C11orf45Q8TAV5 145 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 ZNF414Q96IQ9 312 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 LINC00477Q96M19 166 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 LINC01600Q96MT4 127 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 SMIM7Q9BQ49 75 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 MAP6D1Q9H9H5 199 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 PKHD1P08F94 4074 aa6.26□□□□□ -1.41
GPC6-202ENST00000617456 APOMO95445 188 aa6.25□□□□□ -1.41
GPC6-202ENST00000617456 RNASE2P10153 161 aaKnown RBP6.25□□□□□ -1.41
GPC6-202ENST00000617456 C2orf83Q53S99 150 aa6.25□□□□□ -1.41
GPC6-202ENST00000617456 GOLT1AQ6ZVE7 132 aa6.25□□□□□ -1.41
GPC6-202ENST00000617456 STHQ8IWL8 128 aa6.25□□□□□ -1.41
GPC6-202ENST00000617456 TMEM70Q9BUB7 260 aa6.25□□□□□ -1.41
GPC6-202ENST00000617456 IMUPQ9GZP8 106 aa6.25□□□□□ -1.41
GPC6-202ENST00000617456 MRPL18Q9H0U6 180 aaKnown RBP6.25□□□□□ -1.41
GPC6-202ENST00000617456 NAA60Q9H7X0 242 aa6.25□□□□□ -1.41
GPC6-202ENST00000617456 IGHV3-21A0A0B4J1V1 117 aa6.24□□□□□ -1.41
GPC6-202ENST00000617456 CRYM-AS1A6NIL9 109 aa6.24□□□□□ -1.41
GPC6-202ENST00000617456 IGLL5B9A064 214 aa6.24□□□□□ -1.41
GPC6-202ENST00000617456 DEFB4AO15263 64 aa6.24□□□□□ -1.41
GPC6-202ENST00000617456 ATP5LO75964 103 aa6.24□□□□□ -1.41
GPC6-202ENST00000617456 OR5AL1P0C617 328 aa6.24□□□□□ -1.41
GPC6-202ENST00000617456 ZNF688P0C7X2 276 aa6.24□□□□□ -1.41
GPC6-202ENST00000617456 NPPCP23582 126 aa6.24□□□□□ -1.41
GPC6-202ENST00000617456 HERVK_113P63121 156 aa6.24□□□□□ -1.41
GPC6-202ENST00000617456 TRPT1Q86TN4 253 aaKnown RBP6.24□□□□□ -1.41
GPC6-202ENST00000617456 C3orf22Q8N5N4 141 aa6.24□□□□□ -1.41
GPC6-202ENST00000617456 TSKUQ8WUA8 353 aa6.24□□□□□ -1.41
GPC6-202ENST00000617456 SLC25A39Q9BZJ4 359 aaPredicted RBP6.24□□□□□ -1.41
GPC6-202ENST00000617456 HIGD1BQ9P298 99 aa6.24□□□□□ -1.41
GPC6-202ENST00000617456 ABCA13Q86UQ4 5058 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 MPDU1O75352 247 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 SNCGO76070 127 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 MED14OSP0DP75 135 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 CRYGAP11844 174 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 PI3P19957 117 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms